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Pentose phosphate pathway

SourceIDPathway
KEGG00030 Map00030

Pathway Metabolites

YMDB ID Name
CAS Number
IUPAC Name Formula
Weight
Structure
YMDB00061Ribose 1-phosphate
14075-00-4
{[(2R,3R,4S,5R)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}phosphonic acidC5H11O8P
230.1098
Thumb
YMDB00115D-Glyceraldehyde 3-phosphate
142-10-9
(2-hydroxy-3-oxopropoxy)phosphonic acidC3H7O6P
170.0578
Thumb
YMDB00119D-Ribose 5-phosphate
3615-55-2
{[(2R,3S,4R)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acidC5H11O8P
230.1098
Thumb
YMDB001406-Phosphonoglucono-D-lactone
2641-81-8
{[(2R,3S,4S,5R)-3,4,5-trihydroxy-6-oxooxan-2-yl]methoxy}phosphonic acidC6H11O9P
258.1199
Thumb
YMDB00146Beta-D-Glucose
492-61-5
(2R,3R,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrolC6H12O6
180.1559
Thumb
YMDB00175Pyruvic acid
127-17-3
2-oxopropanoic acidC3H4O3
88.0621
Thumb
YMDB002186-Phosphogluconic acid
921-62-0
(2R,3S,4R,5R)-2,3,4,5-tetrahydroxy-6-(phosphonooxy)hexanoic acidC6H13O10P
276.1352
Thumb
YMDB00223D-Erythrose 4-phosphate
585-18-2
[(2R,3R)-2,3-dihydroxy-4-oxobutoxy]phosphonic acidC4H9O7P
200.0838
Thumb
YMDB00253D-Ribose
50-69-1
(3R,4S,5R)-5-(hydroxymethyl)oxolane-2,3,4-triolC5H10O5
150.1299
Thumb
YMDB00286D-Glucose
50-99-7
(3R,4S,5S,6R)-6-(hydroxymethyl)oxane-2,3,4,5-tetrolC6H12O6
180.1559
Thumb
YMDB00311Beta-D-Glucose 6-phosphate{[(2R,3S,4S,5R,6R)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy}phosphonic acidC6H13O9P
260.1358
Thumb
YMDB00362Xylulose 5-phosphate
4212-65-1
{[(2R,3S)-2,3,5-trihydroxy-4-oxopentyl]oxy}phosphonic acidC5H11O8P
230.1098
Thumb
YMDB00383Gluconic acid
526-95-4
(2R,3S,4R,5R)-2,3,4,5,6-pentahydroxyhexanoic acidC6H12O7
196.1553
Thumb
YMDB00402Phosphoribosyl pyrophosphate
7540-64-9
[({[(2R,3R,4S,5R)-3,4-dihydroxy-5-[(phosphonooxy)methyl]oxolan-2-yl]oxy}(hydroxy)phosphoryl)oxy]phosphonic acidC5H13O14P3
390.0696
Thumb
YMDB00575D-glyceraldehyde
453-17-8
(2R)-2,3-dihydroxypropanalC3H6O3
90.0779
Thumb
YMDB00650alpha-D-ribose 5-phosphate
4300-28-1
{[(2R,3S,4R,5S)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acidC5H11O8P
230.1098
Thumb
YMDB006612-deoxy-D-ribose
533-67-5
(3S,4R)-3,4,5-trihydroxypentanalC5H10O4
134.1305
Thumb
YMDB006622-deoxy-D-ribose 5-phosphate
102916-66-5
{[(2R,3S,5R)-3,5-dihydroxyoxolan-2-yl]methoxy}phosphonic acidC5H11O7P
214.1104
Thumb
YMDB006632-deoxy-D-ribofuranose 1-phosphate
17210-42-3
{[(4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy}phosphonic acidC5H11O7P
214.1104
Thumb
YMDB006752-phospho-D-glyceric acid(2R)-3-hydroxy-2-(phosphonooxy)propanoic acidC3H7O7P
186.0572
Thumb
YMDB00827D-gluconate
59625-89-7
(2R,3S,4R,5R)-2,3,4,5,6-pentahydroxyhexanoateC6H11O7
195.1473
Thumb
YMDB008506-phospho-2-dehydro-D-gluconic acid(3S,4R,5R)-3,4,5-trihydroxy-2-oxo-6-(phosphonooxy)hexanoic acidC6H11O10P
274.1193
Thumb
YMDB00947Glucose 6-phosphate
56-73-5
{[(2R,3S,4S,5R)-3,4,5,6-tetrahydroxyoxan-2-yl]methoxy}phosphonic acidC6H13O9P
260.1358
Thumb
YMDB00948D-ribulose 5-phosphate
4151-19-3
{[(2R,3R)-2,3,5-trihydroxy-4-oxopentyl]oxy}phosphonic acidC5H11O8P
230.1098
Thumb
YMDB00975gluconate
526-95-4
(2R,3S,4R,5R)-2,3,4,5,6-pentahydroxyhexanoic acidC6H12O7
196.1553
Thumb
YMDB009852-phospho-d-glycerate(2R)-3-hydroxy-2-(phosphonooxy)propanoic acidC3H7O7P
186.0572
Thumb
YMDB01053pyruvate
127-17-3
C3H3O3
87.0541
Thumb
YMDB010836-phospho-D-gluconate
2464-13-3
(2R,3S,4R,5R)-2,3,4,5-tetrahydroxy-6-(phosphonooxy)hexanoateC6H12O10P
275.1272
Thumb

Pathway Proteins

Uniprot ID Gene Name
Locus
Name Type Metabolites
P37012PGM2
YMR105C
Phosphoglucomutase-2Enzyme
P33401PGM1
YKL127W
Phosphoglucomutase-1Enzyme
P33315TKL2
YBR117C
Transketolase 2Enzyme
P53228NQM1
YGR043C
Transaldolase NQM1Enzyme
P16861PFK1
YGR240C
6-phosphofructokinase subunit alphaEnzyme
P16862PFK2
YMR205C
6-phosphofructokinase subunit betaEnzyme
P23254TKL1
YPR074C
Transketolase 1Enzyme
P09201FBP1
YLR377C
Fructose-1,6-bisphosphataseEnzyme
P12709PGI1
YBR196C
Glucose-6-phosphate isomeraseEnzyme
Q12265PRS5
YOL061W
Ribose-phosphate pyrophosphokinase 5Enzyme
P38620PRS2
YER099C
Ribose-phosphate pyrophosphokinase 2Enzyme
P32895PRS1
YKL181W
Ribose-phosphate pyrophosphokinase 1Enzyme
P38689PRS3
YHL011C
Ribose-phosphate pyrophosphokinase 3Enzyme
P14540FBA1
YKL060C
Fructose-bisphosphate aldolaseEnzyme
P25332RBK1
YCR036W
Probable ribokinaseEnzyme
Q03786
YDR248C
Probable gluconokinaseEnzyme
Q12189RKI1
YOR095C
Ribose-5-phosphate isomeraseEnzyme
P53315SOL4
YGR248W
6-phosphogluconolactonase 4Enzyme
P38720GND1
YHR183W
6-phosphogluconate dehydrogenase, decarboxylating 1Enzyme
P53319GND2
YGR256W
6-phosphogluconate dehydrogenase, decarboxylating 2Enzyme
Q03262
YMR278W
Phosphoglucomutase YMR278WEnzyme
P46969RPE1
YJL121C
Ribulose-phosphate 3-epimeraseEnzyme
P15019TAL1
TransaldolaseEnzyme
P11412ZWF1
YNL241C
Glucose-6-phosphate 1-dehydrogenaseEnzyme
P38063PRS4
YBL068W
Ribose-phosphate pyrophosphokinase 4Enzyme
P38858SOL3
YHR163W
6-phosphogluconolactonase 3Enzyme