{"ymdb_id":"YMDB16338","created_at":"2016-09-12T18:38:10.000Z","updated_at":"2016-10-17T22:34:45.000Z","name":"(glucosyl)3(mannosyl)9-(N-acetylglucosaminyl)2-diphosphodolichol","cas":null,"state":null,"melting_point":null,"description":null,"experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":null,"synthesis_reference":null,"chebi_id":null,"hmdb_id":null,"kegg_id":null,"pubchem_id":null,"cs_id":null,"foodb_id":null,"wikipedia_link":null,"biocyc_id":null,"iupac":"3,7,11,15,19,23,27,31,35,39,43,47,51,55,59,63-hexadecamethyltetrahexaconta-6,10,14,18,22,26,30,34,38,42,46,50,54,58,62-pentadecaen-1-yl [(5-{[5-({4-[(3-{[3-({4-[(4-{[4,5-dihydroxy-6-(hydroxymethyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl)oxy]-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl}oxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl)oxy]-6-{[(4-{[4,5-dihydroxy-6-(hydroxymethyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-6-({[4,5-dihydroxy-6-(hydroxymethyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}methyl)-3,5-dihydroxyoxan-2-yl)oxy]methyl}-3,5-dihydroxyoxan-2-yl}oxy)-3-acetamido-4-hydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3-acetamido-4-hydroxy-6-(hydroxymethyl)oxan-2-yl phosphonato)oxy]phosphonate","traditional_iupac":"3,7,11,15,19,23,27,31,35,39,43,47,51,55,59,63-hexadecamethyltetrahexaconta-6,10,14,18,22,26,30,34,38,42,46,50,54,58,62-pentadecaen-1-yl (5-{[5-({4-[(3-{[3-({4-[(4-{[4,5-dihydroxy-6-(hydroxymethyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl)oxy]-3,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl}oxy)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl)oxy]-6-{[(4-{[4,5-dihydroxy-6-(hydroxymethyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}-6-({[4,5-dihydroxy-6-(hydroxymethyl)-3-{[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}oxan-2-yl]oxy}methyl)-3,5-dihydroxyoxan-2-yl)oxy]methyl}-3,5-dihydroxyoxan-2-yl}oxy)-3-acetamido-4-hydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}-3-acetamido-4-hydroxy-6-(hydroxymethyl)oxan-2-yl phosphonato)oxyphosphonate","logp":"-0.19024455066666102","pka":"3.1917817362624117","alogps_solubility":"2.54e-01 g/l","alogps_logp":"2.76","alogps_logs":"-4.16","acceptor_count":"74","donor_count":"43","rotatable_bond_count":"95","polar_surface_area":"1244.7900000000004","refractivity":"878.9448000000039","polarizability":"385.83032138067745","formal_charge":"-2","physiological_charge":"-2","pka_strongest_basic":"-3.9542149685442736","pka_strongest_acidic":"1.7444953207594671","bioavailability":"0","number_of_rings":"14","rule_of_five":"0","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"1","synonyms":[],"pathways":[{"name":"N-Glycan biosynthesis","kegg_map_id":"00510"}],"growth_conditions":[],"references":[],"proteins":[{"created_at":"2011-05-27T06:18:50.000Z","updated_at":"2011-07-22T17:54:10.000Z","name":"Alpha-1,2 glucosyltransferase ALG10","uniprot_id":"P50076","uniprot_name":"ALG10_YEAST","enzyme":true,"transporter":false,"gene_name":"DIE2","num_residues":525,"molecular_weight":"61807.0","theoretical_pi":"9.75","general_function":"Involved in transferase activity, transferring hexosyl groups","specific_function":"Adds the third glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation. Transfers glucose from dolichyl phosphate glucose (Dol-P-Glc) onto the lipid-linked oligosaccharide Glc(2)Man(9)GlcNAc(2)-PP-Dol","reactions":[{"id":1316,"direction":"\u003c\u003e","locations":"endoplasmic reticulum","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":14883,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R007074","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"36-56;95-115;128-148;151-171;188-208;214-234;257-277;295-315;334-354;376-396;424-444;448-468;493-513","pdb_id":null,"cellular_location":"Endoplasmic reticulum membrane; Multi-pass membrane protein","genbank_gene_id":"D38049","genbank_protein_id":"902940","gene_card_id":"DIE2","chromosome_location":"chromosome 7","locus":"YGR227W","synonyms":["Alpha-2-glucosyltransferase ALG10","Asparagine-linked glycosylation protein 10","Dolichyl-phosphoglucose-dependent glucosyltransferase ALG10"],"enzyme_classes":["2.4.1.-"],"go_classes":[{"category":"Component","description":" cell part"},{"category":"Component","description":" membrane part"},{"category":"Component","description":" intrinsic to membrane"},{"category":"Component","description":" integral to membrane"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" transferase activity, transferring glycosyl groups"},{"category":"Function","description":" transferase activity, transferring hexosyl groups"},{"category":"Process","description":" Not Available"}],"pfams":[{"name":"DIE2_ALG10","identifier":"PF04922"}],"pathways":[{"name":"N-Glycan biosynthesis","kegg_map_id":"00510"}],"gene_sequence":"ATGGATGCAAAGAAAAATACTGGTGAAGCCAATAATGATGTATTGGAAGAGGAAGCAGCGATTCAGTTGATTGCACCAGGTATAGCGAGAAACTTAACACAAGAAGTCATTACCGGTATCTTCTGTAATGTAGTAATATATCCTCTTCTTCTAATATATTTTGTCTTAACTTTCCGTTACATGACTACAAATATTGTACCTTATGAATTTATAGATGAAAAGTTTCACGTTGGCCAAACTTTGACCTATTTAAAAGGTAAATGGACTCAATGGGACCCTAAAATAACAACCCCCCCTGGAATCTATATTTTGGGTTTAATTAATTATTATTGTATAAAGCCCATATTCAAGTCGTGGAGCACACTAACCATACTAAGATTAGTTAATTTACTTGGAGGGATTATCGTTTTCCCCATTTTAGTACTCAGGCCAATATTCCTTTTTAATGCCTTAGGTTTTTGGCCCGTTTCATTAATGAGCTTCCCATTGATGACAACTTATTATTACTTATTTTACACCGATGTGTGGTCTACAATTCTGATATTGCAATCACTCAGCTGCGTGTTAACATTACCGTTTGGCCCCGTGAAGAGTATATGGTTGAGTGCTTTTTTTGCTGGTGTAAGCTGTCTCTTCAGACAAACGAATATCATTTGGACGGGATTTATAATGATTCTTGCTGTTGAACGCCCAGCCATTTTACAAAAACAGTTCAACACGCATACGTTCAATAACTATTTGAAATTATTCATTCATGCTATTGACGATTTCTCCAACCTTGTTCTGCCCTATATGATAAATTTTGTTTTGTTCTTCATTTATCTGATTTGGAACAGATCCATAACACTAGGTGATAAGTCCAGCCACTCAGCAGGCCTGCATATAGTACAAATATTCTATTGTTTCACATTCATCACCGTTTTCAGTTTACCTATATGGATATCTCGTAATTTTATGAAGTTGTACAAATTAAGGATAAAACGGAAGCCAGTACAAACTTTTTTTGAATTTATTGGTATTATGCTAATCATAAGATACTTTACAAAAGTTCACCCATTTTTGTTAGCAGATAATAGACACTACACGTTCTACCTCTTCAGAAGATTGATAGGCAACAAAAGTAGACTAATCAAGTACTTTTTTATGACACCAATCTATCATTTCTCCACTTTCGCATACCTTGAAGTGATGAGACCCAACCAGCTCACCTTTCACCCCATCACTCCACTCCCCATCAAAGAACCTGTACATTTACCCATACAACTGACACATGTATCGTGGACGGCCTTAATAACGTGCACCATGGTAACTATCGTTCCATCACCCTTATTCGAACCTCGTTACTATATATTGCCCTATTTCTTTTGGAGAATATTTATTACCTGCAGCTGCGAACCTTTGATAAAGGATTTAAAACCTGCTAAAGAAGGCGAAAACCCAATTACCATAAGCAGTACGAAAAGACTGTTCATGGAATTTTTATGGTTCATGCTCTTCAATGTCGTTACTTTAGTTATCTTTTCCAAGGTCTCATTTCCTTGGACCACTGAGCCCTATTTGCAAAGAATAATATGGTGA","protein_sequence":"MDAKKNTGEANNDVLEEEAAIQLIAPGIARNLTQEVITGIFCNVVIYPLLLIYFVLTFRYMTTNIVPYEFIDEKFHVGQTLTYLKGKWTQWDPKITTPPGIYILGLINYYCIKPIFKSWSTLTILRLVNLLGGIIVFPILVLRPIFLFNALGFWPVSLMSFPLMTTYYYLFYTDVWSTILILQSLSCVLTLPFGPVKSIWLSAFFAGVSCLFRQTNIIWTGFIMILAVERPAILQKQFNTHTFNNYLKLFIHAIDDFSNLVLPYMKNFVLFFIYLIWNRSITLGDKSSHSAGLHIVQIFYCFTFITVFSLPIWISRNFMKLYKLRIKRKPVQTFFEFIGIMLIIRYFTKVHPFLLADNRHYTFYLFRRLIGNKSRLIKYFFMTPIYHFSTFAYLEVMRPNQLTFHPITPLPIKEPVHLPIQLTHVSWTALITCTMVTIVPSPLFEPRYYILPYFFWRIFITCSCEPLIKDLKPAKEGENPITISSTKRLFMEFLWFMLFNVVTLVIFSKVSFPWTTEPYLQRIIW"}]}