{"ymdb_id":"YMDB16257","created_at":"2016-09-12T18:29:40.000Z","updated_at":"2016-10-17T22:34:44.000Z","name":"γ-L-glutamyl 5-phosphate","cas":null,"state":null,"melting_point":null,"description":null,"experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":null,"synthesis_reference":null,"chebi_id":null,"hmdb_id":null,"kegg_id":null,"pubchem_id":null,"cs_id":null,"foodb_id":null,"wikipedia_link":null,"biocyc_id":null,"iupac":"(2S)-2-amino-5-(hydrogen phosphonatooxy)-5-oxopentanoate","traditional_iupac":"(2S)-2-amino-5-(hydrogen phosphonatooxy)-5-oxopentanoate","logp":"-3.0424739962552194","pka":"1.976858456614289","alogps_solubility":"3.82e+01 g/l","alogps_logp":"-1.46","alogps_logs":"-0.84","acceptor_count":"7","donor_count":"2","rotatable_bond_count":"6","polar_surface_area":"152.81","refractivity":"52.162800000000004","polarizability":"17.27512480832278","formal_charge":"-2","physiological_charge":"-2","pka_strongest_basic":"9.511214443237481","pka_strongest_acidic":"1.1185265364746844","bioavailability":"1","number_of_rings":"0","rule_of_five":"1","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"0","synonyms":[],"pathways":[{"name":"Proline Metabolism","kegg_map_id":null}],"growth_conditions":[],"references":[],"proteins":[{"created_at":"2011-05-26T20:31:54.000Z","updated_at":"2011-05-27T15:01:09.000Z","name":"Glutamate 5-kinase","uniprot_id":"P32264","uniprot_name":"PROB_YEAST","enzyme":true,"transporter":false,"gene_name":"PRO1","num_residues":428,"molecular_weight":"47161.69922","theoretical_pi":"6.75","general_function":"Involved in cellular amino acid biosynthetic process","specific_function":"Catalyzes the transfer of a phosphate group to glutamate to form glutamate 5-phosphate which rapidly cyclizes to 5- oxoproline","reactions":[{"id":1570,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2597,"direction":"\u003e","locations":"Cytoplasm","altext":"ATP + L-glutamate = ADP + L-glutamate 5-phosphate.","export":false,"pw_reaction_id":null,"source":null},{"id":3716,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006232","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm","genbank_gene_id":"M85293","genbank_protein_id":"172241","gene_card_id":"PRO1","chromosome_location":"chromosome 4","locus":"YDR300C","synonyms":["GK","Gamma-glutamyl kinase"],"enzyme_classes":["2.7.2.11"],"go_classes":[{"category":"Component","description":" cell part"},{"category":"Component","description":" intracellular part"},{"category":"Component","description":" cytoplasm"},{"category":"Function","description":" nucleic acid binding"},{"category":"Function","description":" RNA binding"},{"category":"Function","description":" phosphotransferase activity, carboxyl group as acceptor"},{"category":"Function","description":" glutamate 5-kinase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" transferase activity, transferring phosphorus-containing groups"},{"category":"Function","description":" binding"},{"category":"Process","description":" cellular amino acid biosynthetic process"},{"category":"Process","description":" proline metabolic process"},{"category":"Process","description":" proline biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"},{"category":"Process","description":" glutamine family amino acid metabolic process"}],"pfams":[{"name":"AA_kinase","identifier":"PF00696"},{"name":"PUA","identifier":"PF01472"}],"pathways":[{"name":"Arginine and proline metabolism","kegg_map_id":"00330"},{"name":"Proline Metabolism","kegg_map_id":null}],"gene_sequence":"ATGAAGGATGCTAATGAGAGTAAATCGTATACTATAGTGATCAAATTAGGCTCTTCATCGCTAGTAGATGAAAAAACCAAAGAACCTAAGTTAGCTATCATGTCGCTTATTGTCGAAACTGTAGTCAAATTGAGAAGAATGGGACACAAAGTTATCATCGTGTCCAGTGGTGGTATTGCTGTTGGTTTGAGGACTATGCGTATGAATAAAAGACCAAAACATTTAGCAGAAGTTCAGGCCATCGCAGCTATTGGGCAGGGTAGATTGATCGGGAGATGGGATCTTCTGTTTTCGCAATTTGATCAACGTATCGCTCAAATTCTATTGACCAGAAATGATATTCTGGACTGGACCCAATATAAGAACGCTCAAAACACAATTAATGAATTGTTGAACATGGGCGTTATTCCCATTGTGAATGAAAACGACACACTATCTGTTAGAGAAATCAAATTTGGTGACAATGACACTTTATCAGCAATTACTTCTGCTTTAATCCATGCAGATTATCTTTTCTTACTGACAGATGTTGACTGTTTGTATACTGATAATCCAAGGACAAACCCAGATGCCATGCCGATCTTAGTTGTCCCAGATCTCTCAAAGGGTTTGCCCGGTGTGAATACTGCTGGTGGTTCAGGTTCTGACGTTGGGACCGGTGGTATGGAAACTAAATTGGTTGCTGCAGATTTGGCAACGAATGCCGGTGTTCATACGTTGATCATGAAAAGCGATACACCTGCGAATATAGGTAGAATTGTCGAGTATATGCAAACTCTAGAACTTGACGATGAAAATAAAGTTAAACAAGCATATAATGGCGATTTAACGGATTTGCAAAAAAGAGAATTTGAGAAATTAAAGGCTCTTAACGTTCCACTACATACGAAGTTCATTGCTAATGATAATAAACACCATCTAAAGAATAGAGAGTTTTGGATTTTACACGGTCTTGTCTCTAAAGGCGCTGTTGTTATAGACCAAGGTGCGTACCGAGCCTTAACAAGGAAAAATAAGGCGGGATTATTGCCAGCAGGTGTTATTGATGTTCAGGGCACTTTCCATGAGTTAGAATGTGTTGACATAAAAGTTGGTAAAAAGTTACCAGATGGCACGTTAGATCCAGATTTTCCCTTGCAAACAGTAGGCAAGGCAAGATGCAATTACACGAGTTCTGAATTAACTAAAATTAAAGGTTTGCACAGTGACCAAATCGAAGAGGAATTGGGCTATAATGACAGCGAATATGTCGCTCATAGAGAAAATTTGGCATTCCCACCTCGTTGA","protein_sequence":"MKDANESKSYTIVIKLGSSSLVDEKTKEPKLAIMSLIVETVVKLRRMGHKVIIVSSGGIAVGLRTMRMNKRPKHLAEVQAIAAIGQGRLIGRWDLLFSQFDQRIAQILLTRNDILDWTQYKNAQNTINELLNMGVIPIVNENDTLSVREIKFGDNDTLSAITSALIHADYLFLLTDVDCLYTDNPRTNPDAMPILVVPDLSKGLPGVNTAGGSGSDVGTGGMETKLVAADLATNAGVHTLIMKSDTPANIGRIVEYMQTLELDDENKVKQAYNGDLTDLQKREFEKLKALNVPLHTKFIANDNKHHLKNREFWILHGLVSKGAVVIDQGAYAALTRKNKAGLLPAGVIDVQGTFHELECVDIKVGKKLPDGTLDPDFPLQTVGKARCNYTSSELTKIKGLHSDQIEEELGYNDSEYVAHRENLAFPPR"}]}