{"ymdb_id":"YMDB16175","created_at":"2016-09-12T18:19:52.000Z","updated_at":"2016-10-17T22:34:42.000Z","name":"Selenomethionine","cas":null,"state":"Solid","melting_point":null,"description":null,"experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":null,"synthesis_reference":null,"chebi_id":null,"hmdb_id":null,"kegg_id":null,"pubchem_id":null,"cs_id":null,"foodb_id":null,"wikipedia_link":null,"biocyc_id":null,"iupac":"2-amino-4-(methylselanyl)butanoic acid","traditional_iupac":"(+,-)-selenomethionine","logp":"-3.3019949587229283","pka":null,"alogps_solubility":"1.09e+02 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L-methionyl-tRNA(Met).","export":false,"pw_reaction_id":null,"source":null},{"id":14293,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006774","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm","genbank_gene_id":"V01316","genbank_protein_id":"3924","gene_card_id":"MES1","chromosome_location":"chromosome 7","locus":"YGR264C","synonyms":["Methionine--tRNA ligase","MetRS"],"enzyme_classes":["6.1.1.10"],"go_classes":[{"category":"Component","description":" cell part"},{"category":"Component","description":" intracellular part"},{"category":"Component","description":" cytoplasm"},{"category":"Function","description":" ligase activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" nucleoside binding"},{"category":"Function","description":" purine nucleoside binding"},{"category":"Function","description":" adenyl nucleotide binding"},{"category":"Function","description":" methionine-tRNA ligase activity"},{"category":"Function","description":" adenyl ribonucleotide binding"},{"category":"Function","description":" ATP binding"},{"category":"Function","description":" ligase activity, forming carbon-oxygen bonds"},{"category":"Function","description":" ligase activity, forming aminoacyl-tRNA and related compounds"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" aminoacyl-tRNA ligase activity"},{"category":"Function","description":" nucleotide binding"},{"category":"Process","description":" RNA metabolic process"},{"category":"Process","description":" ncRNA metabolic process"},{"category":"Process","description":" biosynthetic process"},{"category":"Process","description":" tRNA metabolic process"},{"category":"Process","description":" tRNA aminoacylation"},{"category":"Process","description":" tRNA aminoacylation for protein translation"},{"category":"Process","description":" macromolecule biosynthetic process"},{"category":"Process","description":" cellular macromolecule biosynthetic process"},{"category":"Process","description":" translation"},{"category":"Process","description":" methionyl-tRNA aminoacylation"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" macromolecule metabolic process"},{"category":"Process","description":" cellular macromolecule metabolic process"}],"pfams":[{"name":"tRNA-synt_1g","identifier":"PF09334"},{"name":"MetRS-N","identifier":"PF09635"}],"pathways":[{"name":"Selenocompound metabolism","kegg_map_id":"00450"}],"gene_sequence":"ATGTCTTTCCTCATTTCCTTTGATAAATCAAAGAAACATCCTGCCCATTTGCAGTTAGCGAACAATTTGAAGATTGCCCTAGCACTTGAATATGCAAGCAAAAATTTAAAGCCCGAAGTTGACAATGATAATGCTGCCATGGAATTGCGCAATACAAAGGAACCTTTCCTTTTGTTTGATGCTAACGCTATTCTAAGATATGTCATGGATGATTTTGAAGGTCAAACTTCCGACAAGTATCAATTTGCATTGGCATCTTTACAAAACCTGTTATATCATAAAGAATTACCTCAACAGCATGTCGAGGTTTTGACAAATAAGGCCATTGAAAATTACTTGGTCGAATTAAAAGAACCATTGACTGCTACAGATTTGATCCTGTTTGCTAACGTTTATGCTCTAAATTCTTCTTTAGTTCATTCTAAATTCCCAGAATTGCCATCCAAAGTGCATAACGCTGTAGCATTGGCTAAAAAGCATGTTCCACGTGATTCTTCTTCTTTCAAAAACATCGGCGCAGTGAAAATCCAAGCTGACTTAACAGTTAAGCCAAAGGATTCAGAAATTTTGCCTAAGCCAAACGAAAGAAACATCTTGATCACTTCGGCATTACCTTATGTCAACAACGTTCCACACTTGGGTAATATCATCGGTAGTGTTCTTTCAGCAGACATTTTTGCTCGTTACTGTAAGGGACGTAATTATAATGCCTTGTTTATTTGTGGTACTGATGAATATGGTACTGCCACGGAAACTAAAGCTTTGGAGGAAGGTGTGACACCAAGACAACTATGTGACAAATATCACAAAATCCACAGTGACGTTTACAAGTGGTTCCAAATTGGATTTGATTATTTCGGTAGAACTACGACGGATAAGCAAACGGAGATTGCTCAACATATTTTTACAAAGCTAAATTCGAATGGTTATCTAGAAGAACAATCTATGAAGCAATTGTACTGTCCAGTTCATAATTCTTATCTGGCTGATCGTTACGTGGAAGGTGAATGTCCAAAATGTCACTACGATGATGCTCGTGGGGATCAATGTGACAAATGTGGTGCCCTGTTAGATCCATTTGAATTGATCAATCCACGTTGTAAATTAGATGATGCTTCTCCAGAACCAAAATATTCTGATCATATTTTCCTATCGCTGGATAAATTAGAAAGCCAAATTTCTGAATGGGTTGAAAAGGCCTCTGAAGAAGGTAACTGGTCAAAAAATTCAAAAACAATTACGCAATCATGGTTGAAGGATGGTTTGAAGCCACGTTGTATTACAAGAGATTTAGTTTGGGGTACGCCAGTGCCTTTAGAAAAATATAAAGACAAAGTCTTGTACGTTTGGTTTGACGCTACAATCGGCTACGTTTCCATCACTTCCAATTACACCAAAGAATGGAAACAATGGTGGAATAATCCAGAGCATGTTTCATTGTATCAATTCATGGGTAAGGACAATGTTCCTTTCCATACAGTTGTTTTCCCTGGTTCTCAATTGGGTACGGAAGAGAACTGGACTATGTTGCACCATTTGAATACTACAGAATACTTACAATATGAGAACGGTAAATTTTCTAAAAGTAGGGGTGTTGGTGTTTTTGGTAATAACGCTCAAGACTCTGGAATTTCTCCAAGTGTTTGGAGATACTACCTGGCATCTGTTAGACCAGAATCTAGTGATTCTCATTTCTCATGGGATGACTTTGTTGCTAGAAACAACAGTGAATTGTTGGCTAACTTGGGTAACTTTGTTAACAGATTAATTAAGTTTGTTAATGCCAAATATAATGGTGTTGTTCCAAAATTCGACCCCAAGAAGGTTTCCAATTATGATGGTTTAGTTAAAGATATCAACGAAATTTTATCAAATTACGTCAAGGAAATGGAACTTGGACATGAAAGACGTGGTCTAGAAATTGCCATGTCGTTAAGTGCTCGTGGTAACCAGTTTTTGCAAGAAAATAAGTTGGACAATACCTTGTTTTCACAGTCCCCAGAAAAGTCAGATGCTGTTGTCGCAGTTGGTTTGAATATTATTTACGCTGTTAGCTCTATTATCACACCATATATGCCAGAAATAGGTGAGAAAATAAACAAGATGTTAAATGCACCAGCTTTAAAAATTGATGATAGATTCCATTTGGCAATCCTAGAAGGACATAATATAAACAAGGCAGAATACTTGTTCCAACGTATTGATGAAAAGAAAATCGATGAATGGAGAGCCAAATATGGTGGTCAACAAGTGTAA","protein_sequence":"MSFLISFDKSKKHPAHLQLANNLKIALALEYASKNLKPEVDNDNAAMELRNTKEPFLLFDANAILRYVMDDFEGQTSDKYQFALASLQNLLYHKELPQQHVEVLTNKAIENYLVELKEPLTTTDLILFANVYALNSSLVHSKFPELPSKVHNAVALAKKHVPRDSSSFKNIGAVKIQADLTVKPKDSEILPKPNERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTATETKALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNGYLEEQSMKQLYCPVHNSYLADRYVEGECPKCHYDDARGDQCDKCGALLDPFELINPRCKLDDASPEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCITRDLVWGTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKEWKQWWNNPEHVSLYQFMGKDNVPFHTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPSVWRYYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFVNAKYNGVVPKFDPKKVSNYDGLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTLFSQSPEKSDAVVAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALKIDDRFHLAILEGHNINKAEYLFQRIDEKKIDEWRAKYGGQQV"}]}