{"ymdb_id":"YMDB16160","created_at":"2016-09-12T18:18:05.000Z","updated_at":"2016-10-17T22:34:42.000Z","name":"Alpha-D-Glucose 1,6-bisphosphate","cas":null,"state":"Solid","melting_point":null,"description":null,"experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":null,"synthesis_reference":null,"chebi_id":null,"hmdb_id":null,"kegg_id":null,"pubchem_id":null,"cs_id":null,"foodb_id":null,"wikipedia_link":null,"biocyc_id":null,"iupac":"{[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[(phosphonooxy)methyl]oxan-2-yl]oxy}phosphonic acid","traditional_iupac":"[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[(phosphonooxy)methyl]oxan-2-yl]oxyphosphonic acid","logp":"-3.1796712806666663","pka":"1.4915079093370291","alogps_solubility":"1.60e+01 g/l","alogps_logp":"-1.65","alogps_logs":"-1.33","acceptor_count":"10","donor_count":"7","rotatable_bond_count":"5","polar_surface_area":"203.43999999999997","refractivity":"57.669200000000004","polarizability":"24.959614359562895","formal_charge":"0","physiological_charge":"-4","pka_strongest_basic":"-3.649397555635149","pka_strongest_acidic":"0.8867658416836726","bioavailability":"0","number_of_rings":"1","rule_of_five":"0","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"0","synonyms":[],"pathways":[{"name":"Starch and sucrose metabolism","kegg_map_id":"00500"}],"growth_conditions":[],"references":[],"proteins":[{"created_at":"2011-05-27T05:31:20.000Z","updated_at":"2011-05-27T05:31:20.000Z","name":"Phosphoglucomutase YMR278W","uniprot_id":"Q03262","uniprot_name":"PGM3_YEAST","enzyme":true,"transporter":false,"gene_name":null,"num_residues":622,"molecular_weight":"71068.60156","theoretical_pi":"6.21","general_function":"Involved in intramolecular transferase activity, phosphotransferases","specific_function":"This enzyme participates in both the breakdown and synthesis of glucose","reactions":[{"id":2451,"direction":"\u003e","locations":"Cytoplasm. Nucleus;Cytoplasm","altext":"Alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate.","export":false,"pw_reaction_id":null,"source":null},{"id":14350,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006864","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm. Nucleus","genbank_gene_id":"Z49704","genbank_protein_id":"825544","gene_card_id":null,"chromosome_location":null,"locus":"YMR278W","synonyms":["PGM","Glucose phosphomutase"],"enzyme_classes":["5.4.2.2"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" ion binding"},{"category":"Function","description":" cation binding"},{"category":"Function","description":" metal ion binding"},{"category":"Function","description":" magnesium ion binding"},{"category":"Function","description":" isomerase activity"},{"category":"Function","description":" intramolecular transferase activity"},{"category":"Function","description":" intramolecular transferase activity, phosphotransferases"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Process","description":" primary metabolic process"},{"category":"Process","description":" carbohydrate metabolic process"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"PGM_PMM_I","identifier":"PF02878"},{"name":"PGM_PMM_II","identifier":"PF02879"},{"name":"PGM_PMM_IV","identifier":"PF00408"},{"name":"PGM_PMM_III","identifier":"PF02880"}],"pathways":[{"name":"Glycolysis / Gluconeogenesis","kegg_map_id":"00010"},{"name":"Pentose phosphate pathway","kegg_map_id":"00030"},{"name":"Galactose metabolism","kegg_map_id":"00052"},{"name":"Purine metabolism","kegg_map_id":"00230"},{"name":"Starch and sucrose metabolism","kegg_map_id":"00500"},{"name":"Amino sugar and nucleotide sugar metabolism","kegg_map_id":"00520"}],"gene_sequence":"ATGTTGCAAGGAATTTTAGAAACCGTACCATCTGACTTGAAAGATCCGATATCATTATGGTTTAAGCAAGACCGCAACCCAAAAACTATAGAAGAGGTCACCGCTCTCTGCAAAAAATCCGACTGGAATGAGTTACACAAAAGATTTGATTCTAGAATTCAGTTTGGCACTGCTGGTTTAAGATCGCAAATGCAAGCTGGCTTTAGCAGGATGAATACTTTAGTAGTCATACAAGCGTCTCAGGGATTGGCAACTTATGTAAGACAACAGTTTCCAGACAATTTGGTAGCTGTTGTGGGACACGATCATAGATTCCATTCTAAGGAGTTCGCTAGAGCTACTGCTGCTGCATTTCTTTTAAAAGGATTTAAGGTACATTATTTGAATCCTGACCACGAATTTGTTCATACCCCTTTAGTTCCCTTTGCAGTGGATAAGCTAAAGGCCTCCGTTGGCGTAATGATAACAGCAAGTCACAACCCAAAAATGGATAATGGATATAAAGTATACTATTCCAATGGATGCCAAATCATTCCACCTCACGATCATGCCATCTCTGATTCCATTGACGCAAATTTAGAACCATGGGCCAATGTGTGGGATTTCGACGATGTTCTAAATAAGGCTCTCAAACAAGGGAAATTGATGTATTCCAGAGAAGAAATGCTGAAGTTATATTTAGAGGAGGTTTCTAAAAATCTGGTAGAAATCAACCCATTAAAGCTTGAAGTAAAAGCCAAACCTTGGTTCGTTTACACTCCAATGCATGGGGTTGGATTTGACATTTTCAGCACCATCGTAAAAAAAACACTGTGCCTGGTAGAAGGTAAGGATTACCTATGTGTTCCTGAACAACAAAATCCAGATCCTTCTTTCCCAACTGTTGGATTTCCTAACCCTGAAGAAAAAGGTGCTTTAGACATTGGTATAAACTTGGCTGAAAAACATGACATTGACTTACTTGTTGCCAACGACCCTGACGCTGATAGATTCTCTGTTGCTGTTAAAGATATGCAGTCAGGCGAATGGCGACAACTAACAGGTAACGAAATCGGTTTTCTTTTTGCATTTTATGAATATCAGAAATATAAAAGTATGGACAAAGAATTTCAGCACGTTCATCCGTTGGCTATGTTAAATTCAACAGTGTCTTCACAAATGATAAAAAAAATGGCAGAAATAGAAGGGTTCCATTATGAGGATACATTAACAGGATTTAAGTGGATCGGAAATCGTGCCATACTCTTGGAAAAGAAAGGCTATTACGTTCCTTTTGGATTCGAGGAAGCAATAGGCTACATGTTTCCAGCAATGGAGCATGATAAGGATGGTATCAGTGCATCCATTGTCTTCTTGCAAGCCTACTGTAAGTGGAAAATAGACCACAATTTGGACCCGCTAAATGTCTTAGAAAATGGCTTCAAAAAATATGGCGTGTTCAAAGAGTACAATGGCTATTATGTCGTTCCAAATCCAACTGTTACAAAAGATATATTTGACTACATCAGGAATGTCTACACTCCTGAGGGCGCGTCATATCCTTCATCTATTGGTGAAGAAATCGAAGTACTTTACTATCGAGATTTAACCACTGGTTACCAATCGGATACCATAAATCATAAACCTACTCTACCCGTCGATCCTACATCACAAATGATAACAGTATCTGCTAGACCAAGTAACGGTAGTGAGAATGAGCATATCCGCTTCACTATTCGCGGGTCCGGAACAGAACCAAAACTTAAAGTATATATTGAAGCTTGCGCAAATGAAGAACAAAGAGCCTCTTTCTTGGCGAAATTGACTTGGAATGTGCTGAGACGTGAATGGTTTAGACCAGATGAAATGAATATAGTTACAAAATTTTGA","protein_sequence":"MLQGILETVPSDLKDPISLWFKQDRNPKTIEEVTALCKKSDWNELHKRFDSRIQFGTAGLRSQMQAGFSRMNTLVVIQASQGLATYVRQQFPDNLVAVVGHDHRFHSKEFARATAAAFLLKGFKVHYLNPDHEFVHTPLVPFAVDKLKASVGVMITASHNPKMDNGYKVYYSNGCQIIPPHDHAISDSIDANLEPWANVWDFDDVLNKALKQGKLMYSREEMLKLYLEEVSKNLVEINPLKLEVKAKPWFVYTPMHGVGFDIFSTIVKKTLCLVEGKDYLCVPEQQNPDPSFPTVGFPNPEEKGALDIGINLAEKHDIDLLVANDPDADRFSVAVKDMQSGEWRQLTGNEIGFLFAFYEYQKYKSMDKEFQHVHPLAMLNSTVSSQMIKKMAEIEGFHYEDTLTGFKWIGNRAILLEKKGYYVPFGFEEAIGYMFPAMEHDKDGISASIVFLQAYCKWKIDHNLDPLNVLENGFKKYGVFKEYNGYYVVPNPTVTKDIFDYIRNVYTPEGASYPSSIGEEIEVLYYRDLTTGYQSDTINHKPTLPVDPTSQMITVSARPSNGSENEHIRFTIRGSGTEPKLKVYIEACANEEQRASFLAKLTWNVLRREWFRPDEMNIVTKF"}]}