{"ymdb_id":"YMDB01562","created_at":"2011-08-11T21:19:54.000Z","updated_at":"2016-10-18T17:12:05.000Z","name":"5-Hydroxylysine","cas":"1190-94-9","state":"Solid","melting_point":null,"description":"5-Hydroxylysine is an amino acid with the molecular formula C6H14N2O3. It was first discovered in 1921 by Donald Van Slyke. It is a hydroxy derivative of lysine. It is most widely known as a component of collagen.","experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":null,"synthesis_reference":null,"chebi_id":"18040","hmdb_id":"HMDB00450","kegg_id":"C01211","pubchem_id":"3032849","cs_id":"24730605","foodb_id":null,"wikipedia_link":null,"biocyc_id":"CPD-7689","iupac":"(2S,5R)-2,6-diamino-5-hydroxyhexanoic acid","traditional_iupac":"L-hydroxylysine","logp":"-4.414212989148228","pka":"14.903490442523363","alogps_solubility":"1.24e+02 g/l","alogps_logp":"-3.77","alogps_logs":"-0.12","acceptor_count":"5","donor_count":"4","rotatable_bond_count":"5","polar_surface_area":"109.57","refractivity":"39.17100000000001","polarizability":"16.54664931761117","formal_charge":"0","physiological_charge":"1","pka_strongest_basic":"9.746257700424144","pka_strongest_acidic":"2.4473857532646233","bioavailability":"1","number_of_rings":"0","rule_of_five":"1","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"0","synonyms":["(2S,5R)-2,6-diamino-5-Hydroxyhexanoate","(2S,5R)-2,6-diamino-5-Hydroxyhexanoic acid","(2S,5R)-5-Hydroxylysine","(5R)-5-Hydroxy-L-lysine","2,6-diamino-5-Hydroxyhexanoic acid","5-Hydroxy-L-lysine","5-Hydroxy-lysine","a,epsilon-diamino-delta-Hydroxycaproate","a,epsilon-diamino-delta-Hydroxycaproic acid","a,epsilon-diamino-δ-hydroxycaproate","a,epsilon-diamino-δ-hydroxycaproic acid","alpha,epsilon-diamino-delta-Hydroxycaproate","alpha,epsilon-diamino-delta-Hydroxycaproic acid","D-Hydroxy-L-lysine","D-Hydroxylysine","delta-DL-Hydroxylysine","delta-Hydroxy-L-lysine","delta-Hydroxylysine","erythro-5-Hydroxy-L-lysine","Hydroxy-lysine","Hydroxylysine","L-D-Hydroxylysine","L-delta-Hydroxylysine","L-erythro-5-Hydroxylysine","L-Normal-5-hydroxylysine","Procollagen 5-hydroxy-L-lysine","Procollagen L-erythro-5-hydroxy-L-lysine","α,epsilon-diamino-δ-hydroxycaproate","α,epsilon-diamino-δ-hydroxycaproic acid"],"pathways":[],"growth_conditions":[{"growth_media":"YEB media with 0.5 mM glucose","concentration":"6315.0","concentration_units":"\u0026#181;M","error":"316.0"}],"references":[],"proteins":[]}