{"ymdb_id":"YMDB00908","created_at":"2011-05-29T19:03:48.000Z","updated_at":"2016-09-08T18:36:03.000Z","name":"Hydroxide","cas":"14280-30-9","state":"Solid","melting_point":"","description":"Hydroxide is the most common name for the diatomic anion OH, consisting of oxygen and hydrogen atoms, usually derived from the dissociation of a base.","experimental_water_solubility":"","experimental_logp_hydrophobicity":"","location":"mitochondrion;cytoplasm","synthesis_reference":"Revzin, G. E.; Lavrent'eva, V. G.; Revzina, T. V.; Kashina, N. I.  Preparation of hydroxides slightly soluble in water.    U.S.S.R.  (1967),     CODEN: URXXAF  SU  196735  19670531  CAN 68:4526  AN 1968:4526","chebi_id":"16234","hmdb_id":"HMDB01039","kegg_id":"C01328","pubchem_id":"961","cs_id":"936","foodb_id":null,"wikipedia_link":"Hydroxide","biocyc_id":"NH4OH","iupac":"hydroxide","traditional_iupac":"hydroxide","logp":"-0.6519999999999999","pka":null,"alogps_solubility":null,"alogps_logp":null,"alogps_logs":null,"acceptor_count":"1","donor_count":"1","rotatable_bond_count":"0","polar_surface_area":"0","refractivity":"13.914900000000001","polarizability":"1.1909242651253518","formal_charge":"-1","physiological_charge":"0","pka_strongest_basic":"-1.7999999999999998","pka_strongest_acidic":"15.7","bioavailability":"1","number_of_rings":"0","rule_of_five":"1","ghose_filter":"0","veber_rule":"1","mddr_like_rule":"0","synonyms":["hydridooxygenate(1-)","Hydrogen oxide","Hydroxide anion","Hydroxide ion","Hydroxide ion(1-)","Hydroxide(1-)","Hydroxy","Hydroxy anion","Hydroxy ion","Hydroxyl","Hydroxyl anion","Hydroxyl ion","Hydroxyl ion (OH1-)","Hydroxyl radical","Hydroxyl radicals","OH","Oxidanide","Oxygen ion (O1-)","water ion(1-)"],"pathways":[],"growth_conditions":[],"references":[{"pubmed_id":18846089,"citation":"Herrgard, M. J., Swainston, N., Dobson, P., Dunn, W. B., Arga, K. Y., Arvas, M., Bluthgen, N., Borger, S., Costenoble, R., Heinemann, M., Hucka, M., Le Novere, N., Li, P., Liebermeister, W., Mo, M. L., Oliveira, A. P., Petranovic, D., Pettifer, S., Simeonidis, E., Smallbone, K., Spasic, I., Weichart, D., Brent, R., Broomhead, D. S., Westerhoff, H. V., Kirdar, B., Penttila, M., Klipp, E., Palsson, B. O., Sauer, U., Oliver, S. G., Mendes, P., Nielsen, J., Kell, D. B. (2008). \"A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.\" Nat Biotechnol 26:1155-1160."}],"proteins":[{"created_at":"2011-05-27T11:38:47.000Z","updated_at":"2011-05-27T15:01:33.000Z","name":"Mitochondrial phosphate carrier protein 2","uniprot_id":"P40035","uniprot_name":"PIC2_YEAST","enzyme":false,"transporter":true,"gene_name":"PIC2","num_residues":300,"molecular_weight":"33528.10156","theoretical_pi":"9.8","general_function":"Involved in binding","specific_function":"Transport of phosphate groups from the cytosol to the mitochondrial matrix","reactions":[],"signal_regions":"None","transmembrane_regions":"22-42;70-89;108-128;171-192;211-231;260-280","pdb_id":null,"cellular_location":"Mitochondrion inner membrane; Multi-pass membrane protein","genbank_gene_id":"U18796","genbank_protein_id":"603286","gene_card_id":"PIC2","chromosome_location":"chromosome 5","locus":"YER053C","synonyms":["Phosphate transport protein 2","PTP 2","Pi carrier isoform 2","mPic 2"],"enzyme_classes":[],"go_classes":[{"category":"Component","description":" cell part"},{"category":"Component","description":" membrane"},{"category":"Function","description":" binding"},{"category":"Process","description":" transmembrane transport"},{"category":"Process","description":" establishment of localization"},{"category":"Process","description":" transport"}],"pfams":[{"name":"Mito_carr","identifier":"PF00153"}],"pathways":[],"gene_sequence":"ATGGAGTCCAATAAACAACCACGTAAAATCCAATTATATACGAAAGAGTTTTATGCCACATGTACCTTAGGTGGTATAATTGCGTGCGGTCCAACACATTCTTCGATCACTCCACTAGATCTTGTCAAATGTAGGCTACAGGTCAATCCCAAGTTGTATACTTCAAACTTACAAGGGTTCCGTAAGATTATAGCTAATGAAGGCTGGAAGAAAGTATACACTGGGTTTGGTGCTACATTCGTCGGATATTCGCTACAAGGTGCAGGTAAGTATGGTGGTTATGAGTATTTCAAGCATTTGTATTCTAGTTGGTTAAGTCCTGGTGTCACTGTGTACTTGATGGCCTCAGCGACCGCTGAATTCCTCGCTGATATCATGTTGTGCCCATTTGAAGCTATTAAAGTGAAACAGCAGACTACTATGCCGCCCTTTTGCAATAACGTTGTTGATGGATGGAAAAAAATGTATGCAGAAAGTGGAGGTATGAAAGCATTTTATAAAGGTATTGTTCCCCTATGGTGCAGACAGATTCCTTACACAATGTGTAAGTTTACCTCATTCGAAAAAATTGTTCAAAAAATATACAGTGTTTTACCTAAAAAGAAAGAAGAAATGAACGCATTACAGCAAATATCAGTCAGTTTTGTAGGTGGTTATCTGGCAGGTATATTATGTGCTGCAGTCTCACATCCTGCAGACGTTATGGTTTCCAAGATCAATAGCGAAAGAAAGGCCAACGAGTCCATGTCTGTAGCCTCTAAAAGAATATATCAAAAAATTGGCTTTACTGGGTTGTGGAATGGGTTAATGGTGAGAATTGTCATGATCGGTACTTTGACAAGTTTCCAATGGCTAATTTACGATTCGTTCAAGGCTTATGTAGGCTTACCAACCACCGGTTAG","protein_sequence":"MESNKQPRKIQLYTKEFYATCTLGGIIACGPTHSSITPLDLVKCRLQVNPKLYTSNLQGFRKIIANEGWKKVYTGFGATFVGYSLQGAGKYGGYEYFKHLYSSWLSPGVTVYLMASATAEFLADIMLCPFEAIKVKQQTTMPPFCNNVVDGWKKMYAESGGMKAFYKGIVPLWCRQIPYTMCKFTSFEKIVQKIYSVLPKKKEEMNALQQISVSFVGGYLAGILCAAVSHPADVMVSKINSERKANESMSVASKRIYQKIGFTGLWNGLMVRIVMIGTLTSFQWLIYDSFKAYVGLPTTG"}]}