{"ymdb_id":"YMDB00867","created_at":"2011-05-29T18:59:36.000Z","updated_at":"2016-09-08T18:36:00.000Z","name":"CDP-ribitol","cas":"3506-17-0","state":null,"melting_point":null,"description":"CDP-Ribitol is known to be an activated precursor for the synthesis of virulence-associated polysaccharides in the capsule of the Gram-negative pathogen Haemophilus influenzae and in the cell walls of Gram-positive pathogens including Staphylococcus aureus.","experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":null,"synthesis_reference":null,"chebi_id":"16022","hmdb_id":null,"kegg_id":"C00789","pubchem_id":"46878411","cs_id":null,"foodb_id":null,"wikipedia_link":null,"biocyc_id":null,"iupac":"{[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}({[hydroxy({[(2R,3S,4S)-2,3,4,5-tetrahydroxypentyl]oxy})phosphoryl]oxy})phosphinic acid","traditional_iupac":"cdp ribitol","logp":"-5.546027910000001","pka":"3.2716914228409646","alogps_solubility":"1.59e+01 g/l","alogps_logp":"-1.66","alogps_logs":"-1.53","acceptor_count":"14","donor_count":"9","rotatable_bond_count":"12","polar_surface_area":"291.59","refractivity":"104.95270000000001","polarizability":"44.37122842902403","formal_charge":"0","physiological_charge":"-2","pka_strongest_basic":"-0.03201053426432565","pka_strongest_acidic":"1.863228048328863","bioavailability":"0","number_of_rings":"2","rule_of_five":"0","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"0","synonyms":["CDP 5-ester with D-ribitol","Cdp ribitol","CDP-L-ribitol","CDPribitol","Cytidine 5'-(trihydrogen diphosphate), P'-5-ester with D-ribitol","Cytidine diphosphate ribitol"],"pathways":[{"name":"Pentose and glucuronate interconversions","kegg_map_id":"00040"}],"growth_conditions":[],"references":[{"pubmed_id":21062828,"citation":"Scheer, M., Grote, A., Chang, A., Schomburg, I., Munaretto, C., Rother, M., Sohngen, C., Stelzer, M., Thiele, J., Schomburg, D. (2011). \"BRENDA, the enzyme information system in 2011.\" Nucleic Acids Res 39:D670-D676."},{"pubmed_id":13911452,"citation":"SHAW, D. R. (1962). \"Pyrophosphorolysis and enzymic synthesis of cytidine diphosphate glycerol and cytidine diphosphate ribitol.\" Biochem J 82:297-312."}],"proteins":[]}