{"ymdb_id":"YMDB00756","created_at":"2011-05-29T18:50:18.000Z","updated_at":"2016-10-18T17:11:35.000Z","name":"3-phospho-D-glyceric acid","cas":"820-11-1","state":"Solid","melting_point":null,"description":"3-Phosphoglyceric acid (3PG) is a biochemically significant 3-carbon molecule that is a metabolic intermediate in both glycolysis and the Calvin cycle.","experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":"cytoplasm","synthesis_reference":null,"chebi_id":"17794","hmdb_id":"HMDB00807","kegg_id":"C00197","pubchem_id":"25245548","cs_id":"388326","foodb_id":null,"wikipedia_link":"3-Phosphoglyceric_acid","biocyc_id":"G3P","iupac":"(2R)-2-hydroxy-3-(phosphonooxy)propanoic acid","traditional_iupac":"D-glycerate 3-phosphate","logp":"-1.642305516","pka":"3.4930984077105847","alogps_solubility":"2.10e+01 g/l","alogps_logp":"-2.26","alogps_logs":"-0.95","acceptor_count":"6","donor_count":"4","rotatable_bond_count":"4","polar_surface_area":"124.29","refractivity":"31.256400000000003","polarizability":"13.540840192774787","formal_charge":"0","physiological_charge":"-3","pka_strongest_basic":"-4.151933713507117","pka_strongest_acidic":"1.3022122249394057","bioavailability":"1","number_of_rings":"0","rule_of_five":"1","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"0","synonyms":["3-(dihydrogen phosphate)Glycerate","3-(dihydrogen phosphate)Glyceric acid","3-Glycerophosphorate","3-Glycerophosphoric acid","3-P-D-glycerate","3-P-glycerate","3-PGA","3-phospho-(R)-glycerate","3-phospho-D-glycerate","3-phospho-glycerate","3-phospho-glyceric acid","3-phosphoglycerate","3-phosphoglyceric acid","D-(-)-3-Phosphoglyceric acid","d-glycerate 3-phosphate","D-glycerate-3-P","Glycerate 3-phosphate","glycerate-3-P","Glyceric acid 3-phosphate","Phosphoglycerate"],"pathways":[{"name":"Glycolysis / Gluconeogenesis","kegg_map_id":"00010"},{"name":"Glyoxylate and dicarboxylate metabolism","kegg_map_id":"00630"},{"name":"Glycerolipid metabolism","kegg_map_id":"00561"},{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"},{"name":"Methane metabolism","kegg_map_id":"00680"},{"name":"Glycolysis I","kegg_map_id":null},{"name":"glycine metabolism","kegg_map_id":null},{"name":"serine metabolism","kegg_map_id":null},{"name":"Glycerol metabolism","kegg_map_id":null},{"name":"Ethanol fermentation","kegg_map_id":null},{"name":"Starch and sucrose metabolism","kegg_map_id":"00500"}],"growth_conditions":[{"growth_media":"Synthetic medium with 2% glucose","concentration":"120.0","concentration_units":"\u0026#181;M","error":"10.0"},{"growth_media":"Synthetic medium with 2% galactose","concentration":"630.0","concentration_units":"\u0026#181;M","error":"100.0"}],"references":[{"pubmed_id":21062828,"citation":"Scheer, M., Grote, A., Chang, A., Schomburg, I., Munaretto, C., Rother, M., Sohngen, C., Stelzer, M., Thiele, J., Schomburg, D. (2011). \"BRENDA, the enzyme information system in 2011.\" Nucleic Acids Res 39:D670-D676."},{"pubmed_id":18846089,"citation":"Herrgard, M. J., Swainston, N., Dobson, P., Dunn, W. B., Arga, K. Y., Arvas, M., Bluthgen, N., Borger, S., Costenoble, R., Heinemann, M., Hucka, M., Le Novere, N., Li, P., Liebermeister, W., Mo, M. L., Oliveira, A. P., Petranovic, D., Pettifer, S., Simeonidis, E., Smallbone, K., Spasic, I., Weichart, D., Brent, R., Broomhead, D. S., Westerhoff, H. V., Kirdar, B., Penttila, M., Klipp, E., Palsson, B. O., Sauer, U., Oliver, S. G., Mendes, P., Nielsen, J., Kell, D. B. (2008). \"A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.\" Nat Biotechnol 26:1155-1160."},{"pubmed_id":4598292,"citation":"Faller, L. D., Johnson, A. M. (1974). \"Calorimetric studies of the role of magnesium ions in yeast enolase catalysis.\" Proc Natl Acad Sci U S A 71:1083-1087."},{"pubmed_id":1326413,"citation":"Melcher, K., Entian, K. D. (1992). \"Genetic analysis of serine biosynthesis and glucose repression in yeast.\" Curr Genet 21:295-300."},{"pubmed_id":12525494,"citation":"Albers, E., Laize, V., Blomberg, A., Hohmann, S., Gustafsson, L. (2003). \"Ser3p (Yer081wp) and Ser33p (Yil074cp) are phosphoglycerate dehydrogenases in Saccharomyces cerevisiae.\" J Biol Chem 278:10264-10272."},{"pubmed_id":3033435,"citation":"Rodicio, R., Heinisch, J. (1987). \"Isolation of the yeast phosphoglyceromutase gene and construction of deletion mutants.\" Mol Gen Genet 206:133-140."},{"pubmed_id":6229402,"citation":"Lagunas, R., Gancedo, C. (1983). \"Role of phosphate in the regulation of the Pasteur effect in Saccharomyces cerevisiae.\" Eur J Biochem 137:479-483."}],"proteins":[{"created_at":"2011-05-26T16:51:54.000Z","updated_at":"2011-05-27T15:01:01.000Z","name":"D-3-phosphoglycerate dehydrogenase 2","uniprot_id":"P40510","uniprot_name":"SER33_YEAST","enzyme":true,"transporter":false,"gene_name":"SER33","num_residues":469,"molecular_weight":"51187.80078","theoretical_pi":"6.38","general_function":"Involved in oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","specific_function":"3-phospho-D-glycerate + NAD(+) = 3- phosphonooxypyruvate + NADH","reactions":[{"id":1866,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2448,"direction":"\u003e","locations":"","altext":"3-phospho-D-glycerate + NAD(+) = 3-phosphonooxypyruvate + NADH.","export":false,"pw_reaction_id":null,"source":null},{"id":2449,"direction":"\u003e","locations":"","altext":"2-hydroxyglutarate + NAD(+) = 2-oxoglutarate + NADH.","export":false,"pw_reaction_id":null,"source":null},{"id":3841,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006364","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":"Z37997","genbank_protein_id":"556873","gene_card_id":"SER33","chromosome_location":"chromosome 9","locus":"YIL074C","synonyms":["3-PGDH 2"],"enzyme_classes":["1.1.1.95"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" cofactor binding"},{"category":"Function","description":" oxidoreductase activity, acting on CH-OH group of donors"},{"category":"Function","description":" oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor"},{"category":"Function","description":" NAD or NADH binding"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" nucleotide binding"},{"category":"Function","description":" oxidoreductase activity"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"2-Hacid_dh","identifier":"PF00389"},{"name":"2-Hacid_dh_C","identifier":"PF02826"}],"pathways":[{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"},{"name":"Methane metabolism","kegg_map_id":"00680"},{"name":"glycine metabolism","kegg_map_id":null},{"name":"serine metabolism","kegg_map_id":null}],"gene_sequence":"ATGTCTTATTCAGCTGCCGATAATTTACAAGATTCATTCCAACGTGCCATGAACTTTTCTGGCTCTCCTGGTGCAGTCTCAACCTCACCAACTCAGTCATTTATGAACACACTACCTCGTCGTGTAAGCATTACAAAGCAACCAAAGGCTTTAAAACCTTTTTCTACTGGTGACATGAATATTCTACTGTTGGAAAATGTCAATGCAACTGCAATCAAAATCTTCAAGGATCAGGGTTACCAAGTAGAGTTCCACAAGTCTTCTCTACCTGAGGATGAATTGATTGAAAAAATCAAAGACGTACACGCTATCGGTATAAGATCCAAAACTAGATTGACTGAAAAAATACTACAGCATGCCAGGAATCTAGTTTGTATTGGTTGTTTTTGCATAGGTACCAATCAAGTAGACCTAAAATATGCCGCTAGTAAAGGTATTGCTGTTTTCAATTCGCCATTCTCCAATTCAAGATCCGTAGCAGAATTGGTAATTGGTGAGATCATTAGTTTAGCAAGACAATTAGGTGATAGATCCATTGAACTGCATACAGGTACATGGAATAAAGTCGCTGCTAGGTGTTGGGAAGTAAGAGGAAAAACTCTCGGTATTATTGGGTATGGTCACATTGGTTCGCAATTATCAGTTCTTGCAGAAGCTATGGGCCTGCATGTGCTATACTATGATATCGTGACAATTATGGCCTTAGGTACTGCCAGACAAGTTTCTACATTAGATGAATTGTTGAATAAATCTGATTTTGTAACACTACATGTACCAGCTACTCCAGAAACTGAAAAAATGTTATCTGCTCCACAATTCGCTGCTATGAAGGACGGGGCTTATGTTATTAATGCCTCAAGAGGTACTGTCGTGGACATTCCATCTCTGATCCAAGCCGTCAAGGCCAACAAAATTGCAGGTGCTGCTTTAGATGTTTATCCACATGAACCAGCTAAGAACGGTGAAGGTTCATTTAACGATGAACTTAACAGCTGGACTTCTGAGTTGGTTTCATTACCAAATATAATCCTGACACCACATATTGGTGGCTCTACAGAAGAAGCTCAAAGTTCAATCGGTATTGAGGTGGCTACTGCATTGTCCAAATACATCAATGAAGGTAACTCTGTCGGTTCTGTGAACTTCCCAGAAGTCAGTTTGAAGTCTTTGGACTACGATCAAGAGAACACAGTACGTGTCTTGTATATTCATCGTAACGTTCCTGGTGTTTTGAAGACCGTTAATGATATCTTATCCGATCATAATATCGAGAAACAGTTTTCTGATTCTCACGGCGAGATCGCTTATCTAATGGCAGACATCTCTTCTGTTAATCAAAGTGAAATCAAGGATATATATGAAAAGTTGAACCAAACTTCTGCCAAAGTTTCCATCAGGTTATTATACTAA","protein_sequence":"MSYSAADNLQDSFQRAMNFSGSPGAVSTSPTQSFMNTLPRRVSITKQPKALKPFSTGDMNILLLENVNATAIKIFKDQGYQVEFHKSSLPEDELIEKIKDVHAIGIRSKTRLTEKILQHARNLVCIGCFCIGTNQVDLKYAASKGIAVFNSPFSNSRSVAELVIGEIISLARQLGDRSIELHTGTWNKVAARCWEVRGKTLGIIGYGHIGSQLSVLAEAMGLHVLYYDIVTIMALGTARQVSTLDELLNKSDFVTLHVPATPETEKMLSAPQFAAMKDGAYVINASRGTVVDIPSLIQAVKANKIAGAALDVYPHEPAKNGEGSFNDELNSWTSELVSLPNIILTPHIGGSTEEAQSSIGIEVATALSKYINEGNSVGSVNFPEVSLKSLDYDQENTVRVLYIHRNVPGVLKTVNDILSDHNIEKQFSDSHGEIAYLMADISSVNQSEIKDIYEKLNQTSAKVSIRLLY"},{"created_at":"2011-05-27T00:35:21.000Z","updated_at":"2011-05-27T15:01:13.000Z","name":"Phosphoglycerate kinase","uniprot_id":"P00560","uniprot_name":"PGK_YEAST","enzyme":true,"transporter":false,"gene_name":"PGK1","num_residues":416,"molecular_weight":"44738.0","theoretical_pi":"7.8","general_function":"Involved in phosphoglycerate kinase activity","specific_function":"ATP + 3-phospho-D-glycerate = ADP + 3-phospho- D-glyceroyl phosphate","reactions":[{"id":1867,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2623,"direction":"\u003e","locations":"Cytoplasm","altext":"ATP + 3-phospho-D-glycerate = ADP + 3-phospho-D-glyceroyl phosphate.","export":false,"pw_reaction_id":null,"source":null},{"id":3814,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006327","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1QPG","cellular_location":"Cytoplasm","genbank_gene_id":"J01342","genbank_protein_id":"1197055","gene_card_id":"PGK1","chromosome_location":"chromosome 3","locus":"YCR012W","synonyms":[],"enzyme_classes":["2.7.2.3"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" phosphoglycerate kinase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" transferase activity, transferring phosphorus-containing groups"},{"category":"Function","description":" kinase activity"},{"category":"Process","description":" small molecule metabolic process"},{"category":"Process","description":" alcohol metabolic process"},{"category":"Process","description":" monosaccharide metabolic process"},{"category":"Process","description":" hexose metabolic process"},{"category":"Process","description":" glucose metabolic process"},{"category":"Process","description":" glucose catabolic process"},{"category":"Process","description":" glycolysis"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"PGK","identifier":"PF00162"}],"pathways":[{"name":"Glycolysis / Gluconeogenesis","kegg_map_id":"00010"}],"gene_sequence":"ATGTCTTTATCTTCAAAGTTGTCTGTCCAAGATTTGGACTTGAAGGACAAGCGTGTCTTCATCAGAGTTGACTTCAACGTCCCATTGGACGGTAAGAAGATCACTTCTAACCAAAGAATTGTTGCTGCTTTGCCAACCATCAAGTACGTTTTGGAACACCACCCAAGATACGTTGTCTTGGCTTCTCACTTGGGTAGACCAAACGGTGAAAGAAACGAAAAATACTCTTTGGCTCCAGTTGCTAAGGAATTGCAATCATTGTTGGGTAAGGATGTCACCTTCTTGAACGACTGTGTCGGTCCAGAAGTTGAAGCCGCTGTCAAGGCTTCTGCCCCAGGTTCCGTTATTTTGTTGGAAAACTTGCGTTACCACATCGAAGAAGAAGGTTCCAGAAAGGTCGATGGTCAAAAGGTCAAGGCTTCCAAGGAAGATGTTCAAAAGTTCAGACACGAATTGAGCTCTTTGGCTGATGTTTACATCAACGATGCCTTCGGTACCGCTCACAGAGCTCACTCTTCTATGGTCGGTTTCGACTTGCCACAACGTGCTGCCGGTTTCTTGTTGGAAAAGGAATTGAAGTACTTCGGTAAGGCTTTGGAGAACCCAACCAGACCATTCTTGGCCATCTTAGGTGGTGCCAAGGTTGCTGACAAGATTCAATTGATTGACAACTTGTTGGACAAGGTCGACTCTATCATCATTGGTGGTGGTATGGCTTTCACCTTCAAGAAGGTTTTGGAAAACACTGAAATCGGTGACTCCATCTTCGACAAGGCTGGTGCTGAAATCGTTCCAAAGTTGATGGAAAAGGCCAAGGCCAAGGGTGTCGAAGTCGTCTTGCCAGTCGACTTCATCATTGCTGATGCTTTCTCTGCTGATGCCAACACCAAGACTGTCACTGACAAGGAAGGTATTCCAGCTGGCTGGCAAGGGTTGGACAATGGTCCAGAATCTAGAAAGTTGTTTGCTGCTACTGTTGCAAAGGCTAAGACCATTGTCTGGAACGGTCCACCAGGTGTTTTCGAATTCGAAAAGTTCGCTGCTGGTACTAAGGCTTTGTTAGACGAAGTTGTCAAGAGCTCTGCTGCTGGTAACACCGTCATCATTGGTGGTGGTGACACTGCCACTGTCGCTAAGAAGTACGGTGTCACTGACAAGATCTCCCATGTCTCTACTGGTGGTGGTGCTTCTTTGGAATTATTGGAAGGTAAGGAATTGCCAGGTGTTGCTTTCTTATCCGAAAAGAAATAA","protein_sequence":"MSLSSKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGRPNGERNEKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFDLPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSEKK"},{"created_at":"2011-05-27T06:54:32.000Z","updated_at":"2011-07-22T17:54:38.000Z","name":"Phosphoglycerate mutase 1","uniprot_id":"P00950","uniprot_name":"PMG1_YEAST","enzyme":true,"transporter":false,"gene_name":"GPM1","num_residues":247,"molecular_weight":"27608.30078","theoretical_pi":"9.34","general_function":"Involved in catalytic activity","specific_function":"Interconversion of 3- and 2-phosphoglycerate with 2,3- bisphosphoglycerate as the primer of the reaction. Can also Catalyze the reaction of EC 5.4.2.4 (synthase) and EC 3.1.3.13 (phosphatase), but with a reduced activity","reactions":[{"id":1467,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1868,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2796,"direction":"\u003e","locations":"Cytoplasm. Nucleus;Cytoplasm","altext":"2-phospho-D-glycerate = 3-phospho-D-glycerate.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1BQ4","cellular_location":null,"genbank_gene_id":"X06408","genbank_protein_id":"1326042","gene_card_id":"GPM1","chromosome_location":"chromosome 11","locus":"YKL152C","synonyms":["PGAM 1","BPG-dependent PGAM 1","MPGM 1","Phosphoglyceromutase 1"],"enzyme_classes":["5.4.2.1"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" isomerase activity"},{"category":"Function","description":" intramolecular transferase activity"},{"category":"Function","description":" intramolecular transferase activity, phosphotransferases"},{"category":"Function","description":" catalytic activity"},{"category":"Process","description":" hexose metabolic process"},{"category":"Process","description":" glucose metabolic process"},{"category":"Process","description":" glucose catabolic process"},{"category":"Process","description":" glycolysis"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" small molecule metabolic process"},{"category":"Process","description":" alcohol metabolic process"},{"category":"Process","description":" monosaccharide metabolic process"}],"pfams":[{"name":"PGAM","identifier":"PF00300"}],"pathways":[{"name":"Glycolysis / Gluconeogenesis","kegg_map_id":"00010"},{"name":"Methane metabolism","kegg_map_id":"00680"},{"name":"Ethanol fermentation","kegg_map_id":null}],"gene_sequence":"CCAAAGTTAGTTTTAGTTAGACACGGTCAATCCGAATGGAACGAAAAGAACTTATTCACCGGTTGGGTTGATGTTAAATTGTCTGCCAAGGGTCAACAAGAAGCCGCTAGAGCCGGTGAATTGTTGAAGGAAAAGAAGGTCTACCCAGACGTCTTGTACACTTCCAAGTTGTCCAGAGCTATCCAAACTGCTAACATTGCTTTGGAAAAGGCTGACAGATTATGGATTCCAGTCAACAGATCCTGGAGATTGAACGAAAGACATTACGGTGACTTACAAGGTAAGGACAAGGCTGAAACTTTGAAGAAGTTCGGTGAAGAAAAATTCAACACCTACAGAAGATCCTTCGATGTTCCACCTCCACCAATCGACGCTTCTTCTCCATTCTCTCAAAAGGGTGATGAAAGATACAAGTACGTTGACCCAAATGTCTTGCCAGAAACTGAATCTTTGGCTTTGGTCATTGACAGATTGTTGCCATACTGGCAAGATGTCATTGCCAAGGACTTGTTGAGTGGTAAGACCGTCATGATCGCCGCTCACGGTAACTCCTTGAGAGGTTTGGTTAAGCACTTGGAAGGTATCTCTGATGCTGACATTGCTAAGTTGAACATCCCAACTGGTATTCCATTGGTCTTCGAATTGGACGAAAACTTGAAGCCATCTAAGCCATCTTACTACTTGGACCCAGAAGCTGCCGCTGCTGGTGCCGCTGCTGTTGCCAACCAAGGTAAGAAATAA","protein_sequence":"MPKLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAKLNIPTGIPLVFELDENLKPSKPSYYLDPEAAAAGAAAVANQGKK"},{"created_at":"2011-05-27T06:55:37.000Z","updated_at":"2011-05-29T05:06:45.000Z","name":"Putative phosphoglycerate mutase DET1","uniprot_id":"Q99288","uniprot_name":"DET1_YEAST","enzyme":true,"transporter":false,"gene_name":"DET1","num_residues":334,"molecular_weight":"39171.80078","theoretical_pi":"7.37","general_function":"Involved in catalytic activity","specific_function":"Involved, either directly or indirectly, in the bidirectional transport of sterols between the endoplasmic reticulum and the plasma membrane","reactions":[{"id":2796,"direction":"\u003e","locations":"Cytoplasm. Nucleus;Cytoplasm","altext":"2-phospho-D-glycerate = 3-phospho-D-glycerate.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm. Nucleus","genbank_gene_id":"Z49209","genbank_protein_id":"798903","gene_card_id":"DET1","chromosome_location":"chromosome 4","locus":"YDR051C","synonyms":["Decreased ergosterol transport protein 1","Phosphoglyceromutase DET1"],"enzyme_classes":["5.4.2.1"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"PGAM","identifier":"PF00300"}],"pathways":[{"name":"Glycolysis / Gluconeogenesis","kegg_map_id":"00010"},{"name":"Methane metabolism","kegg_map_id":"00680"}],"gene_sequence":"ATGTGTGAAGAGAATGTTCATGTTAGTGAAGATGTTGCTGGCAGTCACGGTTCTTTTACGAATGCCAGACCTAGGTTAATTGTACTAATAAGGCATGGGGAAAGCGAATCAAATAAAAACAAGGAGGTCAATGGTTATATTCCTAACCATCTGATTTCTTTAACGAAAACAGGTCAAATCCAAGCTAGACAAGCTGGTATTGACTTATTACGTGTTTTAAACGTAGACGATCACAACTTGGTGGAGGATTTGGCTAAGAAGTATATTAAAGATGAAAGTAGCAGGAGAACTTTACCGCTGAAGGACTATACCAGGCTGAGTAGAGAAAAAGACACAAACATAGTTTTTTATACATCACCCTATAGAAGAGCAAGGGAAACATTGAAAGGTATTTTGGACGTCATCGATGAATATAATGAATTAAACAGTGGTGTTCGTATATGTGAAGATATGAGATATGATCCACATGGTAAACAGAAACATGCATTTTGGCCGAGAGGACTTAATAATACTGGTGGTGTTTACGAAAATAATGAAGATAATATTTGTGAAGGGAAGCCTGGAAAATGTTATCTGCAATATCGGGTTAAGGATGAGCCAAGAATAAGGGAACAAGATTTTGGTAATTTCCAAAAAATCAATAGCATGCAGGACGTTATGAAGAAGAGATCTACGTATGGTCATTTCTTCTTCAGATTCCCTCATGGAGAAAGTGCGGCAGATGTATATGACAGAGTCGCCAGTTTCCAAGAGACTTTATTCAGGCACTTCCATGATAGGCAAGAGAGAAGACCCAGAGATGTTGTTGTCCTAGTTACACATGGTATTTATTCCAGAGTATTCCTGATGAAATGGTTTAGATGGACATACGAAGAGTTTGAATCGTTTACCAATGTTCCTAACGGGAGCGTAATGGTGATGGAACTGGACGAATCCATCAATAGATACGTCCTGAGGACCGTGCTACCCAAATGGACTGATTGTGAGGGAGACCTAACTACATAG","protein_sequence":"MCEENVHVSEDVAGSHGSFTNARPRLIVLIRHGESESNKNKEVNGYIPNHLISLTKTGQIQARQAGIDLLRVLNVDDHNLVEDLAKKYIKDESSRRTLPLKDYTRLSREKDTNIVFYTSPYRRARETLKGILDVIDEYNELNSGVRICEDMRYDPHGKQKHAFWPRGLNNTGGVYENNEDNICEGKPGKCYLQYRVKDEPRIREQDFGNFQKINSMQDVMKKRSTYGHFFFRFPHGESAADVYDRVASFQETLFRHFHDRQERRPRDVVVLVTHGIYSRVFLMKWFRWTYEEFESFTNVPNGSVMVMELDESINRYVLRTVLPKWTDCEGDLTT"},{"created_at":"2011-05-27T06:56:19.000Z","updated_at":"2011-05-27T06:56:19.000Z","name":"Probable phosphoglycerate mutase YOR283W","uniprot_id":"Q12040","uniprot_name":"YO283_YEAST","enzyme":true,"transporter":false,"gene_name":null,"num_residues":230,"molecular_weight":"26176.5","theoretical_pi":"8.12","general_function":"Involved in catalytic activity","specific_function":"Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate","reactions":[{"id":2796,"direction":"\u003e","locations":"Cytoplasm. Nucleus;Cytoplasm","altext":"2-phospho-D-glycerate = 3-phospho-D-glycerate.","export":false,"pw_reaction_id":null,"source":null},{"id":3815,"direction":"\u003c\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006328","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm. Nucleus","genbank_gene_id":"X89633","genbank_protein_id":"1279707","gene_card_id":null,"chromosome_location":null,"locus":"YOR283W","synonyms":["Phosphoglyceromutase YOR283W"],"enzyme_classes":["5.4.2.1"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"PGAM","identifier":"PF00300"}],"pathways":[{"name":"Glycolysis / Gluconeogenesis","kegg_map_id":"00010"},{"name":"Methane metabolism","kegg_map_id":"00680"},{"name":"Glycolysis I","kegg_map_id":null}],"gene_sequence":"ATGACTAAGGAAGTACCATATTATTGCGATAATGACGATAACAACATCATCAGATTATTCATTATTAGGCATGGACAAACAGAACACAATGTAAAAAAAATTTTGCAAGGTCACAAAGATACCTCGATCAATCCTACGGGAGAAGAACAAGCCACTAAATTGGGGCATTACTTGCGTTCAAGAGGTATTCATTTTGATAAGGTTGTCAGTAGTGATTTAAAAAGGTGTAGGCAAACTACGGCTTTAGTTTTGAAACATTCAAAACAAGAAAATGTGCCTACTTCCTATACTTCGGGGTTAAGGGAGCGTTATATGGGTGTTATTGAAGGTATGCAGATTACTGAGGCTGAAAAGTATGCTGATAAACATGGTGAAGGCTCCTTTAGAAATTTTGGGGAAAAAAGTGACGATTTTGTTGCTAGGTTAACTGGATGTGTCGAAGAAGAAGTTGCTGAAGCATCTAATGAAGGTGTCAAGAATCTAGCCCTAGTTAGTCATGGAGGTGCTATCAGAATGATTTTACAATGGTTAAAGTATGAAAATCATCAAGCTCATAAGATCATTGTTTTCAACACCTCTGTCACTATAGTTGATTACGTCAAGGACTCCAAGCAGTTTATTGTGAGACGTGTCGGAAACACCCAACATCTTGGTGATGGCGAATTTGTCGTCAGTGACTTAAGATTACGTTAG","protein_sequence":"MTKEVPYYCDNDDNNIIRLFIIRHGQTEHNVKKILQGHKDTSINPTGEEQATKLGHYLRSRGIHFDKVVSSDLKRCRQTTALVLKHSKQENVPTSYTSGLRERYMGVIEGMQITEAEKYADKHGEGSFRNFGEKSDDFVARLTGCVEEEVAEASNEGVKNLALVSHGGAIRMILQWLKYENHQAHKIIVFNTSVTIVDYVKDSKQFIVRRVGNTQHLGDGEFVVSDLRLR"},{"created_at":"2011-05-27T06:57:59.000Z","updated_at":"2011-05-27T15:01:27.000Z","name":"Phosphoglycerate mutase 3","uniprot_id":"Q12326","uniprot_name":"PMG3_YEAST","enzyme":true,"transporter":false,"gene_name":"GPM3","num_residues":303,"molecular_weight":"34863.19922","theoretical_pi":"6.01","general_function":"Involved in catalytic activity","specific_function":"Could be non-functional","reactions":[{"id":2796,"direction":"\u003e","locations":"Cytoplasm. 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binding"},{"category":"Function","description":" nucleotide binding"},{"category":"Function","description":" oxidoreductase activity"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"2-Hacid_dh","identifier":"PF00389"},{"name":"2-Hacid_dh_C","identifier":"PF02826"}],"pathways":[{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"},{"name":"Methane metabolism","kegg_map_id":"00680"},{"name":"glycine metabolism","kegg_map_id":null},{"name":"serine 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