{"ymdb_id":"YMDB00353","created_at":"2011-05-29T18:08:55.000Z","updated_at":"2016-10-18T17:11:27.000Z","name":"Ornithine","cas":"70-26-8","state":"Solid","melting_point":"140 oC","description":"Ornithine is a non-proteinogenic amino acid that plays a role in the urea cycle. It is also a precursor of citrulline and arginine.","experimental_water_solubility":"620 mg/mL [HMP experimental]","experimental_logp_hydrophobicity":"-4.22 [SANGSTER (1994)]","location":"Cytoplasm, Extracellular, Mitochondrion","synthesis_reference":"Zhang, Peng; Zhang, Shurong; Liu, Chunqiao; Yang, Yuhong.  Method for preparing L-ornithine by enzymatic conversion.    Faming Zhuanli Shenqing Gongkai Shuomingshu  (2007),     8pp.","chebi_id":"15729","hmdb_id":"HMDB00214","kegg_id":"C01602","pubchem_id":"6262","cs_id":"6026","foodb_id":null,"wikipedia_link":"Ornithine","biocyc_id":"L-ORNITHINE","iupac":"(2S)-2,5-diaminopentanoic acid","traditional_iupac":"ornithine","logp":"-3.6582876081320586","pka":null,"alogps_solubility":"1.72e+02 g/l","alogps_logp":"-3.64","alogps_logs":"0.11","acceptor_count":"4","donor_count":"3","rotatable_bond_count":"4","polar_surface_area":"89.34","refractivity":"33.20850000000001","polarizability":"13.85326140764592","formal_charge":"0","physiological_charge":"1","pka_strongest_basic":"10.2868213384358","pka_strongest_acidic":"2.666422703275891","bioavailability":"1","number_of_rings":"0","rule_of_five":"1","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"0","synonyms":["(+)-S-Ornithine","(S)-2,5-Diaminopentanoate","(S)-2,5-Diaminopentanoic acid","(S)-a,d-Diaminovalerate","(S)-a,d-Diaminovaleric acid","(S)-Ornithine","5-amino-L-Norvaline","L-(-)-Ornithine","L-Ornithine"],"pathways":[{"name":"beta-Alanine metabolism","kegg_map_id":"00410"},{"name":"Glutamate Metabolism","kegg_map_id":null}],"growth_conditions":[{"growth_media":"YEB media with 0.5 mM glucose","concentration":"132.0","concentration_units":"\u0026#181;M","error":"7.0"},{"growth_media":"Minimal medium  supplemented with ammonium and glucose","concentration":"7000.0","concentration_units":"\u0026#181;M","error":"0.0"},{"growth_media":"Minimal medium  supplemented with arginine and glucose","concentration":"20000.0","concentration_units":"\u0026#181;M","error":"0.0"},{"growth_media":"Minimal medium  supplemented with ornithine and glucose","concentration":"330000.0","concentration_units":"\u0026#181;M","error":"0.0"},{"growth_media":"Minimal medium  supplemented with citrulline and glucose","concentration":"22000.0","concentration_units":"\u0026#181;M","error":"0.0"},{"growth_media":"Glucose limited aerobic culture","concentration":"4.1","concentration_units":"umol/g DW","error":"0.0"}],"references":[{"pubmed_id":21051339,"citation":"UniProt Consortium (2011). \"Ongoing and future developments at the Universal Protein Resource.\" Nucleic Acids Res 39:D214-D219."},{"pubmed_id":21062828,"citation":"Scheer, M., Grote, A., Chang, A., Schomburg, I., Munaretto, C., Rother, M., Sohngen, C., Stelzer, M., Thiele, J., Schomburg, D. (2011). \"BRENDA, the enzyme information system in 2011.\" Nucleic Acids Res 39:D670-D676."},{"pubmed_id":11553611,"citation":"Abadjieva, A., Pauwels, K., Hilven, P., Crabeel, M. (2001). \"A new yeast metabolon involving at least the two first enzymes of arginine biosynthesis: acetylglutamate synthase activity requires complex formation with acetylglutamate kinase.\" J Biol Chem 276:42869-42880."},{"pubmed_id":6370999,"citation":"Eisenstein, E., Osborne, J. C. Jr, Chaiken, I. M., Hensley, P. (1984). \"Purification and characterization of ornithine transcarbamoylase from Saccharomyces cerevisiae.\" J Biol Chem 259:5139-5145."},{"pubmed_id":18625006,"citation":"Pirkov, I., Norbeck, J., Gustafsson, L., Albers, E. (2008). \"A complete inventory of all enzymes in the eukaryotic methionine salvage pathway.\" FEBS J 275:4111-4120."},{"pubmed_id":4578278,"citation":"Gancedo, J. M., Gancedo, C. (1973). \"Concentrations of intermediary metabolites in yeast.\" Biochimie 55:205-211."}],"proteins":[{"created_at":"2011-05-24T19:44:45.000Z","updated_at":"2011-07-22T17:54:11.000Z","name":"Arginase","uniprot_id":"P00812","uniprot_name":"ARGI_YEAST","enzyme":true,"transporter":false,"gene_name":"CAR1","num_residues":333,"molecular_weight":"35661.60156","theoretical_pi":"5.38","general_function":"Involved in arginase activity","specific_function":"L-arginine + H(2)O = L-ornithine + urea","reactions":[{"id":1326,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2269,"direction":"\u003e","locations":"Cytoplasmic","altext":"L-arginine + H(2)O = L-ornithine + urea.","export":false,"pw_reaction_id":null,"source":null},{"id":3740,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006267","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasmic","genbank_gene_id":"M10110","genbank_protein_id":"171161","gene_card_id":"CAR1","chromosome_location":"chromosome 16","locus":"YPL111W","synonyms":[],"enzyme_classes":["3.5.3.1"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" binding"},{"category":"Function","description":" ion binding"},{"category":"Function","description":" cation binding"},{"category":"Function","description":" metal ion binding"},{"category":"Function","description":" hydrolase activity"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines"},{"category":"Function","description":" arginase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"},{"category":"Process","description":" glutamine family amino acid metabolic process"},{"category":"Process","description":" arginine metabolic process"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"Arginase","identifier":"PF00491"}],"pathways":[{"name":"Arginine and proline metabolism","kegg_map_id":"00330"},{"name":"Glutamate Metabolism","kegg_map_id":null}],"gene_sequence":"ATGGAAACAGGACCTCATTACAACTACTACAAAAATCGCGAATTGTCCATCGTTCTGGCTCCATTCAGCGGCGGTCAGGGTAAGCTTGGTGTCGAGAAGGGCCCTAAATACATGCTTAAGCATGGTCTGCAAACAAGCATAGAGGATTTGGGCTGGTCTACGGAATTAGAGCCCTCAATGGACGAGGCCCAATTTGTGGGAAAGTTGAAAATGGAGAAGGACTCCACAACTGGGGGTTCCTCTGTTATGATAGACGGTGTCAAGGCTAAAAGAGCAGATTTGGTTGGTGAAGCCACCAAGTTGGTGTACAACTCCGTGTCGAAAGTGGTCCAGGCGAACAGATTCCCCTTGACCTTGGGTGGTGATCATTCAATAGCCATTGGTACTGTATCCGCGGTTTTGGACAAATACCCCGATGCTGGTCTTTTATGGATAGACGCCCACGCTGATATAAACACCATAGAAAGCACCCCCTCTGGAAACTTGCACGGCTGTCCCGTGTCATTCCTAATGGGTTTGAACAAGGATGTCCCACATTGTCCCGAGTCGCTCAAATGGGTTCCAGGCAACTTGAGCCCAAAAAAGATCGCGTATATTGGGTTGAGAGATGTTGATGCCGGAGAAAAGAAAATCTTGAAAGATCTGGGTATCGCCGCCTTTTCCATGTACCACGTTGACAAATACGGCATCAACGCTGTCATTGAAATGGCAATGAAAGCCGTGCACCCAGAAACAAACGGTGAAGGTCCCATTATGTGCTCCTATGACGTCGATGGTGTAGACCCATTATACATTCCTGCTACAGGTACTCCAGTGAGAGGTGGGTTGACCTTGAGAGAAGGTCTTTTCTTGGTGGAAAGATTGGCCGAATCCGGTAATTTAATTGCGCTAGACGTTGTTGAATGTAACCCTGATCTGGCTATTCATGATATCCATGTTTCAAACACCATCTCTGCAGGTTGCGCCATTGCAAGGTGTGCATTGGGTGAAACCTTATTGTAG","protein_sequence":"METGPHYNYYKNRELSIVLAPFSGGQGKLGVEKGPKYMLKHGLQTSIEDLGWSTELEPSMDEAQFVGKLKMEKDSTTGGSSVMIDGVKAKRADLVGEATKLVYNSVSKVVQANRFPLTLGGDHSIAIGTVSAVLDKYPDAGLLWIDAHADINTIESTPSGNLHGCPVSFLMGLNKDVPHCPESLKWVPGNLSPKKIAYIGLRDVDAGEKKILKDLGIAAFSMYHVDKYGINAVIEMAMKAVHPETNGEGPIMCSYDVDGVDPLYIPATGTPVRGGLTLREGLFLVERLAESGNLIALDVVECNPDLAIHDIHVSNTISAGCAIARCALGETLL"},{"created_at":"2011-05-24T20:44:57.000Z","updated_at":"2011-05-27T14:56:01.000Z","name":"Arginine biosynthesis bifunctional protein ArgJ, mitochondrial","uniprot_id":"Q04728","uniprot_name":"ARGJ_YEAST","enzyme":true,"transporter":false,"gene_name":"ARG7","num_residues":441,"molecular_weight":"47848.30078","theoretical_pi":"7.18","general_function":"Involved in glutamate N-acetyltransferase activity","specific_function":"Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis:the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate","reactions":[{"id":1755,"direction":"\u003e","locations":"mitochondrion","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1806,"direction":"\u003e","locations":"mitochondrion","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2339,"direction":"\u003e","locations":"Mitochondrion matrix","altext":"N(2)-acetyl-L-ornithine + L-glutamate = L-ornithine + N-acetyl-L-glutamate.","export":false,"pw_reaction_id":null,"source":null},{"id":2340,"direction":"\u003e","locations":"Mitochondrion matrix;Mitochondrion","altext":"Acetyl-CoA + L-glutamate = CoA + N-acetyl-L-glutamate.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Mitochondrion matrix","genbank_gene_id":"U90438","genbank_protein_id":"1895091","gene_card_id":"ARG7","chromosome_location":"chromosome 13","locus":"YMR062C","synonyms":["Extracellular mutant protein 40","Glutamate N-acetyltransferase","GAT","Ornithine acetyltransferase","OATase","Ornithine transacetylase","Amino-acid acetyltransferase","N-acetylglutamate synthase","AGS","Arginine biosynthesis bifunctional protein ArgJ alpha chain","Arginine biosynthesis bifunctional protein ArgJ beta chain"],"enzyme_classes":["2.3.1.35","2.3.1.1"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" transferase activity, transferring acyl groups"},{"category":"Function","description":" transferase activity, transferring acyl groups other than amino-acyl groups"},{"category":"Function","description":" acyltransferase activity"},{"category":"Function","description":" acetyl-CoA:L-glutamate N-acetyltransferase activity"},{"category":"Function","description":" acetyltransferase activity"},{"category":"Function","description":" N-acetyltransferase activity"},{"category":"Function","description":" glutamate N-acetyltransferase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"},{"category":"Process","description":" glutamine family amino acid metabolic process"},{"category":"Process","description":" arginine metabolic process"},{"category":"Process","description":" arginine biosynthetic process"}],"pfams":[{"name":"ArgJ","identifier":"PF01960"}],"pathways":[{"name":"Arginine and proline metabolism","kegg_map_id":"00330"}],"gene_sequence":"ATGAGAATATCATCAACATTGCTTCAACGCTCGAAGCAGCTTATAGATAAGTATGCATTATACGTGCCCAAGACGGGCTCTTTTCCTAAAGGATTTGAAGTAGGCTACACTGCATCTGGAGTCAAAAAAAACGGGAGCCTGGACCTGGGTGTAATCTTGAATACCAATAAATCTCGTCCTTCAACCGCAGCAGCTGTTTTCACGACCAATAAATTCAAAGCTGCGCCAGTTTTGACATCGAAAAAAGTCCTTGAAACTGCTCGTGGTAAAAACATCAACGCTATTGTAGTCAATTCCGGTTGTGCTAACTCGGTCACAGGTGATCTTGGTATGAAAGATGCCCAAGTAATGATTGATTTGGTTAACGATAAAATTGGTCAAAAAAATTCTACCCTAGTCATGTCTACAGGCGTTATTGGACAACGACTACAGATGGACAAGATCAGCACTGGTATCAATAAAATTTTTGGAGAAGAAAAGTTCGGCAGTGATTTTAACTCTTGGTTGAACGTAGCCAAATCAATCTGTACTACTGATACTTTCCCAAAATTAGTTACATCTAGATTCAAATTACCTAGTGGTACTGAGTATACTTTGACAGGTATGGCAAAGGGCGCGGGTATGATTTGTCCGAATATGGCTACCTTATTAGGTTTCATAGTTACAGATCTTCCTATTGAAAGCAAGGCGTTGCAGAAGATGCTGACTTTCGCTACTACCCGTTCATTTAATTGTATATCGGTGGACGGTGATATGAGCACCAATGACACAATTTGCATGTTGGCCAACGGTGCTATTGACACCAAAGAAATTAACGAAGACTCTAAAGATTTTGAACAAGTAAAATTGCAGGTCACAGAATTTGCTCAGCGCTTGGCCCAGTTAGTCGTTCGCGATGGTGAAGGTTCGACAAAGTTTGTTACTGTTAACGTTAAAAATGCTTTGCATTTTGAAGACGCCAAAATAATTGCTGAATCAATCTCAAACTCTATGTTGGTCAAAACCGCACTATATGGGCAAGATGCCAATTGGGGAAGAATATTGTGCGCGATCGGGTATGCAAAGCTGAATGACTTAAAATCTCTAGATGTCAACAAAATTAATGTTAGCTTTATTGCTACCGACAATTCAGAACCTCGTGAGCTGAAGCTTGTCGCTAATGGTGTGCCACAATTGGAGATCGATGAAACAAGGGCTTCTGAAATATTGGCTTTGAATGATTTGGAAGTGTCTGTCGACTTGGGAACCGGTGATCAGGCAGCACAATTTTGGACTTGTGATTTATCACATGAATATGTAACAATTAACGGTGATTACCGTTCATAA","protein_sequence":"MRISSTLLQRSKQLIDKYALYVPKTGSFPKGFEVGYTASGVKKNGSLDLGVILNTNKSRPSTAAAVFTTNKFKAAPVLTSKKVLETARGKNINAIVVNSGCANSVTGDLGMKDAQVMIDLVNDKIGQKNSTLVMSTGVIGQRLQMDKISTGINKIFGEEKFGSDFNSWLNVAKSICTTDTFPKLVTSRFKLPSGTEYTLTGMAKGAGMICPNMATLLGFIVTDLPIESKALQKMLTFATTRSFNCISVDGDMSTNDTICMLANGAIDTKEINEDSKDFEQVKLQVTEFAQRLAQLVVRDGEGSTKFVTVNVKNALHFEDAKIIAESISNSMLVKTALYGQDANWGRILCAIGYAKLNDLKSLDVNKINVSFIATDNSEPRELKLVANGVPQLEIDETRASEILALNDLEVSVDLGTGDQAAQFWTCDLSHEYVTINGDYRS"},{"created_at":"2011-05-26T16:52:31.000Z","updated_at":"2011-05-27T15:01:01.000Z","name":"Ornithine carbamoyltransferase","uniprot_id":"P05150","uniprot_name":"OTC_YEAST","enzyme":true,"transporter":false,"gene_name":"ARG3","num_residues":338,"molecular_weight":"37844.80078","theoretical_pi":"6.24","general_function":"Involved in carboxyl- or carbamoyltransferase activity","specific_function":"Carbamoyl phosphate + L-ornithine = phosphate + L-citrulline","reactions":[{"id":1804,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2450,"direction":"\u003e","locations":"Cytoplasm","altext":"Carbamoyl phosphate + L-ornithine = phosphate + L-citrulline.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm","genbank_gene_id":"M11946","genbank_protein_id":"171075","gene_card_id":"ARG3","chromosome_location":"chromosome 10","locus":"YJL088W","synonyms":["Ornithine transcarbamylase","OTCase"],"enzyme_classes":["2.1.3.3"],"go_classes":[{"category":"Component","description":" macromolecular complex"},{"category":"Component","description":" protein complex"},{"category":"Component","description":" ornithine carbamoyltransferase complex"},{"category":"Function","description":" transferase activity, transferring one-carbon groups"},{"category":"Function","description":" binding"},{"category":"Function","description":" carboxylic acid binding"},{"category":"Function","description":" amino acid binding"},{"category":"Function","description":" carboxyl- or carbamoyltransferase activity"},{"category":"Function","description":" ornithine carbamoyltransferase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"}],"pfams":[{"name":"OTCace","identifier":"PF00185"},{"name":"OTCace_N","identifier":"PF02729"}],"pathways":[{"name":"Arginine and proline metabolism","kegg_map_id":"00330"}],"gene_sequence":"ATGTCAACCACAGCATCCACGCCTTCATCTTTACGTCATTTGATTTCTATAAAAGATCTTTCTGATGAAGAATTCAGAATCTTAGTACAAAGAGCTCAACATTTCAAGAATGTTTTTAAAGCAAATAAAACGAATGATTTCCAATCCAACCATCTGAAACTATTGGGTAGAACTATAGCCTTAATATTTACTAAAAGATCAACTAGAACGAGAATTTCGACCGAAGGTGCAGCCACCTTCTTTGGTGCCCAACCGATGTTTTTAGGTAAAGAGGATATTCAGCTTGGTGTCAATGAATCATTTTACGATACCACCAAGGTTGTATCATCTATGGTTTCATGTATTTTTGCCCGTGTGAACAAACATGAAGACATACTTGCTTTTTGCAAGGATTCCTCTGTACCGATCATCAACTCTCTATGTGACAAATTCCACCCTTTGCAAGCAATTTGTGATCTTTTAACAATAATCGAAAACTTCAATATATCTCTAGATGAAGTAAATAAGGGAATCAATTCAAAATTGAAGATGGCATGGATTGGTGATGCCAATAATGTCATAAATGATATGTGCATCGCATGTCTGAAATTCGGTATAAGTGTCAGTATTTCCACTCCCCCCGGTATTGAAATGGATTCCGATATTGTCGATGAAGCAAAGAAAGTTGCTGAGAGAAACGGTGCGACATTTGAATTAACACACGACTCTTTAAAGGCCTCCACCAATGCCAATATATTAGTAACCGATACTTTCGTTTCCATGGGTGAAGAATTTGCGAAACAGGCCAAGCTGAAACAATTCAAAGGTTTTCAAATCAATCAAGAACTTGTCTCTGTGGCTGATCCAAACTACAAATTTATGCATTGTCTGCCAAGACATCAAGAAGAAGTTAGTGATGATGTCTTTTATGGAGAGCATTCCATAGTCTTTGAAGAAGCAGAAAACAGATTATATGCAGCTATGTCTGCCATTGATATCTTTGTTAATAATAAAGGTAATTTCAAGGACTTGAAATAA","protein_sequence":"MSTTASTPSSLRHLISIKDLSDEEFRILVQRAQHFKNVFKANKTNDFQSNHLKLLGRTIALIFTKRSTRTRISTEGAATFFGAQPMFLGKEDIQLGVNESFYDTTKVVSSMVSCIFARVNKHEDILAFCKDSSVPIINSLCDKFHPLQAICDLLTIIENFNISLDEVNKGINSKLKMAWIGDANNVINDMCIACLKFGISVSISTPPGIEMDSDIVDEAKKVAERNGATFELTHDSLKASTNANILVTDTFVSMGEEFAKQAKLKQFKGFQINQELVSVADPNYKFMHCLPRHQEEVSDDVFYGEHSIVFEEAENRLYAAMSAIDIFVNNKGNFKDLK"},{"created_at":"2011-05-27T02:22:08.000Z","updated_at":"2011-05-27T15:01:17.000Z","name":"Ornithine decarboxylase","uniprot_id":"P08432","uniprot_name":"DCOR_YEAST","enzyme":true,"transporter":false,"gene_name":"SPE1","num_residues":466,"molecular_weight":"52284.80078","theoretical_pi":"5.22","general_function":"Involved in catalytic activity","specific_function":"L-ornithine = putrescine + CO(2)","reactions":[{"id":1805,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2672,"direction":"\u003e","locations":null,"altext":"L-ornithine = putrescine + CO(2).","export":false,"pw_reaction_id":null,"source":null},{"id":3758,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006282","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":"J02777","genbank_protein_id":"172070","gene_card_id":"SPE1","chromosome_location":"chromosome 11","locus":"YKL184W","synonyms":["ODC"],"enzyme_classes":["4.1.1.17"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Process","description":" cellular amino acid derivative metabolic process"},{"category":"Process","description":" cellular biogenic amine metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" polyamine metabolic process"},{"category":"Process","description":" polyamine biosynthetic process"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"Orn_Arg_deC_N","identifier":"PF02784"},{"name":"Orn_DAP_Arg_deC","identifier":"PF00278"}],"pathways":[{"name":"Arginine and proline metabolism","kegg_map_id":"00330"},{"name":"Glutathione metabolism","kegg_map_id":"00480"},{"name":"beta-Alanine metabolism","kegg_map_id":"00410"}],"gene_sequence":"ATGTCTAGTACTCAAGTAGGAAATGCTCTATCTAGTTCCACTACTACTTTAGTGGACTTGTCTAATTCTACGGTTACCCAAAAGAAGCAATATTATAAAGATGGCGAGACGCTGCACAATCTTTTGCTTGAACTAAAGAATAACCAAGATTTGGAACTTTTACCGCATGAACAAGCGCATCCTAAAATATTTCAAGCGCTCAAGGCTCGTATTGGTAGAATTAATAATGAAACGTGCGACCCCGGTGAGGAGAACTCGTTTTTCATATGCGATTTGGGAGAAGTCAAGAGATTATTCAACAACTGGGTGAAGGAGCTTCCTAGAATTAAGCCATTTTATGCCGTCAAATGTAATCCTGATACCAAGGTTTTGTCATTATTAGCAGAGTTGGGCGTTAATTTCGATTGCGCTTCCAAAGTGGAAATTGACAGAGTATTATCGATGAACATCTCGCCGGATAGAATTGTTTACGCTAATCCTTGTAAAGTAGCATCTTTCATTAGATATGCAGCTTCAAAAAATGTAATGAAGTCTACTTTTGACAATGTAGAAGAATTGCATAAAATCAAAAAGTTTCATCCTGAGTCTCAGTTGTTATTAAGAATCGCTACCGATGACTCTACCGCTCAATGTCGACTTTCCACCAAATATGGCTGTGAAATGGAAAACGTAGACGTTTTATTAAAGGCTATAAAGGAACTAGGTTTAAACCTGGCTGGTGTTTCTTTCCACGTCGGTTCAGGCGCTTCTGATTTTACAAGCTTATACAAAGCCGTTAGAGATGCAAGAACGGTATTTGACAAAGCTGCTAACGAATACGGGTTGCCCCCTTTGAAGATTTTGGATGTAGGTGGTGGATTTCAATTTGAATCCTTCAAAGAATCAACTGCTGTTTTGCGTCTAGCGCTAGAGGAATTTTTCCCTGTAGGTTGTGGTGTTGATATAATTGCAGAGCCTGGCAGATACTTTGTAGCTACAGCGTTCACTTTGGCATCTCATGTGATTGCGAAGAGAAAACTGTCTGAGAATGAAGCAATGATTTACACTAACGATGGTGTATACGGGAACATGAATTGTATTTTATTCGATCATCAAGAGCCCCATCCAAGAACCCTTTATCATAATTTGGAATTTCATTACGACGATTTTGAATCCACTACTGCGGTCCTCGACTCTATCAACAAAACAAGATCTGAGTATCCATATAAAGTTTCCATCTGGGGACCCACATGTGATGGTTTGGATTGTATTGCCAAAGAGTATTACATGAAGCATGATGTTATAGTCGGTGATTGGTTTTATTTTCCTGCCCTGGGTGCCTACACATCATCGGCGGCTACTCAATTCAACGGCTTTGAGCAGACTGCGGATATAGTATACATAGACTCTGAACTCGATTGA","protein_sequence":"MSSTQVGNALSSSTTTLVDLSNSTVTQKKQYYKDGETLHNLLLELKNNQDLELLPHEQAHPKIFQALKARIGRINNETCDPGEENSFFICDLGEVKRLFNNWVKELPRIKPFYAVKCNPDTKVLSLLAELGVNFDCASKVEIDRVLSMNISPDRIVYANPCKVASFIRYAASKNVMKSTFDNVEELHKIKKFHPESQLLLRIATDDSTAQCRLSTKYGCEMENVDVLLKAIKELGLNLAGVSFHVGSGASDFTSLYKAVRDARTVFDKAANEYGLPPLKILDVGGGFQFESFKESTAVLRLALEEFFPVGCGVDIIAEPGRYFVATAFTLASHVIAKRKLSENEAMIYTNDGVYGNMNCILFDHQEPHPRTLYHNLEFHYDDFESTTAVLDSINKTRSEYPYKVSIWGPTCDGLDCIAKEYYMKHDVIVGDWFYFPALGAYTSSAATQFNGFEQTADIVYIDSELD"},{"created_at":"2011-05-27T07:03:07.000Z","updated_at":"2011-05-27T15:01:27.000Z","name":"Ornithine aminotransferase","uniprot_id":"P07991","uniprot_name":"OAT_YEAST","enzyme":true,"transporter":false,"gene_name":"CAR2","num_residues":424,"molecular_weight":"46085.60156","theoretical_pi":"6.95","general_function":"Involved in transaminase activity","specific_function":"L-ornithine + a 2-oxo acid = L-glutamate 5- semialdehyde + an L-amino acid","reactions":[{"id":1807,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2799,"direction":"\u003e","locations":"Cytoplasm","altext":"L-ornithine + a 2-oxo acid = L-glutamate 5-semialdehyde + an L-amino acid.","export":false,"pw_reaction_id":null,"source":null},{"id":3741,"direction":"\u003c\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006268","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm","genbank_gene_id":"U21094","genbank_protein_id":"665969","gene_card_id":"CAR2","chromosome_location":"chromosome 12","locus":"YLR438W","synonyms":["Ornithine--oxo-acid aminotransferase"],"enzyme_classes":["2.6.1.13"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" binding"},{"category":"Function","description":" transferase activity, transferring nitrogenous groups"},{"category":"Function","description":" transaminase activity"},{"category":"Function","description":" cofactor binding"},{"category":"Function","description":" pyridoxal phosphate binding"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Process","description":" Not Available"}],"pfams":[{"name":"Aminotran_3","identifier":"PF00202"}],"pathways":[{"name":"Arginine and proline metabolism","kegg_map_id":"00330"},{"name":"Glutamate Metabolism","kegg_map_id":null}],"gene_sequence":"ATGTCCGAAGCTACCCTCTCCTCCAAGCAAACCATTGAATGGGAAAACAAATACTCCGCCCACAACTACCACCCCTTGCCCGTCGTTTTTCACAAGGCTAAGGGCGCACATGTGTGGGACCCGGAGGGTAAGCTGTACCTCGACTTCCTGAGCGCTTATTCTGCCGTCAACCAGGGCCATTGCCATCCTCACATCATCAAGGCTTTGACGGAGCAAGCACAAACACTAACATTGTCCTCCAGAGCGTTCCACAACGATGTTTACGCGCAATTCGCCAAGTTCGTGACCGAATTCTTCGGGTTCGAAACCGTTTTGCCCATGAACACCGGTGCAGAAGCCGTGGAAACTGCTTTGAAGTTGGCCAGAAGATGGGGGTACATGAAGAAGAACATCCCTCAAGATAAAGCCATCATTCTGGGTGCCGAGGGTAACTTCCACGGGAGAACCTTCGGTGCTATCAGTTTGAGTACCGACTACGAGGACTCCAAGTTGCATTTCGGGCCTTTCGTGCCTAACGTTGCCAGTGGTCACTCCGTGCACAAGATCAGATACGGCCACGCAGAAGATTTCGTCCCTATCTTGGAATCTCCTGAAGGTAAGAACGTTGCCGCCATCATTCTAGAGCCAATTCAGGGTGAAGCCGGTATCGTCGTGCCCCCCGCAGACTACTTCCCAAAGGTCTCCGCATTATGCCGTAAGCACAACGTCCTATTGATCGTTGACGAAATTCAAACCGGTATCGGTAGAACCGGTGAGTTGCTTTGCTACGACCACTACAAGGCAGAGGCCAAGCCTGATATTGTTTTGTTAGGTAAGGCTCTCTCAGGTGGTGTTCTTCCCGTCTCATGTGTTCTGTCTTCTCACGACATCATGTCTTGCTTTACCCCAGGATCTCACGGTTCTACTTTCGGCGGTAATCCTTTGGCTTCCCGCGTTGCCATCGCCGCCCTCGAGGTCATCCGCGACGAGAAGCTGTGCCAAAGAGCCGCCCAACTGGGTAGCTCTTTCATCGCCCAATTGAAAGCTCTCCAAGCCAAATCTAACGGTATAATCTCTGAGGTGCGTGGTATGGGACTGCTTACCGCCATCGTAATCGACCCATCCAAGGCCAATGGTAAGACCGCTTGGGACTTGTGTCTATTGATGAAGGATCACGGCCTCTTGGCTAAGCCCACCCACGACCACATCATCAGATTGGCTCCTCCTTTGGTCATCTCCGAAGAGGACTTGCAAACCGGTGTCGAAACCATTGCCAAGTGTATCGATCTGTTATAA","protein_sequence":"MSEATLSSKQTIEWENKYSAHNYHPLPVVFHKAKGAHVWDPEGKLYLDFLSAYSAVNQGHCHPHIIKALTEQAQTLTLSSRAFHNDVYAQFAKFVTEFFGFETVLPMNTGAEAVETALKLARRWGYMKKNIPQDKAIILGAEGNFHGRTFGAISLSTDYEDSKLHFGPFVPNVASGHSVHKIRYGHAEDFVPILESPEGKNVAAIILEPIQGEAGIVVPPADYFPKVSALCRKHNVLLIVDEIQTGIGRTGELLCYDHYKAEAKPDIVLLGKALSGGVLPVSCVLSSHDIMSCFTPGSHGSTFGGNPLASRVAIAALEVIRDEKLCQRAAQLGSSFIAQLKALQAKSNGIISEVRGMGLLTAIVIDPSKANGKTAWDLCLLMKDHGLLAKPTHDHIIRLAPPLVISEEDLQTGVETIAKCIDLL"}]}