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| Identification |
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| YMDB ID | YMDB00270 |
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| Name | Glyceric acid 1,3-biphosphate |
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| Species | Saccharomyces cerevisiae |
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| Strain | Baker's yeast |
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| Description | 1,3-Bisphosphoglycerate (1,3BPG) is a 3-carbon organic molecule present in most, if not all, living organisms. It primarily exists as a metabolic intermediate in both glycolysis during respiration and the Calvin cycle during photosynthesis. 1,3BPG is a transitional stage between glycerate 3-phosphate and glyceraldehyde 3-phosphate during the fixation/reduction of CO2. 1,3BPG is also a precursor to 2,3-bisphosphoglycerate which in turn is a reaction intermediate in the glycolytic pathway. |
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| Structure | |
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| Synonyms | - 1,3-Biphosphoglycerate
- 1,3-Biphosphoglyceric acid
- 1,3-bis-phosphoglycerate
- 1,3-Bisphosphoglycerate
- 1,3-diphosphateglycerate
- 1,3-Diphosphoglycerate
- 13-DPG
- 2-hydroxy-3-(phosphonooxy)-Propanoate
- 2-hydroxy-3-(phosphonooxy)-Propanoic acid
- 2-hydroxy-3-(phosphonooxy)-Propanoic acid 1-anhydride with phosphorate
- 2-hydroxy-3-(phosphonooxy)-Propanoic acid 1-anhydride with phosphoric acid
- 3-P-glyceroyl-P
- 3-Phospho-D-glyceroyl phosphate
- 3-phospho-D-glyceroyl-phosphate
- 3-Phosphoglyceroyl phosphate
- 3-phosphoglyceroyl-P
- 3-phosphoglyceroyl-phosphate
- DPG
- Glycerate 1,3-Biphosphate
- glycerate 1,3-bisphosphate
- glycerate 1,3-diphosphate
- Glyceric acid 1,3-biphosphate
- Glyceric acid 1,3-biphosphic acid
- P-glyceroyl-P
- Phosphoglyceroyl-P
- Glyceric acid 1,3-biphosphoric acid
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| CAS number | 1981-49-3 |
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| Weight | Average: 266.0371
Monoisotopic: 265.9592695 |
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| InChI Key | LJQLQCAXBUHEAZ-UHFFFAOYSA-N |
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| InChI | InChI=1S/C3H8O10P2/c4-2(1-12-14(6,7)8)3(5)13-15(9,10)11/h2,4H,1H2,(H2,6,7,8)(H2,9,10,11) |
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| IUPAC Name | {[2-hydroxy-3-(phosphonooxy)propanoyl]oxy}phosphonic acid |
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| Traditional IUPAC Name | 1,3-bisphosphoglycerate |
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| Chemical Formula | C3H8O10P2 |
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| SMILES | [H]OC([H])(C(=O)OP(=O)(O[H])O[H])C([H])([H])OP(=O)(O[H])O[H] |
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| Chemical Taxonomy |
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| Description | belongs to the class of organic compounds known as acyl monophosphates. These are organic compounds containing a monophosphate linked to an acyl group. They have the general structure R-CO-P(O)(O)OH, R=H or organyl. |
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| Kingdom | Organic compounds |
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| Super Class | Organic acids and derivatives |
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| Class | Organic phosphoric acids and derivatives |
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| Sub Class | Phosphate esters |
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| Direct Parent | Acyl monophosphates |
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| Alternative Parents | |
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| Substituents | - Acyl monophosphate
- Glyceric_acid
- Monoalkyl phosphate
- Monosaccharide
- Alkyl phosphate
- Carboxylic acid salt
- Secondary alcohol
- Monocarboxylic acid or derivatives
- Carboxylic acid derivative
- Organic oxide
- Organooxygen compound
- Organic oxygen compound
- Alcohol
- Carbonyl group
- Hydrocarbon derivative
- Organic salt
- Aliphatic acyclic compound
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| Molecular Framework | Aliphatic acyclic compounds |
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| External Descriptors | Not Available |
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| Physical Properties |
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| State | Solid |
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| Charge | 0 |
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| Melting point | Not Available |
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| Experimental Properties | | Property | Value | Reference |
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| Water Solubility | Not Available | PhysProp | | LogP | Not Available | PhysProp |
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| Predicted Properties | |
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| Biological Properties |
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| Cellular Locations | Not Available |
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| Organoleptic Properties | Not Available |
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| SMPDB Pathways | |
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| KEGG Pathways | | Glycolysis / Gluconeogenesis | ec00010 |  | | Starch and sucrose metabolism | ec00500 |  |
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| SMPDB Reactions | |
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| KEGG Reactions | Not Available |
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| Concentrations |
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| Intracellular Concentrations | | Intracellular Concentration | Substrate | Growth Conditions | Strain | Citation |
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| 100 ± 0 µM | Minimal medium supplemented with ammonia salts | aerobic;resting cells | Baker's yeast | PMID: 4578278 | | 30 ± 0 µM | Minimal medium supplemented with ammonia salts and glucose | aerobic;resting cells | Baker's yeast | PMID: 4578278 | | Conversion Details Here |
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| Extracellular Concentrations | Not Available |
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| Spectra |
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| Spectra | |
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| References |
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| References: | - UniProt Consortium (2011). "Ongoing and future developments at the Universal Protein Resource." Nucleic Acids Res 39:D214-D219.21051339
- Scheer, M., Grote, A., Chang, A., Schomburg, I., Munaretto, C., Rother, M., Sohngen, C., Stelzer, M., Thiele, J., Schomburg, D. (2011). "BRENDA, the enzyme information system in 2011." Nucleic Acids Res 39:D670-D676.21062828
- Schwartz, J. M., Kanehisa, M. (2006). "Quantitative elementary mode analysis of metabolic pathways: the example of yeast glycolysis." BMC Bioinformatics 7:186.16584566
- Vaseghi, S., Baumeister, A., Rizzi, M., Reuss, M. (1999). "In vivo dynamics of the pentose phosphate pathway in Saccharomyces cerevisiae." Metab Eng 1:128-140.10935926
- Gancedo, J. M., Gancedo, C. (1973). "Concentrations of intermediary metabolites in yeast." Biochimie 55:205-211.4578278
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| Synthesis Reference: | Not Available |
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| External Links: | |
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