{"ymdb_id":"YMDB00091","created_at":"2011-05-29T15:55:49.000Z","updated_at":"2016-09-08T18:35:00.000Z","name":"Ammonia","cas":"7664-41-7","state":"Liquid","melting_point":"-77.7 oC","description":"Ammonia is a colorless alkaline gas with a characteristic sharp smell. Ammonia is one of the most abundant nitrogen-containing compounds in the atmosphere.","experimental_water_solubility":"482 mg/mL at 24 oC [DEAN,JA (1985)]","experimental_logp_hydrophobicity":null,"location":"Cytoplasm, Extracellular","synthesis_reference":"Mohr, Rudolf.  Ammonia separation from offgas obtained from melamine synthesis.    U.S.  (1971),     5 pp.  CODEN: USXXAM  US  3555784  19710119  CAN 77:50902  AN 1972:450902","chebi_id":"16134","hmdb_id":"HMDB00051","kegg_id":"C00014","pubchem_id":"222","cs_id":"217","foodb_id":null,"wikipedia_link":"Ammonia","biocyc_id":"AMMONIA","iupac":"ammonia","traditional_iupac":"ammonia","logp":"-0.9779999999999999","pka":null,"alogps_solubility":null,"alogps_logp":null,"alogps_logs":null,"acceptor_count":"1","donor_count":"1","rotatable_bond_count":"0","polar_surface_area":"13.59","refractivity":"15.5149","polarizability":"1.9904529105652708","formal_charge":"0","physiological_charge":"1","pka_strongest_basic":"8.861981369487705","pka_strongest_acidic":null,"bioavailability":"1","number_of_rings":"0","rule_of_five":"1","ghose_filter":"0","veber_rule":"1","mddr_like_rule":"0","synonyms":["Am-fol","Ammonia","Ammonia anhydrous","Ammonia gas","Ammonia solution","Ammonia water","Ammoniac [french]","Ammoniaca [italian]","Ammoniacum gummi","Ammoniak","Ammoniak [german]","Ammoniak kconzentrierter","Ammoniakgas","Ammonium ion","Amoniak [polish]","Anhydrous ammonia","Aromatic ammonia vaporole","Azane","Liquid ammonia","NH3","Nitro-sil","Primaeres amin","Sekundaeres amin","Spirit of hartshorn","Tertiaeres amin"],"pathways":[{"name":"Purine metabolism","kegg_map_id":"00230"},{"name":"Alanine, aspartate and glutamate metabolism","kegg_map_id":"00250"},{"name":"Cyanoamino acid metabolism","kegg_map_id":"00460"},{"name":"Arginine and proline metabolism","kegg_map_id":"00330"},{"name":"Nitrogen metabolism","kegg_map_id":"00910"},{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"},{"name":"One Carbon Pool by Folate I","kegg_map_id":null},{"name":"Porphyrin Metabolism","kegg_map_id":null},{"name":"Selenocompound metabolism","kegg_map_id":"00450"}],"growth_conditions":[],"references":[{"pubmed_id":21051339,"citation":"UniProt Consortium (2011). \"Ongoing and future developments at the Universal Protein Resource.\" Nucleic Acids Res 39:D214-D219."},{"pubmed_id":21062828,"citation":"Scheer, M., Grote, A., Chang, A., Schomburg, I., Munaretto, C., Rother, M., Sohngen, C., Stelzer, M., Thiele, J., Schomburg, D. (2011). \"BRENDA, the enzyme information system in 2011.\" Nucleic Acids Res 39:D670-D676."},{"pubmed_id":10640599,"citation":"ter Schure, E. G., van Riel, N. A., Verrips, C. T. (2000). \"The role of ammonia metabolism in nitrogen catabolite repression in Saccharomyces cerevisiae.\" FEMS Microbiol Rev 24:67-83."},{"pubmed_id":368017,"citation":"Fonzi, W. A., Shanley, M., Opheim, D. J. (1979). \"Relationship of glycolytic intermediates, glycolytic enzymes, and ammonia to glycogen metabolism during sporulation in the yeast Saccharomyces cerevisiae.\" J Bacteriol 137:285-294."},{"pubmed_id":17439666,"citation":"Castrillo, J. I., Zeef, L. A., Hoyle, D. C., Zhang, N., Hayes, A., Gardner, D. C., Cornell, M. J., Petty, J., Hakes, L., Wardleworth, L., Rash, B., Brown, M., Dunn, W. B., Broadhurst, D., O'Donoghue, K., Hester, S. S., Dunkley, T. P., Hart, S. R., Swainston, N., Li, P., Gaskell, S. J., Paton, N. W., Lilley, K. S., Kell, D. B., Oliver, S. G. (2007). \"Growth control of the eukaryote cell: a systems biology study in yeast.\" J Biol 6:4."}],"proteins":[{"created_at":"2011-05-24T19:31:37.000Z","updated_at":"2011-07-22T17:54:32.000Z","name":"CTP synthase 1","uniprot_id":"P28274","uniprot_name":"URA7_YEAST","enzyme":true,"transporter":false,"gene_name":"URA7","num_residues":579,"molecular_weight":"64709.80078","theoretical_pi":"5.91","general_function":"Involved in CTP synthase activity","specific_function":"Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen","reactions":[{"id":1416,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1417,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2258,"direction":"\u003e","locations":"Cytoplasm","altext":"ATP + UTP + NH(3) = ADP + phosphate + CTP.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":"X53995","genbank_protein_id":"440583","gene_card_id":"URA7","chromosome_location":"chromosome 2","locus":"YBL039C","synonyms":["CTP synthetase 1","UTP--ammonia ligase 1"],"enzyme_classes":["6.3.4.2"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" CTP synthase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" ligase activity"},{"category":"Function","description":" ligase activity, forming carbon-nitrogen bonds"},{"category":"Process","description":" pyrimidine nucleotide metabolic process"},{"category":"Process","description":" pyrimidine nucleotide biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" nitrogen compound metabolic process"},{"category":"Process","description":" cellular nitrogen compound metabolic process"},{"category":"Process","description":" nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"},{"category":"Process","description":" nucleobase, nucleoside and nucleotide metabolic process"},{"category":"Process","description":" nucleoside phosphate metabolic process"},{"category":"Process","description":" nucleotide metabolic process"}],"pfams":[{"name":"GATase","identifier":"PF00117"},{"name":"CTP_synth_N","identifier":"PF06418"}],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"}],"gene_sequence":"ATGAAGTACGTTGTTGTTTCAGGTGGTGTCATTTCGGGTATCGGTAAAGGTGTTCTTGCATCTTCAACTGGTATGCTAATGAAAACCCTCGGTTTAAAGGTTACGTCAATTAAAATTGACCCTTATATGAACATTGATGCAGGTACTATGTCTCCTTTGGAACATGGTGAATGTTTCGTGCTTGACGACGGTGGTGAAACAGATTTGGACTTGGGTAACTACGAGAGATACCTTGGAGTTACTTTGACTAAAGATCATAACATTACTACTGGTAAAATATACTCGCACGTTATTGCTAAGGAAAGAAAAGGTGACTATTTAGGCAAAACCGTGCAAATTGTCCCTCATTTGACCAACGCTATCCAAGATTGGATTGAGCGCGTGGCCAAAATTCCTGTAGATGACACCGGTATGGAACCAGATGTTTGTATCATTGAATTGGGTGGGACAGTTGGTGACATTGAAAGTGCTCCTTTTGTGGAGGCACTAAGACAATTCCAATTTAAAGTTGGAAAGGAAAATTTTGCCTTGATACACGTTTCTCTAGTTCCTGTCATCCACGGTGAACAAAAAACTAAGCCAACTCAAGCTGCCATCAAAGGTTTGAGGTCTCTTGGTTTAGTTCCAGATATGATCGCCTGTAGATGTAGTGAAACTTTGGATAAACCAACAATCGATAAGATTGCCATGTTTTGTCATGTGGGGCCTGAACAGGTGGTTAACGTTCACGATGTTAATTCTACTTATCACGTCCCATTGTTGCTACTGGAACAAAAGATGATTGATTACTTACACGCCAGATTAAAGTTAGATGAAATATCACTTACAGAAGAAGAAAAACAAAGAGGCCTGGAATTATTGTCTAAATGGAAGGCCACAACAGGTAACTTCGATGAATCCATGGAAACAGTGAAGATTCGTTTGGTTGGGAAATACACCAACTTGAAAGATTCTTATCTATCAGTGATAAAAGCATTGGAACATTCATCCATGAAGTGTCGTCGTAAGTTAGACATTAAATGGGTGGAAGCTACTGATTTGGAACCTGAAGCACAAGAAAGCAACAAAACTAAATTTCATGAAGCATGGAACATGGTCAGTACCGCAGACGGTATCTTAATCCCCGGTGGTTTTGGTGTTAGAGGTACTGAAGGTATGGTTTTGGCTGCTAGATGGGCTCGTGAAAATCACATTCCATTCTTAGGGGTTTGCCTGGGTTTACAAATTGCCACCATTGAATTTACACGTAGTTCGTTGGGAAGAAAAGACAGTCATTCGGCAGAATTTTATCCAGACATTGATGAAAAAAATCACGTTGTCGTTTTCATGCCTGAAATTGACAAGGAAACCATGGGGGGCTCAATGAGATTAGGTTTGAGACCAACATTTTTCCAAAATGAAACTGAATGGAGTCAAATCAAGAAGTTATACGGTGACGTCTCCGAAGTCCATGAAAGACACCGTCACCGTTACGAAATCAATCCAAAGATGGTTGATGAATTGGAAAACAACGGGTTGATCTTTGTAGGTAAGGACGACACTGGAAAGCGTTGTGAGATTTTGGAATTAAAGAATCACCCATACTATATTGCTACTCAATATCACCCAGAATACACATCAAAGGTCTTAGATCCATCCAAACCATTTTTGGGTTTAGTTGCTGCTTCCGCTGGTATCCTTCAAGATGTCATTGAAGGTAAGTACGATCTTGAGGCCGGCGAAAACAAATTCAACTTTTAA","protein_sequence":"MKYVVVSGGVISGIGKGVLASSTGMLMKTLGLKVTSIKIDPYMNIDAGTMSPLEHGECFVLDDGGETDLDLGNYERYLGVTLTKDHNITTGKIYSHVIAKERKGDYLGKTVQIVPHLTNAIQDWIERVAKIPVDDTGMEPDVCIIELGGTVGDIESAPFVEALRQFQFKVGKENFALIHVSLVPVIHGEQKTKPTQAAIKGLRSLGLVPDMIACRCSETLDKPTIDKIAMFCHVGPEQVVNVHDVNSTYHVPLLLLEQKMIDYLHARLKLDEISLTEEEKQRGLELLSKWKATTGNFDESMETVKIALVGKYTNLKDSYLSVIKALEHSSMKCRRKLDIKWVEATDLEPEAQESNKTKFHEAWNMVSTADGILIPGGFGVRGTEGMVLAARWARENHIPFLGVCLGLQIATIEFTRSVLGRKDSHSAEFYPDIDEKNHVVVFMPEIDKETMGGSMRLGLRPTFFQNETEWSQIKKLYGDVSEVHERHRHRYEINPKMVDELENNGLIFVGKDDTGKRCEILELKNHPYYIATQYHPEYTSKVLDPSKPFLGLVAASAGILQDVIEGKYDLEAGENKFNF"},{"created_at":"2011-05-24T19:32:21.000Z","updated_at":"2011-05-27T14:55:58.000Z","name":"Glutamine synthetase","uniprot_id":"P32288","uniprot_name":"GLNA_YEAST","enzyme":true,"transporter":false,"gene_name":"GLN1","num_residues":370,"molecular_weight":"41705.60156","theoretical_pi":"6.29","general_function":"Involved in glutamate-ammonia ligase activity","specific_function":"ATP + L-glutamate + NH(3) = ADP + phosphate + L-glutamine","reactions":[{"id":1579,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2259,"direction":"\u003e","locations":"Cytoplasm","altext":"ATP + L-glutamate + NH(3) = ADP + phosphate + L-glutamine.","export":false,"pw_reaction_id":null,"source":null},{"id":14887,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R007078","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm","genbank_gene_id":"Z68111","genbank_protein_id":"1072403","gene_card_id":"GLN1","chromosome_location":"chromosome 16","locus":"YPR035W","synonyms":["GS","Glutamate--ammonia ligase"],"enzyme_classes":["6.3.1.2"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" acid-ammonia (or amide) ligase activity"},{"category":"Function","description":" ammonia ligase activity"},{"category":"Function","description":" glutamate-ammonia ligase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" ligase activity"},{"category":"Function","description":" ligase activity, forming carbon-nitrogen bonds"},{"category":"Process","description":" glutamine biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" nitrogen compound metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"},{"category":"Process","description":" glutamine family amino acid metabolic process"},{"category":"Process","description":" glutamine metabolic process"}],"pfams":[{"name":"Gln-synt_C","identifier":"PF00120"},{"name":"Gln-synt_N","identifier":"PF03951"}],"pathways":[{"name":"Alanine, aspartate and glutamate metabolism","kegg_map_id":"00250"},{"name":"Arginine and proline metabolism","kegg_map_id":"00330"},{"name":"Nitrogen metabolism","kegg_map_id":"00910"}],"gene_sequence":"ATGGCTGAAGCAAGCATCGAAAAGACTCAAATTTTACAAAAATATCTAGAACTGGACCAAAGAGGTAGAATAATTGCCGAATACGTTTGGATCGATGGTACTGGTAACTTACGTTCCAAAGGTAGAACTTTGAAGAAGAGAATCACATCCATTGACCAATTGCCAGAATGGAACTTCGACGGTTCTTCTACCAACCAAGCGCCAGGCCACGACTCTGACATCTATTTGAAACCCGTTGCTTACTACCCAGATCCCTTCAGGAGAGGTGACAACATTGTTGTCTTGGCCGCATGTTACAACAATGACGGTACTCCAAACAAGTTCAACCACAGACACGAAGCTGCCAAGCTATTTGCTGCTCATAAGGATGAAGAAATCTGGTTTGGTCTAGAACAAGAATACACTCTATTTGACATGTATGACGATGTTTACGGATGGCCAAAGGGTGGGTACCCAGCTCCACAAGGTCCTTACTACTGTGGTGTTGGTGCCGGTAAGGTTTATGCCAGAGACATGATCGAAGCTCACTACAGAGCTTGTTTGTATGCCGGATTAGAAATTTCTGGTATTAACGCTGAAGTCATGCCATCTCAATGGGAATTCCAAGTCGGTCCATGTACCGGTATTGACATGGGTGACCAATTATGGATGGCCAGATACTTTTTGCACAGAGTGGCAGAAGAGTTTGGTATCAAGATCTCATTCCATCCAAAGCCATTGAAGGGTGACTGGAACGGTGCCGGTTGTCACGCTAACGTTTCCACCAAGGAAATGAGACAACCAGGTGGTACGAAATACATCGAACAAGCCATCGAGAAGTTATCCAAGAGACACGCTGAACACATTAAGTTGTACGGTAGCGATAACGACATGAGATTAACTGGTAGACATGAAACCGCTTCCATGACTGCCTTTTCTTCTGGTGTCGCCAACAGAGGTAGCTCAATTAGAATCCCAAGATCCGTCGCCAAGGAAGGTTACGGTTACTTTGAAGACCGTAGACCAGCTTCCAACATCGACCCATACTTGGTTACAGGTATCATGTGTGAAACTGTTTGCGGTGCTATTGACAATGCTGACATGACGAAGGAATTTGAAAGAGAATCTTCATAA","protein_sequence":"MAEASIEKTQILQKYLELDQRGRIIAEYVWIDGTGNLRSKGRTLKKRITSIDQLPEWNFDGSSTNQAPGHDSDIYLKPVAYYPDPFRRGDNIVVLAACYNNDGTPNKFNHRHEAAKLFAAHKDEEIWFGLEQEYTLFDMYDDVYGWPKGGYPAPQGPYYCGVGAGKVYARDMIEAHYRACLYAGLEISGINAEVMPSQWEFQVGPCTGIDMGDQLWMARYFLHRVAEEFGIKISFHPKPLKGDWNGAGCHANVSTKEMRQPGGTKYIEQAIEKLSKRHAEHIKLYGSDNDMRLTGRHETASMTAFSSGVANRGSSIRIPRSVAKEGYGYFEDRRPASNIDPYLVTGIMCETVCGAIDNADMTKEFERESS"},{"created_at":"2011-05-24T19:40:55.000Z","updated_at":"2011-07-22T17:54:32.000Z","name":"CTP synthase 2","uniprot_id":"P38627","uniprot_name":"URA8_YEAST","enzyme":true,"transporter":false,"gene_name":"URA8","num_residues":564,"molecular_weight":"63055.69922","theoretical_pi":"6.0","general_function":"Involved in CTP synthase activity","specific_function":"Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Plays an important role in the regulation of phospholipid synthesis","reactions":[{"id":1416,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1417,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2258,"direction":"\u003e","locations":"Cytoplasm","altext":"ATP + UTP + NH(3) = ADP + phosphate + CTP.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm","genbank_gene_id":"Z49603","genbank_protein_id":"1015810","gene_card_id":"URA8","chromosome_location":"chromosome 10","locus":"YJR103W","synonyms":["CTP synthetase 2","UTP--ammonia ligase 2"],"enzyme_classes":["6.3.4.2"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" CTP synthase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" ligase activity"},{"category":"Function","description":" ligase activity, forming carbon-nitrogen bonds"},{"category":"Process","description":" pyrimidine nucleotide metabolic process"},{"category":"Process","description":" pyrimidine nucleotide biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" nitrogen compound metabolic process"},{"category":"Process","description":" cellular nitrogen compound metabolic process"},{"category":"Process","description":" nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"},{"category":"Process","description":" nucleobase, nucleoside and nucleotide metabolic process"},{"category":"Process","description":" nucleoside phosphate metabolic process"},{"category":"Process","description":" nucleotide metabolic process"}],"pfams":[{"name":"GATase","identifier":"PF00117"},{"name":"CTP_synth_N","identifier":"PF06418"}],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"}],"gene_sequence":"ATGAAATACGTTGTTGTTTCTGGTGGTGTTATCTCAGGTATTGGTAAGGGTGTTTTAGCGTCCTCTACAGGGATGCTACTGAAAACCCTCGGCCTAAAGGTTACTTCCATCAAGATTGACCCATATATGAATATTGACGCCGGGACGATGTCTCCCTTGGAACATGGTGAGTGTTTTGTACTTGATGATGGTGGGGAAACGGACTTGGATCTCGGTAATTACGAGCGGTACCTCGGTATTACCTTAAGCAGGGACCACAACATCACCACCGGTAAGATATACTCCCACGTAATTTCCAGAGAAAGGAGAGGTGATTATTTAGGTAAGACAGTTCAAATTGTTCCTCATTTGACTAACGCAATTCAGGATTGGATTCAACGTGTTTCAAAAATTCCAGTGGATGACACAGGATTAGAACCAGACGTCTGTATCATCGAGTTAGGTGGTACGGTCGGTGACATTGAGAGTGCGCCCTTCGTGGAAGCATTACGACAATTTCAGTTCGAAGTTGGAAGAGAGAATTTCGCCCTGATCCATGTTTCACTTGTGCCCGTCATTCATGGTGAACAGAAGACGAAACCCACCCAAGCAGCAATCAAAGATTTAAGGTCATTAGGGCTTATTCCCGATATGATTGCCTGCAGATGCAGCGAAGAACTTAACAGGAGCACTATTGACAAGATTGCCATGTTTTGCCATGTGGGGCCGGAGCAAGTGGTCAACGTTCATGATGTTAACTCCACGTACCACGTTCCCTTATTGCTGCTAAAGCAACATATGATCGACTACCTCCATTCAAGGTTGAAATTAGGTGAAGTGCCTCTAACCTTGGAAGACAAGGAAAGAGGGTCTCAATTATTGACTAACTGGGAAAACATGACCAAAAACCTAGATGATTCTGATGATGTTGTCAAGATTGCTCTTGTGGGAAAATACACTAATTTGAAGGATTCCTACCTATCTGTGACCAAATCCTTAGAACACGCAAGCATGAAGTGCCGTCGTCAGCTAGAAATCCTCTGGGTAGAGGCAAGTAACCTAGAGCCCGAAACTCAAGAGGTGGACAAGAACAAGTTCCACGATTCATGGAATAAGCTCAGTTCCGCCGACGGAATTTTGGTTCCTGGTGGATTTGGCACGAGAGGTATTGAAGGTATGATTCTTGCTGCCAAATGGGCCCGTGAATCCGGTGTTCCCTTTCTTGGTGTCTGTCTTGGATTACAAGTTGCCGCTATCGAGTTCGCCCGCAATGTGATAGGCCGCCCAAACAGCAGTTCTACAGAATTTTTGGACGAGACACTACTAGCTCCTGAAGACCAAGTAGTCATATACATGCCCGAGATCGACAAGGAACACATGGGTGGCACGATGAGATTGGGTTTGAGGCCTACCATTTTCCAACCGAACTCAGAATGGAGCAACATAAGGAAGCTTTATGGTGAAGTTAATGAGGTGCATGAGAGACATCGTCATCGCTATGAGATAAACCCGAAAATAGTGAATGATATGGAGTCTCGTGGCTTTATTTTTGTTGGTAAGGACGAGACGGGCCAGCGTTGCGAAATATTCGAATTGAAAGGCCATCCATACTACGTGGGCACTCAATACCATCCAGAGTATACATCGAAGGTGCTGGAACCATCAAGACCGTTTTGGGGGCTTGTGGCCGCAGCTCCGGCACACTTGGTGAAGTGA","protein_sequence":"MKYVVVSGGVISGIGKGVLASSTGMLLKTLGLKVTSIKIDPYMNIDAGTMSPLEHGECFVLDDGGETDLDLGNYERYLGITLSRDHNITTGKIYSHVISRERRGDYLGKTVQIVPHLTNAIQDWIQRVSKIPVDDTGLEPDVCIIELGGTVGDIESAPFVEALRQFQFEVGRENFALIHVSLVPVIHGEQKTKPTQAAIKDLRSLGLIPDMIACRCSEELNRSTIDKIAMFCHVGPEQVVNVHDVNSTYHVPLLLLKQHMIDYLHSRLKLGEVPLTLEDKERGSQLLTNWENMTKNLDDSDDVVKIALVGKYTNLKDSYLSVTKSLEHASMKCRRQLEILWVEASNLEPETQEVDKNKFHDSWNKLSSADGILVPGGFGTRGIEGMILAAKWARESGVPFLGVCLGLQVAAIEFARNVIGRPNSSSTEFLDETLLAPEDQVVIYMPEIDKEHMGGTMRLGLRPTIFQPNSEWSNIRKLYGEVNEVHERHRHRYEINPKIVNDMESRGFIFVGKDETGQRCEIFELKGHPYYVGTQYHPEYTSKVLEPSRPFWGLVAAAPAHLVK"},{"created_at":"2011-05-24T19:43:43.000Z","updated_at":"2011-07-22T17:54:09.000Z","name":"Urea amidolyase","uniprot_id":"P32528","uniprot_name":"DUR1_YEAST","enzyme":true,"transporter":false,"gene_name":"DUR1","num_residues":1835,"molecular_weight":"201830.0","theoretical_pi":"5.3","general_function":"Involved in carbon-nitrogen ligase activity, with glutamine as amido-N-donor","specific_function":"Hydrolysis of urea to ammonia and CO(2)","reactions":[{"id":1312,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2035,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2266,"direction":"\u003e","locations":null,"altext":"ATP + urea + HCO(3)(-) = ADP + phosphate + urea-1-carboxylate.","export":false,"pw_reaction_id":null,"source":null},{"id":2267,"direction":"\u003e","locations":null,"altext":"Urea-1-carboxylate + H(2)O = 2 CO(2) + 2 NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":"M64926","genbank_protein_id":"173122","gene_card_id":"DUR1","chromosome_location":null,"locus":"YBR208C","synonyms":["Urea carboxylase","Allophanate hydrolase"],"enzyme_classes":["6.3.4.6","3.5.1.54"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" ATP binding"},{"category":"Function","description":" vitamin binding"},{"category":"Function","description":" biotin binding"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" ligase activity"},{"category":"Function","description":" ligase activity, forming carbon-nitrogen bonds"},{"category":"Function","description":" carbon-nitrogen ligase activity, with glutamine as amido-N-donor"},{"category":"Function","description":" binding"},{"category":"Function","description":" nucleoside binding"},{"category":"Function","description":" purine nucleoside binding"},{"category":"Function","description":" adenyl nucleotide binding"},{"category":"Function","description":" adenyl ribonucleotide binding"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"CPSase_L_chain","identifier":"PF00289"},{"name":"CPSase_L_D2","identifier":"PF02786"},{"name":"Amidase","identifier":"PF01425"},{"name":"AHS1","identifier":"PF02682"},{"name":"AHS2","identifier":"PF02626"},{"name":"Biotin_carb_C","identifier":"PF02785"},{"name":"Biotin_lipoyl","identifier":"PF00364"}],"pathways":[{"name":"Arginine and proline 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ATTTGGGACAAACTATGTCTGGCCGCATCTTCTGAGGTTCCGTGGTTGATGAACCCATTTGACCAAGTCGAATTTTACCCAGTTTCTGAAGAAGATTTGGATAAAATGACTGAAGATTGTGATAATGGTGTTTATAAAGTCAATATCGAAAAGAGTGTTTTTGATCATCAAGAATACTTGAGATGGATCAACGCAAACAAAGATTCCATCACAGCATTCCAGGAGGGCCAGCTTGGTGAAAGAGCAGAGGAATTTGCCAAATTGATTCAAAATGCAAACTCTGAACTAAAAGAAAGTGTCACAGTCAAACCTGACGAGGAAGAAGACTTCCCAGAAGGTGCAGAAATTGTATATTCTGAGTATTCTGGGCGTTTTTGGAAATCCATAGCATCTGTTGGAGATGTTATTGAAGCAGGTCAAGGGCTACTAATTATTGAAGCCATGAAAGCGGAAATGATTATATCCGCTCCTAAATCGGGTAAGATTATCAAGATTTGCCATGGCAATGGTGATATGGTTGATTCTGGTGACATAGTGGCCGTCATAGAGACATTGGCATGA","protein_sequence":"MTVSSDTTAEISLGWSIQDWIDFHKSSSSQASLRLLESLLDSQNVAPVDNAWISLISKENLLHQFQILKSRENKETLPLYGVPIAVKDNIDVRGLPTTAACPSFAYEPSKDSKVVELLRNAGAIIVGKTNLDQFATGLVGTRSPYGKTPCAFSKEHVSGGSSAGSASVVARGIVPIALGTDTAGSGRVPAALNNLIGLKPTKGVFSCQGVVPACKSLDCVSIFALNLSDAERCFRIMCQPDPDNDEYSRPYVSNPLKKFSSNVTIAIPKNIPWYGETKNPVLFSNAVENLSRTGANVIEIDFEPLLELARCLYEGTWVAERYQAIQSFLDSKPPKESLDPTVISIIEGAKKYSAVDCFSFEYKRQGILQKVRRLLESVDVLCVPTCPLNPTMQQVADEPVLVNSRQGTWTNFVNLADLAALAVPAGFRDDGLPNGITLIGKKFTDYALLELANRYFQNIFPNGSRTYGTFTSSSVKPANDQLVGPDYDPSTSIKLAVVGAHLKGLPLHWQLEKVNATYLCTTKTSKAYQLFALPKNGPVLKPGLRRVQDSNGSQIELEVYSVPKELFGAFISMVPEPLGIGSVELESGEWIKSFICEESGYKAKGTVDITKYGGFRAYFEMLKKKESQKKKLFDTVLIANRGEIAVRIIKTLKKLGIRSVAVYSDPDKYSQHVTDADVSVPLHGTTAAQTYLDMNKIIDAAKQTNAQAIIPGYGFLSENADFSDACTSAGITFVGPSGDIIRGLGLKHSARQIAQKAGVPLVPGSLLITSVEEAKKVAAELEYPVMVKSTAGGGGIGLQKVDSEEDIEHIFETVKHQGETFFGDAGVFLERFIENARHVEVQLMGDGFGKAIALGERDCSLQRRNQKVIEETPAPNLPEKTRLALRKAAESLGSLLNYKCAGTVEFIYDEKKDEFYFLEVNTRLQVEHPITEMVTGLDLVEWMIRIAANDAPDFDSTKVEVNGVSMEARLYAENPLKNFRPSPGLLVDVKFPDWARVDTWVKKGTNISPEYDPTLAKIIVHGKDRDDAISKLNQALEETKVYGCITNIDYLKSIITSDFFAKAKVSTNILNSYQYEPTAIEITLPGAHTSIQDYPGRVGYWRIGVPPSGPMDAYSFRLANRIVGNDYRTPAIEVTLTGPSIVFHCETVIAITGGTALCTLDGQEIPQHKPVEVKRGSTLSIGKLTSGCRAYLGIRGGIDVPKYLGSYSTFTLGNVGGYNGRVLKLGDVLFLPSNEENKSVECLPQNIPQSLIPQISETKEWRIGVTCGPHGSPDFFKPESIEEFFSEKWKVHYNSNRFGVRLIGPKPKWARSNGGEGGMHPSNTHDYVYSLGAINFTGDEPVIITCDGPSLGGFVCQAVVPEAELWKVGQVKPGDSIQFVPLSYESSRSLKESQDVAIKSLDGTKLRRLDSVSILPSFETPILAQMEKVNELSPKVVYRQAGDRYVLVEYGDNEMNFNISYRIECLISLVKKNKTIGIVEMSQGVRSVLIEFDGYKVTQKELLKVLVAYETEIQFDENWKITSNIIRLPMAFEDSKTLACVQRYQETIRSSAPWLPNNVDFIANVNGISRNEVYDMLYSARFMVLGLGDVFLGSPCAVPLDPRHRFLGSKYNPSRTYTERGAVGIGGMYMCIYAANSPGGYQLVGRTIPIWDKLCLAASSEVPWLMNPFDQVEFYPVSEEDLDKMTEDCDNGVYKVNIEKSVFDHQEYLRWINANKDSITAFQEGQLGERAEEFAKLIQNANSELKESVTVKPDEEEDFPEGAEIVYSEYSGRFWKSIASVGDVIEAGQGLLIIEAMKAEMIISAPKSGKIIKICHGNGDMVDSGDIVAVIETLA"},{"created_at":"2011-05-24T20:50:12.000Z","updated_at":"2011-05-27T14:56:01.000Z","name":"Ureidoglycolate hydrolase","uniprot_id":"P32459","uniprot_name":"ALLA_YEAST","enzyme":true,"transporter":false,"gene_name":"DAL3","num_residues":195,"molecular_weight":"21726.59961","theoretical_pi":"5.06","general_function":"Involved in ureidoglycolate hydrolase activity","specific_function":"Utilization of purines as secondary nitrogen sources, when primary sources are limiting","reactions":[{"id":2036,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2350,"direction":"\u003e","locations":"Cell membrane; Lipid-anchor; Cytoplasmic side (Potential)","altext":"(S)-ureidoglycolate + H(2)O = glyoxylate + 2 NH(3) + CO(2).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cell membrane; Lipid-anchor; Cytoplasmic side (Potential)","genbank_gene_id":"M64778","genbank_protein_id":"171370","gene_card_id":"DAL3","chromosome_location":"chromosome 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oxidase","uniprot_id":"P38075","uniprot_name":"PDX3_YEAST","enzyme":true,"transporter":false,"gene_name":"PDX3","num_residues":228,"molecular_weight":"26908.0","theoretical_pi":"7.67","general_function":"Involved in pyridoxamine-phosphate oxidase activity","specific_function":"Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP)","reactions":[{"id":1923,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1924,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1926,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1928,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2356,"direction":"\u003e","locations":null,"altext":"Pyridoxamine 5'-phosphate + H(2)O + O(2) = pyridoxal 5'-phosphate + NH(3) + H(2)O(2).","export":false,"pw_reaction_id":null,"source":null},{"id":2357,"direction":"\u003e","locations":null,"altext":"Pyridoxine 5'-phosphate + O(2) = pyridoxal 5'-phosphate + H(2)O(2).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1CI0","cellular_location":null,"genbank_gene_id":"AY557712","genbank_protein_id":"45269315","gene_card_id":"PDX3","chromosome_location":"chromosome 2","locus":"YBR035C","synonyms":["PNP/PMP oxidase","PNPOx"],"enzyme_classes":["1.4.3.5"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" pyridoxamine-phosphate oxidase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" nucleotide binding"},{"category":"Function","description":" FMN binding"},{"category":"Function","description":" oxidoreductase activity, acting on the CH-NH2 group of donors"},{"category":"Function","description":" oxidoreductase activity"},{"category":"Function","description":" oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor"},{"category":"Process","description":" vitamin metabolic process"},{"category":"Process","description":" water-soluble vitamin metabolic process"},{"category":"Process","description":" vitamin B6 metabolic process"},{"category":"Process","description":" pyridoxine metabolic process"},{"category":"Process","description":" pyridoxine biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" oxidation reduction"},{"category":"Process","description":" small molecule metabolic process"}],"pfams":[{"name":"PNPOx_C","identifier":"PF10590"},{"name":"Pyridox_oxidase","identifier":"PF01243"}],"pathways":[{"name":"Vitamin B6 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gamma-lyase","uniprot_id":"P31373","uniprot_name":"CYS3_YEAST","enzyme":true,"transporter":false,"gene_name":"CYS3","num_residues":394,"molecular_weight":"42541.69922","theoretical_pi":"6.52","general_function":"Involved in pyridoxal phosphate binding","specific_function":"L-cystathionine + H(2)O = L-cysteine + NH(3) + 2-oxobutanoate","reactions":[{"id":1420,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2423,"direction":"\u003e","locations":"Cytoplasm","altext":"L-cystathionine + H(2)O = L-cysteine + NH(3) + 2-oxobutanoate.","export":false,"pw_reaction_id":null,"source":null},{"id":3779,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006300","source":"Smpdb"},{"id":3780,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006305","source":"Smpdb"},{"id":14294,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006775","source":"Smpdb"},{"id":14295,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006796","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1N8P","cellular_location":"Cytoplasm","genbank_gene_id":"D14135","genbank_protein_id":"416164","gene_card_id":"CYS3","chromosome_location":"chromosome 1","locus":"YAL012W","synonyms":["Gamma-cystathionase","Sulfur transfer protein 1"],"enzyme_classes":["4.4.1.1"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" cofactor binding"},{"category":"Function","description":" pyridoxal phosphate binding"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"}],"pfams":[{"name":"Cys_Met_Meta_PP","identifier":"PF01053"}],"pathways":[{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"},{"name":"Cysteine and methionine metabolism","kegg_map_id":"00270"},{"name":"Selenocompound metabolism","kegg_map_id":"00450"},{"name":"Nitrogen metabolism","kegg_map_id":"00910"},{"name":"Cysteine Metabolism","kegg_map_id":null},{"name":"Sulfur metabolism","kegg_map_id":"00920"}],"gene_sequence":"ATGACTCTACAAGAATCTGATAAATTTGCTACCAAGGCCATTCATGCCGGTGAACATGTGGACGTTCACGGTTCCGTGATCGAACCCATTTCTTTGTCCACCACTTTCAAACAATCTTCTCCAGCTAACCCTATCGGTACTTACGAATACTCCAGATCTCAAAATCCTAACAGAGAGAACTTGGAAAGAGCAGTTGCCGCTTTAGAGAACGCTCAATACGGGTTGGCTTTCTCCTCTGGTTCTGCCACCACCGCCACAATCTTGCAATCGCTTCCTCAGGGCTCCCATGCGGTCTCTATCGGTGATGTGTACGGTGGTACCCACAGATACTTCACCAAAGTCGCCAACGCTCACGGTGTGGAAACCTCCTTCACTAACGATTTGTTGAACGATCTACCTCAATTGATAAAGGAAAACACCAAATTGGTCTGGATCGAAACCCCAACCAACCCAACTTTGAAGGTCACCGACATCCAAAAGGTGGCAGACCTTATCAAGAAGCACGCTGCCGGCCAAGACGTGATCTTGGTTGTCGACAACACCTTCTTGTCCCCATATATCTCCAATCCATTGAACTTCGGTGCAGACATCGTTGTCCACTCCGCTACAAAGTACATCAACGGTCACTCAGACGTTGTGCTCGGTGTCCTGGCCACTAATAACAAGCCATTGTACGAGCGTCTGCAGTTCTTACAAAACGCCATTGGTGCTATCCCATCTCCTTTCGATGCTTGGTTGACCCACAGAGGTTTGAAGACTTTGCATCTACGTGTCAGACAAGCTGCCCTCAGCGCCAACAAAATCGCTGAATTCTTGGCAGCAGACAAGGAAAACGTTGTCGCAGTCAACTACCCAGGTTTGAAGACACACCCTAACTACGACGTAGTGTTAAAGCAACACCGTGATGCCCTTGGTGGTGGTATGATCTCCTTCAGAATCAAGGGTGGTGCTGAAGCTGCTTCCAAGTTCGCCTCCTCCACAAGACTGTTCACATTGGCCGAATCCCTTGGTGGTATCGAATCTCTATTGGAAGTGCCCGCTGTGATGACCCACGGTGGTATCCCAAAGGAGGCCAGAGAGGCCTCTGGTGTTTTTGACGACTTGGTTAGAATCTCTGTCGGTATTGAAGACACTGACGATCTTTTGGAAGACATCAAGCAAGCCTTGAAACAAGCCACCAACTAA","protein_sequence":"MTLQESDKFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGSATTATILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLLNDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQATN"},{"created_at":"2011-05-26T16:42:13.000Z","updated_at":"2011-07-22T17:54:35.000Z","name":"Cytidine deaminase","uniprot_id":"Q06549","uniprot_name":"CDD_YEAST","enzyme":true,"transporter":false,"gene_name":"CDD1","num_residues":142,"molecular_weight":"15535.90039","theoretical_pi":"7.22","general_function":"Involved in zinc ion binding","specific_function":"This enzyme scavenge exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis","reactions":[{"id":1424,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1442,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2439,"direction":"\u003e","locations":"Cytoplasmic","altext":"Cytidine + H(2)O = uridine + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1R5T","cellular_location":"Cytoplasmic","genbank_gene_id":"AF080089","genbank_protein_id":"4140396","gene_card_id":"CDD1","chromosome_location":"chromosome 12","locus":"YLR245C","synonyms":["CDA","Cytidine aminohydrolase"],"enzyme_classes":["3.5.4.5"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" transition metal ion binding"},{"category":"Function","description":" zinc ion binding"},{"category":"Function","description":" hydrolase activity"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines"},{"category":"Function","description":" cytidine deaminase activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" ion binding"},{"category":"Function","description":" cation binding"},{"category":"Function","description":" metal ion binding"},{"category":"Process","description":" nucleoside metabolic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" nitrogen compound metabolic process"},{"category":"Process","description":" pyrimidine nucleoside metabolic process"},{"category":"Process","description":" cellular nitrogen compound metabolic process"},{"category":"Process","description":" pyrimidine ribonucleoside metabolic process"},{"category":"Process","description":" nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"},{"category":"Process","description":" cytidine metabolic process"},{"category":"Process","description":" nucleobase, nucleoside and nucleotide metabolic process"}],"pfams":[{"name":"dCMP_cyt_deam_1","identifier":"PF00383"}],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"}],"gene_sequence":"ATGAAAGTAGGTGGCATAGAAGACAGACAACTGGAAGCCTTAAAAAGGGCGGCACTGAAGGCGTGTGAACTCTCCTATAGCCCCTATTCTCACTTCCGTGTCGGTTGTTCCATATTAACAAATAACGATGTTATCTTCACTGGTGCTAATGTCGAGAATGCAAGCTACAGTAATTGTATATGTGCAGAACGATCTGCTATGATACAAGTTCTAATGGCAGGCCATCGCTCAGGATGGAAATGCATGGTCATTTGTGGCGATTCTGAGGACCAGTGTGTTTCCCCTTGCGGCGTTTGCAGGCAGTTTATCAATGAATTTGTGGTCAAGGACTTTCCAATAGTCATGCTTAATTCCACAGGTTCTCGTTCTAAAGTCATGACAATGGGAGAACTGCTGCCCATGGCTTTTGGTCCATCTCATTTAAACTAG","protein_sequence":"MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAFGPSHLN"},{"created_at":"2011-05-26T16:49:15.000Z","updated_at":"2011-07-22T17:54:35.000Z","name":"Adenosine deaminase","uniprot_id":"P53909","uniprot_name":"ADA_YEAST","enzyme":true,"transporter":false,"gene_name":"AAH1","num_residues":347,"molecular_weight":"39634.69922","theoretical_pi":"5.07","general_function":"Involved in deaminase activity","specific_function":"Adenosine + H(2)O = inosine + NH(3)","reactions":[{"id":1266,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1268,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1440,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2446,"direction":"\u003e","locations":"Cytoplasm. Nucleus","altext":"Adenosine + H(2)O = inosine + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm. Nucleus","genbank_gene_id":"Z46843","genbank_protein_id":"854497","gene_card_id":"AAH1","chromosome_location":"chromosome 14","locus":"YNL141W","synonyms":["Adenosine aminohydrolase"],"enzyme_classes":["3.5.4.4","3.5.4.2"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" hydrolase activity"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" adenosine deaminase activity"},{"category":"Function","description":" deaminase activity"},{"category":"Process","description":" purine ribonucleoside monophosphate biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" nitrogen compound metabolic process"},{"category":"Process","description":" cellular nitrogen compound metabolic process"},{"category":"Process","description":" nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"},{"category":"Process","description":" nucleobase, nucleoside and nucleotide metabolic process"},{"category":"Process","description":" nucleoside phosphate metabolic process"},{"category":"Process","description":" nucleotide metabolic process"},{"category":"Process","description":" purine nucleotide metabolic process"},{"category":"Process","description":" purine nucleotide biosynthetic process"},{"category":"Process","description":" purine nucleoside monophosphate biosynthetic process"}],"pfams":[{"name":"A_deaminase","identifier":"PF00962"}],"pathways":[{"name":"Purine metabolism","kegg_map_id":"00230"}],"gene_sequence":"ATGGTTTCTGTGGAGTTTTTACAGGAGTTACCAAAATGTGAGCATCACTTGCATTTGGAAGGTACTCTAGAACCTGACCTATTGTTCCCATTAGCTAAAAGAAACGATATAATTCTACCTGAAGGTTTTCCTAAATCGGTCGAGGAATTAAACGAAAAGTATAAGAAGTTTCGTGATCTGCAGGATTTCTTAGATTACTATTATATTGGTACTAATGTCTTGATTAGTGAACAAGATTTCTTTGATTTGGCGTGGGCCTATTTTAAAAAAGTTCACAAACAAGGCTTGGTCCATGCTGAAGTGTTTTACGACCCTCAGTCACATACATCTAGGGGCATCTCCATAGAAACAGTCACTAAAGGTTTCCAAAGAGCTTGTGACAAAGCCTTCTCTGAATTTGGTATTACATCCAAGCTAATTATGTGTCTGTTAAGACACATTGAACCAGAGGAATGTTTGAAAACTATCGAAGAAGCTACCCCATTTATTAAAGATGGTACTATCTCTGCCTTAGGATTAGATTCTGCTGAGAAACCATTTCCCCCACATTTATTTGTTGAATGTTACGGAAAGGCCGCCTCATTGAATAAAGATTTAAAACTAACTGCACACGCAGGTGAAGAAGGCCCCGCTCAATTCGTCTCGGATGCTTTAGACTTGTTGCAAGTAACAAGAATCGATCACGGTATCAACAGTCAATACGACGAGGAGTTATTGGATAGGTTGTCGCGCGACCAGACCATGCTAACTATTTGTCCTCTCTCCAACGTGAAGCTACAAGTAGTCCAATCCGTTTCAGAGTTACCACTACAAAAGTTTCTTGACAGAGATGTTCCATTTTCTTTAAATTCTGATGACCCCGCCTATTTTGGTGGTTATATCTTAGATGTCTACACTCAAGTTTCGAAAGATTTCCCACACTGGGACCATGAAACATGGGGTCGTATCGCTAAGAACGCCATTAAAGGTTCATGGTGTGACGATAAAAGAAAGAACGGTTTGTTAAGTAGAGTGGACGAAGTAGTCACTAAATATTCGCATTAG","protein_sequence":"MVSVEFLQELPKCEHHLHLEGTLEPDLLFPLAKRNDIILPEGFPKSVEELNEKYKKFRDLQDFLDYYYIGTNVLISEQDFFDLAWAYFKKVHKQGLVHAEVFYDPQSHTSRGISIETVTKGFQRACDKAFSEFGITSKLIMCLLRHIEPEECLKTIEEATPFIKDGTISALGLDSAEKPFPPHLFVECYGKAASLNKDLKLTAHAGEEGPAQFVSDALDLLQVTRIDHGINSQYDEELLDRLSRDQTMLTICPLSNVKLQVVQSVSELPLQKFLDRDVPFSLNSDDPAYFGGYILDVYTQVSKDFPHWDHETWGRIAKNAIKGSWCDDKRKNGLLSRVDEVVTKYSH"},{"created_at":"2011-05-26T17:02:57.000Z","updated_at":"2011-05-27T15:01:01.000Z","name":"Threonine dehydratase, mitochondrial","uniprot_id":"P00927","uniprot_name":"THDH_YEAST","enzyme":true,"transporter":false,"gene_name":"ILV1","num_residues":576,"molecular_weight":"63830.69922","theoretical_pi":"8.77","general_function":"Involved in catalytic activity","specific_function":"L-threonine = 2-oxobutanoate + NH(3)","reactions":[{"id":1706,"direction":"\u003e","locations":"mitochondrion;cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2460,"direction":"\u003e","locations":"Mitochondrion","altext":"L-threonine = 2-oxobutanoate + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Mitochondrion","genbank_gene_id":"M36383","genbank_protein_id":"171752","gene_card_id":"ILV1","chromosome_location":"chromosome 5","locus":"YER086W","synonyms":["Threonine deaminase"],"enzyme_classes":["4.3.1.19"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" ammonia-lyase activity"},{"category":"Function","description":" L-threonine ammonia-lyase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" lyase activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" cofactor binding"},{"category":"Function","description":" pyridoxal phosphate binding"},{"category":"Function","description":" carbon-nitrogen lyase activity"},{"category":"Process","description":" branched chain family amino acid metabolic process"},{"category":"Process","description":" isoleucine metabolic process"},{"category":"Process","description":" isoleucine biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"}],"pfams":[{"name":"PALP","identifier":"PF00291"},{"name":"Thr_dehydrat_C","identifier":"PF00585"}],"pathways":[{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"},{"name":"Valine, leucine and isoleucine 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L-serine/threonine dehydratase","uniprot_id":"P25379","uniprot_name":"STDH_YEAST","enzyme":true,"transporter":false,"gene_name":"CHA1","num_residues":360,"molecular_weight":"39301.0","theoretical_pi":"9.01","general_function":"Involved in catalytic activity","specific_function":"L-serine = pyruvate + NH(3)","reactions":[{"id":1703,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1706,"direction":"\u003e","locations":"mitochondrion;cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2461,"direction":"\u003e","locations":"Cytoplasm;Mitochondrion","altext":"L-serine = pyruvate + NH(3).","export":false,"pw_reaction_id":null,"source":null},{"id":2460,"direction":"\u003e","locations":"Mitochondrion","altext":"L-threonine = 2-oxobutanoate + NH(3).","export":false,"pw_reaction_id":null,"source":null},{"id":3864,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006385","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Mitochondrion","genbank_gene_id":"M85194","genbank_protein_id":"172589","gene_card_id":"CHA1","chromosome_location":"chromosome 3","locus":"YCL064C","synonyms":["L-serine dehydratase","L-serine deaminase","L-threonine dehydratase","L-threonine deaminase"],"enzyme_classes":["4.3.1.17","4.3.1.19"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" cofactor binding"},{"category":"Function","description":" pyridoxal phosphate binding"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"}],"pfams":[{"name":"PALP","identifier":"PF00291"}],"pathways":[{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"},{"name":"Valine, leucine and isoleucine biosynthesis","kegg_map_id":"00290"},{"name":"serine 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growth protein 1","uniprot_id":"P21375","uniprot_name":"OSM1_YEAST","enzyme":true,"transporter":false,"gene_name":"OSM1","num_residues":501,"molecular_weight":"55064.80078","theoretical_pi":"9.51","general_function":"Involved in electron carrier activity","specific_function":"Could be a fumarate reductase","reactions":[{"id":1555,"direction":"\u003e","locations":"mitochondrion;cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1556,"direction":"\u003c\u003e","locations":"mitochondrion;cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":3732,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006258","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm (Probable)","genbank_gene_id":"L26347","genbank_protein_id":"695798","gene_card_id":"OSM1","chromosome_location":"chromosome 10","locus":"YJR051W","synonyms":[],"enzyme_classes":[],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" oxidoreductase activity"},{"category":"Function","description":" electron carrier activity"},{"category":"Function","description":" oxidoreductase activity, acting on the CH-CH group of donors"},{"category":"Function","description":" succinate dehydrogenase activity"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" oxidation reduction"}],"pfams":[{"name":"FAD_binding_2","identifier":"PF00890"}],"pathways":[],"gene_sequence":"ATGATTAGATCTGTGAGAAGGGTTTTCATTTACGTCTCAATATTCGTATTGATAATAGTTTTGAAAAGAACATTAAGTGGCACAGATCAAACGTCAATGAAACAACCAGTGGTGGTCATTGGCTCTGGTTTGGCAGGCTTAACCACAAGTAATCGTCTCATTAGTAAATACAGAATTCCTGTTGTGCTTTTGGATAAGGCGGCTTCTATTGGTGGGAATTCTATAAAGGCTTCTAGTGGTATTAATGGTGCTCACACAGACACTCAACAAAATTTAAAGGTAATGGACACTCCCGAATTGTTTTTGAAAGATACTTTGCATTCGGCTAAAGGCAGAGGGGTTCCATCACTGATGGATAAGTTGACTAAGGAATCCAAGAGTGCTATCAGGTGGTTGCAAACAGAATTCGATTTGAAATTAGACCTCCTTGCGCAATTGGGCGGTCACTCTGTTCCAAGGACCCATAGATCTTCTGGCAAATTACCACCAGGTTTTGAAATCGTGCAAGCGTTATCAAAAAAACTAAAGGATATCTCTTCCAAAGATTCCAATCTCGTGCAGATTATGCTAAACAGTGAAGTAGTGGATATCGAGCTTGATAATCAAGGTCATGTTACTGGTGTAGTATATATGGACGAGAACGGAAACCGTAAAATCATGAAGTCACACCATGTCGTGTTTTGCTCAGGTGGATTTGGTTACTCTAAGGAAATGTTGAAAGAGTACTCACCAAATTTGATTCACTTGCCAACTACTAATGGCAAACAGACTACAGGTGATGGTCAAAAAATCCTTTCAAAGTTGGGTGCCGAATTGATTGATATGGATCAAGTGCAGGTACACCCTACCGGCTTCATTGATCCAAATGACCGTGAAAATAACTGGAAGTTTTTGGCTGCAGAGGCATTGAGGGGTTTAGGCGGCATCTTATTGCATCCCACCACTGGAAGAAGGTTTACAAATGAATTGAGCACCAGAGATACAGTAACCATGGAAATACAGTCTAAATGTCCGAAAAATGATAATAGAGCACTTTTGGTAATGAGCGACAAAGTCTACGAGAACTATACGAATAACATAAACTTTTATATGTCCAAAAACTTAATCAAAAAAGTGTCAATCAACGATCTGATCCGACAATATGACCTACAAACTACAGCTTCTGAACTGGTAACTGAACTGAAGAGCTATTCCGATGTTAATACTAAGGATACGTTTGATAGGCCATTGATTATCAATGCCTTTGATAAAGATATTTCGACTGAATCAACTGTTTATGTTGGGGAAGTTACACCAGTTGTTCATTTCACAATGGGTGGTGTGAAAATTAATGAGAAATCTCAGGTAATTAAGAAAAATTCGGAAAGCGTTCTATCTAATGGGATATTTGCTGCTGGTGAAGTTTCGGGTGGTGTTCATGGAGCCAACAGATTGGGTGGATCTAGTTTGTTAGAGTGTGTTGTCTTTGGAAAGACAGCTGCGGATAACATAGCAAAATTGTACTGA","protein_sequence":"MIRSVRRVFIYVSIFVLIIVLKRTLSGTDQTSMKQPVVVIGSGLAGLTTSNRLISKYRIPVVLLDKAASIGGNSIKASSGINGAHTDTQQNLKVMDTPELFLKDTLHSAKGRGVPSLMDKLTKESKSAIRWLQTEFDLKLDLLAQLGGHSVPRTHRSSGKLPPGFEIVQALSKKLKDISSKDSNLVQIMLNSEVVDIELDNQGHVTGVVYMDENGNRKIMKSHHVVFCSGGFGYSKEMLKEYSPNLIHLPTTNGKQTTGDGQKILSKLGAELIDMDQVQVHPTGFIDPNDRENNWKFLAAEALRGLGGILLHPTTGRRFTNELSTRDTVTMEIQSKCPKNDNRALLVMSDKVYENYTNNINFYMSKNLIKKVSINDLIRQYDLQTTASELVTELKSYSDVNTKDTFDRPLIINAFDKDISTESTVYVGEVTPVVHFTMGGVKINEKSQVIKKNSESVLSNGIFAAGEVSGGVHGANRLGGSSLLECVVFGKTAADNIAKLY"},{"created_at":"2011-05-26T18:08:56.000Z","updated_at":"2011-07-22T17:54:34.000Z","name":"Cytosine deaminase","uniprot_id":"Q12178","uniprot_name":"FCY1_YEAST","enzyme":true,"transporter":false,"gene_name":"FCY1","num_residues":158,"molecular_weight":"17506.90039","theoretical_pi":"5.73","general_function":"Involved in zinc ion binding","specific_function":"Converts cytosine to uracil or 5-methylcytosine to thymine by deaminating carbon number 4","reactions":[{"id":1430,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2510,"direction":"\u003e","locations":"Cytoplasmic","altext":"Cytosine + H(2)O = uracil + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1UAQ","cellular_location":"Cytoplasmic","genbank_gene_id":"AF005261","genbank_protein_id":"2343114","gene_card_id":"FCY1","chromosome_location":"chromosome 16","locus":"YPR062W","synonyms":["Cytosine aminohydrolase"],"enzyme_classes":["3.5.4.1"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" ion binding"},{"category":"Function","description":" cation binding"},{"category":"Function","description":" metal ion binding"},{"category":"Function","description":" transition metal ion binding"},{"category":"Function","description":" zinc ion binding"},{"category":"Function","description":" hydrolase activity"},{"category":"Process","description":" Not Available"}],"pfams":[{"name":"dCMP_cyt_deam_1","identifier":"PF00383"}],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"},{"name":"Arginine and proline metabolism","kegg_map_id":"00330"}],"gene_sequence":"ATGGTGACAGGGGGAATGGCAAGCAAGTGGGATCAGAAGGGTATGGACATTGCCTATGAGGAGGCGGCCTTAGGTTACAAAGAGGGTGGTGTTCCTATTGGCGGATGTCTTATCAATAACAAAGACGGAAGTGTTCTCGGTCGTGGTCACAACATGAGATTTCAAAAGGGTTCCGCCACACTACATGGTGAGATCTCCACTTTGGAAAACTGTGGGAGATTAGAGGGCAAAGTGTACAAAGATACCACTTTGTATACGACGCTGTCTCCATGCGACATGTGTACAGGTGCCATCATCATGTATGGTATTCCACGCTGTGTTGTCGGTGAGAACGTTAATTTCAAAAGTAAGGGCGAGAAATATTTACAAACTAGAGGTCACGAGGTTGTTGTTGTTGACGATGAGAGGTGTAAAAAGATCATGAAACAATTTATCGATGAAAGACCTCAGGATTGGTTTGAAGATATTGGTGAGTAG","protein_sequence":"MVTGGMASKWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLEGKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSKGEKYLQTRGHEVVVVDDERCKKIMKQFIDERPQDWFEDIGE"},{"created_at":"2011-05-26T18:09:25.000Z","updated_at":"2011-05-27T15:01:03.000Z","name":"Nicotinamidase","uniprot_id":"P53184","uniprot_name":"PNC1_YEAST","enzyme":true,"transporter":false,"gene_name":"PNC1","num_residues":216,"molecular_weight":"24993.19922","theoretical_pi":"6.23","general_function":"Involved in catalytic activity","specific_function":"Catalyzes the deamidation of nicotinamide, an early step in the NAD(+) salvage pathway. Positively regulates SIR2-mediated silencing and longevity by preventing the accumulation of intracellular nicotinamide, an inhibitor of SIR2, during times of stress. Acts also on nicotinyl hydroxamate","reactions":[{"id":1775,"direction":"\u003c\u003e","locations":"mitochondrion;cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2511,"direction":"\u003e","locations":"Cytoplasm. Nucleus. Peroxisome.","altext":"Nicotinamide + H(2)O = nicotinate + NH(3).","export":false,"pw_reaction_id":null,"source":null},{"id":4194,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006493","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm. Nucleus. Peroxisome.","genbank_gene_id":"AY558481","genbank_protein_id":"45270852","gene_card_id":"PNC1","chromosome_location":"chromosome 7","locus":"YGL037C","synonyms":["Nicotine deamidase","NAMase"],"enzyme_classes":["3.5.1.19"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"Isochorismatase","identifier":"PF00857"}],"pathways":[{"name":"Nicotinate and nicotinamide metabolism","kegg_map_id":"00760"},{"name":"NAD metabolism","kegg_map_id":null}],"gene_sequence":"ATGAAGACTTTAATTGTTGTTGATATGCAAAATGATTTTATTTCACCTTTAGGTTCCTTGACTGTTCCAAAAGGTGAGGAATTAATCAATCCTATCTCGGATTTGATGCAAGATGCTGATAGAGACTGGCACAGGATTGTGGTCACCAGAGATTGGCACCCTTCCAGACATATTTCGTTCGCAAAGAACCATAAAGATAAAGAACCCTATTCAACATACACCTACCACTCTCCAAGGCCAGGCGATGATTCCACGCAAGAGGGTATTTTGTGGCCCGTACACTGTGTGAAAAACACCTGGGGTAGTCAATTGGTTGACCAAATAATGGACCAAGTGGTCACTAAGCATATTAAGATTGTCGACAAGGGTTTCTTGACTGACCGTGAATACTACTCCGCCTTCCACGACATCTGGAACTTCCATAAGACCGACATGAACAAGTACTTAGAAAAGCATCATACAGACGAGGTTTACATTGTCGGTGTAGCTTTGGAGTATTGTGTCAAAGCCACCGCCATTTCCGCTGCAGAACTAGGTTATAAGACCACTGTCCTGCTGGATTACACAAGACCCATCAGCGATGATCCCGAAGTCATCAATAAGGTTAAGGAAGAGTTGAAGGCCCACAACATCAATGTCGTGGATAAATAA","protein_sequence":"MKTLIVVDMQNDFISPLGSLTVPKGEELINPISDLMQDADRDWHRIVVTRDWHPSRHISFAKNHKDKEPYSTYTYHSPRPGDDSTQEGILWPVHCVKNTWGSQLVDQIMDQVVTKHIKIVDKGFLTDREYYSAFHDIWNFHKTDMNKYLEKHHTDEVYIVGVALEYCVKATAISAAELGYKTTVLLDYTRPISDDPEVINKVKEELKAHNINVVDK"},{"created_at":"2011-05-26T18:10:06.000Z","updated_at":"2011-05-27T15:01:03.000Z","name":"NAD-specific glutamate dehydrogenase","uniprot_id":"P33327","uniprot_name":"DHE2_YEAST","enzyme":true,"transporter":false,"gene_name":"GDH2","num_residues":1092,"molecular_weight":"124331.0","theoretical_pi":"5.46","general_function":"Involved in oxidoreductase activity","specific_function":"L-glutamate + H(2)O + NAD(+) = 2-oxoglutarate + NH(3) + NADH","reactions":[{"id":1572,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2512,"direction":"\u003e","locations":null,"altext":"L-glutamate + H(2)O + NAD(+) = 2-oxoglutarate + NH(3) + NADH.","export":false,"pw_reaction_id":null,"source":null},{"id":3742,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006269","source":"Smpdb"},{"id":3746,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006273","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":"X72015","genbank_protein_id":"396751","gene_card_id":"GDH2","chromosome_location":"chromosome 4","locus":"YDL215C","synonyms":["NAD-GDH"],"enzyme_classes":["1.4.1.2"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" glutamate dehydrogenase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor"},{"category":"Function","description":" oxidoreductase activity, acting on the CH-NH2 group of donors"},{"category":"Function","description":" oxidoreductase activity"},{"category":"Process","description":" organic acid metabolic process"},{"category":"Process","description":" oxoacid metabolic process"},{"category":"Process","description":" carboxylic acid metabolic process"},{"category":"Process","description":" dicarboxylic acid metabolic process"},{"category":"Process","description":" 2-oxoglutarate metabolic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" glutamate catabolic process to 2-oxoglutarate"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"},{"category":"Process","description":" oxidation reduction"}],"pfams":[{"name":"Bac_GDH","identifier":"PF05088"},{"name":"ELFV_dehydrog","identifier":"PF00208"}],"pathways":[{"name":"Alanine, aspartate and glutamate metabolism","kegg_map_id":"00250"},{"name":"Arginine and proline metabolism","kegg_map_id":"00330"},{"name":"Nitrogen metabolism","kegg_map_id":"00910"},{"name":"Glutamate Metabolism","kegg_map_id":null}],"gene_sequence":"ATGCTTTTTGATAACAAAAATCGCGGTGCTTTAAACTCACTGAACACACCAGATATTGCTTCTTTATCAATATCATCCATGTCGGACTATCACGTGTTTGATTTTCCCGGTAAGGACCTGCAGAGAGAGGAAGTGATAGATTTGCTAGATCAGCAAGGGTTTATTCCCGACGATTTGATCGAACAAGAAGTAGATTGGTTTTATAACTCATTGGGTATTGACGATTTGTTCTTCTCGAGAGAATCTCCCCAATTAATCTCGAATATCATACATTCTTTGTATGCTTCAAAGCTAGATTTCTTTGCGAAGTCCAAATTCAACGGAATTCAGCCAAGGCTATTCAGCATTAAAAACAAAATTATAACTAATGATAATCATGCCATCTTTATGGAATCTAATACTGGTGTCAGCATAAGCGATTCTCAGCAAAAAAACTTTAAATTTGCTAGTGACGCCGTCGGAAACGATACTTTGGAGCATGGTAAGGATACCATCAAAAAAAATAGGATTGAAATGGATGATTCTTGTCCACCTTATGAATTAGATTCCGAAATTGATGACCTTTTCCTGGATAACAAGTCTCAAAAAAACTGCAGATTAGTTTCTTTTTGGGCTCCAGAAAGCGAATTAAAGCTAACTTTTGTTTATGAGAGTGTTTACCCTAATGATGATCCAGCCGGCGTAGATATTTCCTCTCAGGATTTGCTGAAAGGTGATATTGAATCGATTAGTGATAAGACCATGTACAAAGTTTCGTCGAACGAAAATAAAAAACTATACGGTCTCTTACTTAAGTTGGTTAAAGAAAGAGAAGGTCCTGTCATTAAGACTACTCGCTCCGTAGAAAATAAGGATGAAATTAGGTTATTAGTCGCTTACAAGCGATTCACCACTAAGCGTTATTACTCTGCTTTGAACTCTTTGTTCCACTATTACAAGTTGAAACCTTCTAAGTTCTATTTAGAGTCGTTTAATGTTAAGGATGATGACATCATTATCTTTTCCGTTTATTTGAACGAGAACCAGCAATTGGAAGATGTTCTACTTCACGATGTGGAGGCAGCATTGAAACAGGTTGAAAGAGAAGCTTCATTGCTATACGCTATCCCAAACAATTCTTTCCATGAGGTTTACCAGAGACGTCAATTCTCGCCCAAAGAAGCTATATATGCTCATATTGGTGCTATATTCATTAACCATTTTGTTAATCGTTTAGGCTCTGATTATCAAAACCTTTTATCTCAAATCACCATTAAGCGTAATGATACTACTCTTTTGGAGATTGTAGAAAACCTAAAAAGAAAGTTAAGAAATGAAACCTTAACTCAGCAAACTATTATCAACATCATGTCGAAGCATTACACTATAATTTCCAAGTTGTATAAAAATTTTGCTCAAATTCACTATTATCATAATAGTACTAAAGATATGGAGAAGACATTATCTTTTCAAAGACTGGAAAAAGTGGAGCCTTTTAAGAATGACCAAGAGTTCGAAGCTTACTTGAATAAATTCATTCCAAATGATTCACCTGATTTGTTGATCCTGAAAACACTGAACATCTTCAACAAGTCTATTTTGAAGACAAATTTCTTTATTACAAGAAAAGTAGCAATATCATTCAGATTAGATCCTTCCCTGGTGATGACAAAATTCGAATATCCAGAGACACCCTATGGTATATTTTTTGTCGTTGGTAATACTTTCAAAGGGTTCCATATCAGGTTCAGAGATATCGCAAGGGGCGGTATTCGTATAGTCTGTTCCAGGAATCAGGATATTTATGATTTGAATTCCAAGAACGTTATTGATGAGAACTATCAATTGGCCTCTACTCAGCAACGTAAAAATAAGGATATTCCAGAGGGTGGCTCTAAAGGTGTCATCTTATTGAACCCAGGATTGGTAGAACATGACCAGACATTTGTCGCCTTTTCCCAATATGTGGATGCAATGATTGACATTCTAATCAACGATCCATTAAAGGAAAACTATGTCAACCTTTTACCAAAGGAGGAAATATTATTTTTTGGCCCAGATGAAGGAACTGCTGGTTTCGTGGATTGGGCAACTAACCATGCTCGTGTGAGGAACTGCCCATGGTGGAAATCATTTTTGACTGGAAAATCCCCATCTTTGGGTGGTATTCCCCATGACGAATATGGTATGACTTCTCTGGGTGTTCGTGCTTATGTTAATAAAATTTACGAAACTTTAAACTTGACAAATTCTACTGTTTACAAATTCCAAACTGGTGGTCCGGATGGTGATTTGGGATCCAATGAAATTCTTTTATCTTCGCCAAACGAATGTTATTTGGCAATTCTGGACGGTTCAGGTGTCCTGTGTGATCCTAAAGGTTTAGATAAAGATGAATTATGCCGCTTGGCACATGAAAGGAAAATGATTTCCGATTTCGACACTTCCAAATTATCAAACAACGGATTTTTTGTTTCTGTGGATGCAATGGATATCATGCTACCAAATGGTACAATTGTAGCTAACGGCACAACCTTCAGAAACACCTTTCATACTCAAATTTTCAAATTTGTGGATCATGTCGACATTTTTGTTCCATGCGGTGGTAGACCAAACTCAATTACTCTAAATAATCTACATTATTTTGTTGACGAAAAGACTGGGAAATGTAAAATTCCATATATTGTGGAGGGTGCCAATCTATTTATAACGCAACCTGCTAAAAATGCTTTGGAGGAACATGGCTGTATTCTGTTCAAAGATGCTTCTGCAAACAAAGGTGGTGTCACATCTTCATCAATGGAAGTGTTGGCCTCACTAGCGCTTAACGATAACGACTTCGTGCACAAATTTATTGGAGATGTTAGTGGTGAGAGGTCTGCGTTGTACAAGTCGTACGTTGTAGAAGTGCAGTCAAGAATTCAGAAAAATGCTGAATTAGAGTTTGGTCAGTTATGGAATTTGAATCAACTAAATGGAACCCACATTTCAGAAATTTCAAACCAATTGTCCTTCACTATAAACAAATTGAACGACGATCTAGTTGCTTCTCAAGAGTTGTGGCTCAATGATCTAAAATTAAGAAACTACCTATTGTTGGATAAAATAATTCCAAAAATTCTGATTGATGTTGCTGGGCCTCAGTCCGTATTGGAAAACATTCCAGAGAGCTATTTGAAAGTTCTTCTGTCGAGTTACTTATCAAGCACTTTTGTTTACCAGAACGGTATCGATGTTAACATTGGAAAATTCTTGGAATTTATTGGTGGGTTAAAAAGAGAAGCGGAGGCAAGTGCTTGA","protein_sequence":"MLFDNKNRGALNSLNTPDIASLSISSMSDYHVFDFPGKDLQREEVIDLLDQQGFIPDDLIEQEVDWFYNSLGIDDLFFSRESPQLISNIIHSLYASKLDFFAKSKFNGIQPRLFSIKNKIITNDNHAIFMESNTGVSISDSQQKNFKFASDAVGNDTLEHGKDTIKKNRIEMDDSCPPYELDSEIDDLFLDNKSQKNCRLVSFWAPESELKLTFVYESVYPNDDPAGVDISSQDLLKGDIESISDKTMYKVSSNENKKLYGLLLKLVKEREGPVIKTTRSVENKDEIRLLVAYKRFTTKRYYSALNSLFHYYKLKPSKFYLESFNVKDDDIIIFSVYLNENQQLEDVLLHDVEAALKQVEREASLLYAIPNNSFHEVYQRRQFSPKEAIYAHIGAIFINHFVNRLGSDYQNLLSQITIKRNDTTLLEIVENLKRKLRNETLTQQTIINIMSKHYTIISKLYKNFAQIHYYHNSTKDMEKTLSFQRLEKVEPFKNDQEFEAYLNKFIPNDSPDLLILKTLNIFNKSILKTNFFITRKVAISFRLDPSLVMTKFEYPETPYGIFFVVGNTFKGFHIRFRDIARGGIRIVCSRNQDIYDLNSKNVIDENYQLASTQQRKNKDIPEGGSKGVILLNPGLVEHDQTFVAFSQYVDAMIDILINDPLKENYVNLLPKEEILFFGPDEGTAGFVDWATNHARVRNCPWWKSFLTGKSPSLGGIPHDEYGMTSLGVRAYVNKIYETLNLTNSTVYKFQTGGPDGDLGSNEILLSSPNECYLAILDGSGVLCDPKGLDKDELCRLAHERKMISDFDTSKLSNNGFFVSVDAMDIMLPNGTIVANGTTFRNTFHTQIFKFVDHVDIFVPCGGRPNSITLNNLHYFVDEKTGKCKIPYIVEGANLFITQPAKNALEEHGCILFKDASANKGGVTSSSMEVLASLALNDNDFVHKFIGDVSGERSALYKSYVVEVQSRIQKNAELEFGQLWNLNQLNGTHISEISNQLSFTINKLNDDLVASQELWLNDLKLRNYLLLDKIIPKILIDVAGPQSVLENIPESYLKVLLSSYLSSTFVYQNGIDVNIGKFLEFIGGLKREAEASA"},{"created_at":"2011-05-26T18:10:35.000Z","updated_at":"2011-05-27T15:01:03.000Z","name":"L-asparaginase 2","uniprot_id":"P11163","uniprot_name":"ASPG2_YEAST","enzyme":true,"transporter":false,"gene_name":"ASP3-1","num_residues":362,"molecular_weight":"38686.19922","theoretical_pi":"4.44","general_function":"Involved in asparaginase activity","specific_function":"L-asparagine + H(2)O = L-aspartate + NH(3)","reactions":[{"id":1695,"direction":null,"locations":"extracellular","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2513,"direction":"\u003e","locations":"Cytoplasm;Secreted, cell wall","altext":"L-asparagine + H(2)O = L-aspartate + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"1-25","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Secreted, cell wall","genbank_gene_id":"AY557957","genbank_protein_id":"45269806","gene_card_id":"ASP3-1","chromosome_location":"chromosome 12","locus":"YLR155C","synonyms":["L-asparaginase II","L-asparagine amidohydrolase II","ASP II"],"enzyme_classes":["3.5.1.1"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" asparaginase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" hydrolase activity"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"},{"category":"Process","description":" aspartate family amino acid metabolic process"},{"category":"Process","description":" asparagine metabolic process"}],"pfams":[{"name":"Asparaginase","identifier":"PF00710"}],"pathways":[{"name":"Alanine, aspartate and glutamate metabolism","kegg_map_id":"00250"},{"name":"Cyanoamino acid metabolism","kegg_map_id":"00460"},{"name":"Nitrogen metabolism","kegg_map_id":"00910"}],"gene_sequence":"ATGAGATCTTTAAATACCCTTTTACTTTCTCTCTTTGTCGCAATGTCCAGTGGTGCTCCACTACTAAAAATTCGTGAAGAGAAGAATTCTCCTTTGCCATCAATCAAAATTTTTGGTACCGGCGGTACTATCGCTTCCAAGGGTTCGACAAGTGCAACAACGGCGGGTTATAGCGTGGGATTAACCGTAAATGATTTAATAGAAGCCGTCCCATCTTTAGCTGAGAAGGCAAATCTGGACTATCTTCAAGTGTCTAACGTTGGTTCAAATTCTTTAAACTATACGCATCTGATCCCATTGTATCACGGTATCTCCGAGGCACTAGCCTCTGATGACTACGCTGGTGCGGTTGTCACTCATGGGACCGACACTATGGAGGAGACAGCTTTCTTCTTAGATTTGACCATAAATTCAGAGAAGCCAGTATGTATCGCAGGCGCTATGCGTCCAGCCACTGCCACGTCTGCTGATGGCCCAATGAATTTATATCAAGCAGTGTCTATTGCTGCTTCTGAGAAATCACTGGGTCGTGGCACGATGATCACTCTAAACGATCGTATTGCCTCTGGGTTTTGGACAACGAAAATGAATGCCAACTCTTTAGATACATTCAGAGCGGATGAACAGGGATATTTAGGTTACTTTTCAAATGATGACGTGGAGTTTTACTACCCACCAGTCAAGCCAAATGGATGGCAATTTTTTGACATTTCCAACCTCACAGACCCTTCGGAAATTCCAGAAGTCATTATTCTGTACTCCTATCAAGGCTTGAATCCTGAGCTAATAGTAAAGGCCGTCAAGGACCTGGGCGCAAAAGGTATCGTGTTGGCGGGTTCTGGAGCTGGTTCCTGGACTGCTACGGGTAGTATTGTAAACGAACAACTTTATGAAGAGTATGGTATACCAATTGTTCACAGCAGAAGAACAGCAGATGGTACAGTTCCTCCAGATGATGCCCCAGAGTACGCCATTGGATCTGGCTACCTAAACCCTCAAAAATCGCGTATTTTGCTACAATTATGTTTGTACTCCGGCTACGGCATGGATCAGATTAGGTCTGTTTTTTCTGGCGTCTACGGTGGTTAA","protein_sequence":"MRSLNTLLLSLFVAMSSGAPLLKIREEKNSSLPSIKIFGTGGTIASKGSTSATTAGYSVGLTVNDLIEAVPSLAEKANLDYLQVSNVGSNSLNYTHLIPLYHGISEALASDDYAGAVVTHGTDTMEETAFFLDLTINSEKPVCIAGAMRPATATSADGPMNLYQAVSIAASEKSLGRGTMITLNDRIASGFWTTKMNANSLDTFRADEQGYLGYFSNDDVEFYYPPVKPNGWQFFDISNLTDPSEIPEVIILYSYQGLNPELIVKAVKDLGAKGIVLAGSGAGSWTATGSIVNEQLYEEYGIPIVHSRRTADGTVPPDDAPEYAIGSGYLNPQKSRILLQLCLYSGYGMDQIRSVFSGVYGG"},{"created_at":"2011-05-26T18:11:13.000Z","updated_at":"2011-05-27T15:01:03.000Z","name":"NADP-specific glutamate dehydrogenase 2","uniprot_id":"P39708","uniprot_name":"DHE5_YEAST","enzyme":true,"transporter":false,"gene_name":"GDH3","num_residues":457,"molecular_weight":"49626.80078","theoretical_pi":"5.12","general_function":"Involved in oxidoreductase activity","specific_function":"L-glutamate + H(2)O + NADP(+) = 2-oxoglutarate + NH(3) + NADPH","reactions":[{"id":1573,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2514,"direction":"\u003e","locations":"","altext":"L-glutamate + H(2)O + NADP(+) = 2-oxoglutarate + NH(3) + NADPH.","export":false,"pw_reaction_id":null,"source":null},{"id":3745,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006272","source":"Smpdb"},{"id":14890,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R007081","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":"U12980","genbank_protein_id":"595524","gene_card_id":"GDH3","chromosome_location":"chromosome 1","locus":"YAL062W","synonyms":["NADP-GDH 2","NADP-dependent glutamate dehydrogenase 2"],"enzyme_classes":["1.4.1.4"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor"},{"category":"Function","description":" oxidoreductase 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Metabolism","kegg_map_id":null}],"gene_sequence":"ATGACAAGCGAACCAGAGTTTCAGCAGGCTTACGATGAGATCGTTTCTTCTGTGGAGGATTCCAAAATTTTTGAAAAATTCCCACAGTATAAAAAAGTGTTACCTATTGTTTCTGTCCCGGAGAGGATCATTCAATTCAGGGTCACGTGGGAAAATGATAATGGCGAGCAAGAAGTGGCTCAAGGATACAGGGTGCAGTTCAATTCAGCCAAGGGCCCTTACAAGGGTGGCCTACGCTTCCACCCATCAGTGAACCTGTCTATCCTAAAATTTTTGGGTTTTGAACAGATCTTCAAGAATGCGCTCACTGGGCTAGATATGGGCGGTGGTAAGGGTGGCCTGTGTGTGGACTTGAAAGGCAAGTCTGACAACGAGATCAGAAGGATTTGTTATGCGTTCATGAGAGAACTGAGCAGGCATATTGGTAAGGACACAGACGTGCCCGCAGGAGATATTGGTGTCGGTGGCCGTGAAATTGGCTACCTATTCGGCGCTTACAGATCATACAAGAACTCCTGGGAAGGTGTGTTGACTGGTAAGGGTTTAAACTGGGGTGGCTCACTTATCAGGCCGGAGGCCACCGGGTTCGGCTTAGTTTACTATACGCAAGCAATGATCGATTATGCAACAAACGGCAAGGAGTCGTTTGAGGGCAAACGTGTGACAATCTCCGGAAGTGGCAATGTTGCGCAATATGCAGCTTTGAAAGTGATCGAGCTGGGTGGTATTGTGGTGTCTTTATCCGATTCGAAGGGGTGCATCATCTCTGAGACGGGCATTACTTCTGAGCAAATTCACGATATCGCTTCCGCCAAGATCCGTTTCAAGTCGTTAGAGGAAATCGTTGATGAATACTCTACTTTCAGCGAAAGTAAGATGAAGTACGTTGCAGGAGCACGCCCATGGACGCATGTGAGCAACGTCGACATTGCCTTGCCCTGTGCCACCCAAAACGAGGTCAGTGGTGACGAAGCCAAGGCCCTAGTGGCATCTGGCGTTAAGTTCGTTGCCGAAGGTGCTAACATGGGTTCTACACCCGAGGCTATTTCTGTTTTCGAAACAGCGCGTAGCACTGCAACCAATGCAAAGGATGCAGTTTGGTTTGGGCCACCAAAGGCAGCTAACCTGGGCGGCGTGGCAGTATCCGGTCTGGAAATGGCTCAGAATTCTCAAAAAGTAACTTGGACTGCCGAGCGGGTCGATCAAGAACTAAAGAAGATAATGATCAACTGCTTCAACGACTGCATACAGGCCGCACAAGAGTACTCTACGGAAAAAAATACAAACACCTTGCCATCATTGGTCAAGGGGGCCAACATTGCCAGCTTCGTCATGGTGGCTGACGCAATGCTTGACCAGGGAGACGTTTTTTAG","protein_sequence":"MTSEPEFQQAYDEIVSSVEDSKIFEKFPQYKKVLPIVSVPERIIQFRVTWENDNGEQEVAQGYRVQFNSAKGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLDMGGGKGGLCVDLKGKSDNEIRRICYAFMRELSRHIGKDTDVPAGDIGVGGREIGYLFGAYRSYKNSWEGVLTGKGLNWGGSLIRPEATGFGLVYYTQAMIDYATNGKESFEGKRVTISGSGNVAQYAALKVIELGGIVVSLSDSKGCIISETGITSEQIHDIASAKIRFKSLEEIVDEYSTFSESKMKYVAGARPWTHVSNVDIALPCATQNEVSGDEAKALVASGVKFVAEGANMGSTPEAISVFETARSTATNAKDAVWFGPPKAANLGGVAVSGLEMAQNSQKVTWTAERVDQELKKIMINCFNDCIQAAQEYSTEKNTNTLPSLVKGANIASFVMVADAMLDQGDVF"},{"created_at":"2011-05-26T18:11:47.000Z","updated_at":"2011-05-27T15:01:03.000Z","name":"Porphobilinogen deaminase","uniprot_id":"P28789","uniprot_name":"HEM3_YEAST","enzyme":true,"transporter":false,"gene_name":"HEM3","num_residues":327,"molecular_weight":"36674.19922","theoretical_pi":"6.32","general_function":"Involved in hydroxymethylbilane synthase activity","specific_function":"Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps","reactions":[{"id":1647,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2515,"direction":"\u003e","locations":null,"altext":"4 porphobilinogen + H(2)O = hydroxymethylbilane + 4 NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":"X99000","genbank_protein_id":"1429351","gene_card_id":"HEM3","chromosome_location":"chromosome 4","locus":"YDL205C","synonyms":["PBG","Hydroxymethylbilane 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biosynthetic process"},{"category":"Process","description":" cellular biosynthetic process"},{"category":"Process","description":" heterocycle biosynthetic process"},{"category":"Process","description":" tetrapyrrole biosynthetic process"}],"pfams":[{"name":"Porphobil_deam","identifier":"PF01379"},{"name":"Porphobil_deamC","identifier":"PF03900"}],"pathways":[{"name":"Porphyrin and chlorophyll 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mitochondrial","uniprot_id":"P48015","uniprot_name":"GCST_YEAST","enzyme":true,"transporter":false,"gene_name":"GCV1","num_residues":400,"molecular_weight":"44468.69922","theoretical_pi":"9.23","general_function":"Involved in aminomethyltransferase activity","specific_function":"The glycine cleavage system (glycine decarboxylase complex) catalyzes the degradation of glycine","reactions":[{"id":2516,"direction":"\u003e","locations":"Mitochondrion","altext":"[Protein]-S(8)-aminomethyldihydrolipoyllysine + tetrahydrofolate = [protein]-dihydrolipoyllysine + 5,10-methylenetetrahydrofolate + NH(3).","export":false,"pw_reaction_id":null,"source":null},{"id":3846,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006369","source":"Smpdb"},{"id":3847,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006688","source":"Smpdb"},{"id":3848,"direction":"\u003c\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006690","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Mitochondrion","genbank_gene_id":"L41522","genbank_protein_id":"769682","gene_card_id":"GCV1","chromosome_location":"chromosome 4","locus":"YDR019C","synonyms":["Glycine cleavage system T protein","GCVT","Glycine decarboxylase complex subunit T"],"enzyme_classes":["2.1.2.10"],"go_classes":[{"category":"Component","description":" cell part"},{"category":"Component","description":" intracellular part"},{"category":"Component","description":" cytoplasm"},{"category":"Function","description":" aminomethyltransferase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" transferase activity, transferring one-carbon groups"},{"category":"Function","description":" methyltransferase activity"},{"category":"Process","description":" serine family amino acid metabolic process"},{"category":"Process","description":" glycine metabolic process"},{"category":"Process","description":" glycine catabolic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic 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process"},{"category":"Process","description":" asparagine metabolic process"}],"pfams":[{"name":"Asparaginase","identifier":"PF00710"}],"pathways":[{"name":"Alanine, aspartate and glutamate metabolism","kegg_map_id":"00250"},{"name":"Cyanoamino acid metabolism","kegg_map_id":"00460"},{"name":"Nitrogen metabolism","kegg_map_id":"00910"},{"name":"Asparagine 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glutamate dehydrogenase 1","uniprot_id":"P07262","uniprot_name":"DHE4_YEAST","enzyme":true,"transporter":false,"gene_name":"GDH1","num_residues":454,"molecular_weight":"49569.60156","theoretical_pi":"5.39","general_function":"Involved in oxidoreductase activity","specific_function":"L-glutamate + H(2)O + NADP(+) = 2-oxoglutarate + NH(3) + NADPH","reactions":[{"id":1573,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2514,"direction":"\u003e","locations":"","altext":"L-glutamate + H(2)O + NADP(+) = 2-oxoglutarate + NH(3) + 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Metabolism","kegg_map_id":null}],"gene_sequence":"ATGTCAGAGCCAGAATTTCAACAAGCTTACGAAGAAGTTGTCTCCTCTTTGGAAGACTCTACTCTTTTCGAACAACACCCAGAATACAGAAAGGTTTTGCCAATTGTTTCTGTTCCAGAAAGAATCATACAATTCAGAGTCACCTGGGAAAATGACAAGGGTGAACAAGAAGTTGCTCAAGGTTACAGAGTCCAATATAACTCCGCCAAGGGTCCATACAAGGGTGGTCTACGTTTCCATCCTTCCGGGAACTTGTCTATCTTGAAATTCTTGGGTTTCGAACAAATCTTCAAGAACTCCTTGACCGGCCTAGACATGGGTGGTGGTAAAGGTGGTCTATGTGTGGACTTGAAGGGAAGATCTAATAACGAAATCAGAAGAATCTGTTATGCTTTCATGAGAGAATTGAGCAGACACATTGGTCAAGACACTGACGTGCCAGCTGGTGATATCGGTGTTGGTGGTCGTGAAATTGGTTACCTGTTCGGTGCTTACAGATCATACAAGAACTCTTGGGAAGGTGTCTTAACCGGTAAGGGTTTGAACTGGGGTGGTTCTTTGATCAGACCAGAAGCCACTGGTTACGGTTTACTTTACTATACTCAAGCTATGATCGACTATGCCACAAACGGTAAGGAATCTTTCGAAGGTAAGCGCGTCACCATCTCTGGTAGTGGTAACGTTGCTCAATACGCTGCCTTGAAGGTTATTGAGCTAGGTGGTACTGTCGTTTCCCTATCTGACTCCAAGGGTTGTATCATCCTTGAAACTGGTATCACCTCCGAACAAGTCGCTGTTATTTCCAGTGCTAAGGTCAACTTCAAGTCCTTGGAACAAATCGTCAACGAATACTCTACTTTCTCCGAAAACAAAGTGCAATACATTGCTGGTGCTCGTCCATGGACCCACGTCCAAAAGGTCGACATTGCTTTGCCATGTGCCACCCAAAATGAAGTCAGCGGTGAAGAAGCCAAGGCCTTGGTTGCTCAAGGTGTCAAGTTTATTGCCGAAGGTTCCAACATGGGTTCCACTCCAGAAGCTATTGCCGTCTTTGAAACTGCTCGTTCCACCGCCACTGGACCAAGCGAAGCTGTTTGGTACGGTCCACCAAAGGCTGCTAACTTGGGTGGTGTTGCTGTTTCTGGTTTAGAAATGGCACAAAACTCTCAAAGAATCACATGGACTAGCGAAAGAGTTGACCAAGAGTTGAAGAGAATTATGATCAACTGTTTCAATGAATGTATCGACTATGCCAAGAAGTACACTAAGGACGGTAAGGTCTTGCCATCTTTGGTCAAAGGTGCTAATATCGCAAGTTTCATCAAGGTCTCTGATGCTATGTTTGACCAAGGTGATGTATTTTAA","protein_sequence":"MSEPEFQQAYEEVVSSLEDSTLFEQHPEYRKVLPIVSVPERIIQFRVTWENDKGEQEVAQGYRVQYNSAKGPYKGGLRFHPSVNLSILKFLGFEQIFKNSLTGLDMGGGKGGLCVDLKGRSNNEIRRICYAFMRELSRHIGQDTDVPAGDIGVGGREIGYLFGAYRSYKNSWEGVLTGKGLNWGGSLIRPEATGYGLVYYTQAMIDYATNGKESFEGKRVTISGSGNVAQYAALKVIELGGTVVSLSDSKGCIISETGITSEQVADISSAKVNFKSLEQIVNEYSTFSENKVQYIAGARPWTHVQKVDIALPCATQNEVSGEEAKALVAQGVKFIAEGSNMGSTPEAIAVFETARSTATGPSEAVWYGPPKAANLGGVAVSGLEMAQNSQRITWTSERVDQELKRIMINCFNECIDYAKKYTKDGKVLPSLVKGANIASFIKVSDAMFDQGDVF"},{"created_at":"2011-05-26T18:13:58.000Z","updated_at":"2011-05-27T15:01:03.000Z","name":"Threo-3-hydroxyaspartate 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binding"},{"category":"Function","description":" pyridoxal phosphate binding"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"}],"pfams":[{"name":"PALP","identifier":"PF00291"}],"pathways":[{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"},{"name":"Cysteine and methionine metabolism","kegg_map_id":"00270"}],"gene_sequence":"ATGGAAATGACTTACTATGAAAAGACACCTTTGATTCGTCAATTTTTGAACAATGGTAAGACAAATTCGTGGTTTTACGTTAAGCATGAGATGTTACAACCAGGTGGAAGTTTCAAATCGAGAGGAATCGGGCATTTGATAAGGAAGAGTAATGAAGAAGCGCTAAGCGAGGGTTCTGGGAAGCTTGCTGTATTTTCTAGCTCTGGGGGAAATGCTGGTTTAGCAGCAGCAACTGCCTGCAGATCGATGGCACTTAATTGCAGTGTAGTGGTTCCTAAAACTACAAAACCTAGAATGGTAAAGAAAATTCAAAGTGCAGGAGCCAAAGTCATTATCCATGGTGATCATTGGGGGGAAGCAGATGAATACTTGAGGCACGAATGA","protein_sequence":"MEMTYYEKTPLIRQFLNNGKTNSWFYVKHEMLQPGGSFKSRGIGHLIRKSNEEALSEGSGKLAVFSSSGGNAGLAAATACRSMALNCSVVVPKTTKPRMVKKIQSAGAKVIIHGDHWGEADEYLRHE"},{"created_at":"2011-05-26T18:14:55.000Z","updated_at":"2011-07-22T17:54:32.000Z","name":"Cystathionine beta-lyase","uniprot_id":"P53101","uniprot_name":"STR3_YEAST","enzyme":true,"transporter":false,"gene_name":"STR3","num_residues":465,"molecular_weight":"51828.0","theoretical_pi":"8.1","general_function":"Involved in pyridoxal phosphate binding","specific_function":"L-cystathionine + H(2)O = L-homocysteine + NH(3) + pyruvate","reactions":[{"id":1418,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2518,"direction":"\u003e","locations":"Cytoplasm. 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Nucleus","genbank_gene_id":"X91489","genbank_protein_id":"1143563","gene_card_id":"STR3","chromosome_location":"chromosome 7","locus":"YGL184C","synonyms":["CBL","Beta-cystathionase","Cysteine lyase","Sulfur transfer protein 3"],"enzyme_classes":["4.4.1.8"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" cystathionine beta-lyase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" lyase activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" cofactor binding"},{"category":"Function","description":" pyridoxal phosphate binding"},{"category":"Function","description":" carbon-sulfur lyase activity"},{"category":"Process","description":" sulfur amino acid metabolic process"},{"category":"Process","description":" sulfur amino acid biosynthetic process"},{"category":"Process","description":" methionine biosynthetic process"},{"category":"Process","description":" L-methionine biosynthetic process"},{"category":"Process","description":" 'de novo' L-methionine biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"}],"pfams":[{"name":"Cys_Met_Meta_PP","identifier":"PF01053"}],"pathways":[{"name":"Cysteine and methionine metabolism","kegg_map_id":"00270"},{"name":"Selenocompound metabolism","kegg_map_id":"00450"},{"name":"Nitrogen metabolism","kegg_map_id":"00910"},{"name":"Sulfur metabolism","kegg_map_id":"00920"},{"name":"Cysteine 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Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" hydrolase activity"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines"},{"category":"Function","description":" deaminase activity"},{"category":"Function","description":" AMP deaminase activity"},{"category":"Process","description":" purine ribonucleoside monophosphate biosynthetic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular aromatic compound metabolic process"},{"category":"Process","description":" nucleobase metabolic process"},{"category":"Process","description":" purine base metabolic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" nitrogen compound metabolic process"},{"category":"Process","description":" cellular nitrogen compound metabolic process"},{"category":"Process","description":" nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"},{"category":"Process","description":" nucleobase, nucleoside and nucleotide metabolic process"},{"category":"Process","description":" nucleoside phosphate metabolic process"},{"category":"Process","description":" nucleotide metabolic process"},{"category":"Process","description":" purine nucleotide metabolic process"},{"category":"Process","description":" purine nucleotide biosynthetic process"},{"category":"Process","description":" purine nucleoside monophosphate biosynthetic process"}],"pfams":[{"name":"A_deaminase","identifier":"PF00962"}],"pathways":[{"name":"Purine 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protein RIB2","uniprot_id":"Q12362","uniprot_name":"RIB2_YEAST","enzyme":true,"transporter":false,"gene_name":"RIB2","num_residues":591,"molecular_weight":"67035.29688","theoretical_pi":"6.51","general_function":"Involved in zinc ion binding","specific_function":"Involved in riboflavin biosynthesis. Converts 2,5- diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate into 5- amino-6-(ribosylamino)-2,4(1H,3H)-pyrimidinedione 5'-phosphate","reactions":[{"id":1137,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2520,"direction":"\u003e","locations":"Cytoplasm;Nucleus. Mitochondrion;Nucleus","altext":"tRNA uridine = tRNA pseudouridine.","export":false,"pw_reaction_id":null,"source":null},{"id":2521,"direction":"\u003e","locations":"Cytoplasm","altext":"2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine + H(2)O = 5-amino-6-(5-phosphoribosylamino)uracil + NH(3).","export":false,"pw_reaction_id":null,"source":null},{"id":14110,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006541","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm","genbank_gene_id":"Z21618","genbank_protein_id":"642221","gene_card_id":"RIB2","chromosome_location":"chromosome 15","locus":"YOL066C","synonyms":["tRNA pseudouridine synthase 8, cytoplasmic","tRNA pseudouridylate synthase 8","tRNA-uridine isomerase 8","Diaminohydroxyphosphoribosylaminopyrimidine deaminase","DRAP deaminase","Riboflavin-specific deaminase"],"enzyme_classes":["5.4.99.-","3.5.4.26"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" zinc ion binding"},{"category":"Function","description":" hydrolase activity"},{"category":"Function","description":" isomerase activity"},{"category":"Function","description":" intramolecular transferase activity"},{"category":"Function","description":" nucleic acid binding"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" pseudouridine synthase activity"},{"category":"Function","description":" RNA binding"},{"category":"Function","description":" binding"},{"category":"Function","description":" ion binding"},{"category":"Function","description":" cation binding"},{"category":"Function","description":" metal ion binding"},{"category":"Function","description":" transition metal ion binding"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" macromolecule metabolic process"},{"category":"Process","description":" RNA modification"},{"category":"Process","description":" pseudouridine synthesis"},{"category":"Process","description":" cellular macromolecule metabolic process"},{"category":"Process","description":" RNA metabolic process"}],"pfams":[{"name":"dCMP_cyt_deam_1","identifier":"PF00383"},{"name":"PseudoU_synth_2","identifier":"PF00849"}],"pathways":[{"name":"Riboflavin 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cystathionine beta-lyase","uniprot_id":"P43623","uniprot_name":"METC_YEAST","enzyme":true,"transporter":false,"gene_name":"IRC7","num_residues":340,"molecular_weight":"36971.10156","theoretical_pi":"6.05","general_function":"Involved in pyridoxal phosphate binding","specific_function":"L-cystathionine + H(2)O = L-homocysteine + NH(3) + pyruvate","reactions":[{"id":1418,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2518,"direction":"\u003e","locations":"Cytoplasm. 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binding"},{"category":"Function","description":" carbon-sulfur lyase activity"},{"category":"Function","description":" cystathionine beta-lyase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" lyase activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" cofactor binding"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular amino acid and derivative metabolic process"},{"category":"Process","description":" cellular amino acid metabolic process"}],"pfams":[{"name":"Cys_Met_Meta_PP","identifier":"PF01053"}],"pathways":[{"name":"Cysteine and methionine metabolism","kegg_map_id":"00270"},{"name":"Selenocompound metabolism","kegg_map_id":"00450"},{"name":"Nitrogen metabolism","kegg_map_id":"00910"},{"name":"Sulfur metabolism","kegg_map_id":"00920"},{"name":"Cysteine Metabolism","kegg_map_id":null},{"name":"Methionine metabolism and salvage","kegg_map_id":null}],"gene_sequence":"ATGTCTACAGACAAGATCACATTTTTGTTGAACTGGCAACCAACCCCATACCATATTCCAATTTTCTTGGCTCAAACCAAAGGTTACTTCAAGGAGCAAGGTCTAGACATGGCCATCCTAGAACCAACCAATCCTTCCGATGTCACTGAGTTAATTGGATCTGGTAAGGTCGACATGGGTTTGAAAGCCATGATCCACACCTTGGCTGCCAAGGCCCGTGGTTTCCCAGTGACCTCTGTTGCCTCTTTGTTGGACGAACCATTTACCGGTGTCTTGTACTTAAAGGGCAGTGGTATCACTGAAGACTTCCAGTCCCTAAAGGGTAAGAAGATCGGTTACGTTGGTGAATTCGGTAAGATCCAAATCGATGAATTGACCAAGCACTACGGTATGAAGCCAGAAGACTACACCGCCGTCAGATGTGGTATGAATGTCGCCAAGTACATCATCGAAGGTAAGATTGATGCCGGTATTGGTATCGAATGTATGCAACAAGTCGAATTGGAAGAGTACTTGGCCAAGCAAGGCAGACCAGCTTCTGATGCTAAAATGTTGAGAATTGACAAGTTGGCTTGCTTGGGTTGCTGTTGCTTCTGTACCGTTCTTTACATCTGCAACGATGAATTTTTGAAGAAGAACCCTGAAAAGGTCAGAAAGTTCTTGAAAGCCATCAAGAAGGCAACCGACTACGTTCTAGCCGACCCTGTGAAGGCTTGGAAAGAATACATCGACTTCAAGCCTCAATTGAACAACGATCTATCCTACAAGCAATACCAAAGATGTTACGCTTACTTCTCTTCATCTTTGTACAATGTTCACCGTGACTGGAAGAAGGTTACCGGTTACGGTAAGAGATTAGCCATCTTGCCACCAGACTATGTCTCGAACTACACTAATGAATACTTGTCCTGGCCAGAACCAGAAGAGGTTTCTGATCCTTTGGAAGCTCAAAGATTGATGGCTATTCATCAAGAAAAATGCAGACAGGAAGGTACTTTCAAGAGATTGGCTCTTCCAGCTTAA","protein_sequence":"MIDRTELSKFGITTQLSVIGRNPDEQSGFVNPPLYKGSTIILKKLSDLEQRKGRFYGTAGSPTIDNLENAWTHLTGGAGTVLSASGLGSISLALLALSKAGDHILMTDSVYVPTRMLCDGLLAKFGVETDYYDPSIGKDIEKLVKPNTTVIFLESPGSGTMEVQDIPALVSVAKKHGIKTILDNTWATPLFFDAHAHGIDISVEAGTKYLGGHSDLLIGLASANEECWPLLRSTYDAMAMLPGAEDCQLALRGMRTLHLRLKEVERKALDLAAWLGNRDEVEKVLHPAFEDCPGHEYWVRDYKGSSGLFSIVLKNGFTRAGLEKMVEGMKVLQLGFSWGG"},{"created_at":"2011-05-26T18:17:59.000Z","updated_at":"2011-07-22T17:54:35.000Z","name":"Deoxycytidylate deaminase","uniprot_id":"P06773","uniprot_name":"DCTD_YEAST","enzyme":true,"transporter":false,"gene_name":"DCD1","num_residues":312,"molecular_weight":"35645.69922","theoretical_pi":"7.95","general_function":"Involved in zinc ion binding","specific_function":"Supplies the nucleotide substrate for thymidylate synthetase","reactions":[{"id":1438,"direction":"\u003c\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1439,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2522,"direction":"\u003e","locations":"Cytoplasmic","altext":"dCMP + H(2)O = dUMP + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasmic","genbank_gene_id":"M13010","genbank_protein_id":"171384","gene_card_id":"DCD1","chromosome_location":"chromosome 8","locus":"YHR144C","synonyms":["dCMP deaminase"],"enzyme_classes":["3.5.4.12"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" ion binding"},{"category":"Function","description":" cation binding"},{"category":"Function","description":" metal ion binding"},{"category":"Function","description":" transition metal ion binding"},{"category":"Function","description":" zinc ion binding"},{"category":"Function","description":" hydrolase activity"},{"category":"Process","description":" Not Available"}],"pfams":[{"name":"dCMP_cyt_deam_1","identifier":"PF00383"}],"pathways":[{"name":"Pyrimidine 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amidase","uniprot_id":"P22580","uniprot_name":"AMDY_YEAST","enzyme":true,"transporter":false,"gene_name":"AMD2","num_residues":549,"molecular_weight":"61409.5","theoretical_pi":"5.07","general_function":"Involved in carbon-nitrogen ligase activity, with glutamine as amido-N-donor","specific_function":"A monocarboxylic acid amide + H(2)O = a monocarboxylate + NH(3)","reactions":[{"id":2523,"direction":"\u003e","locations":null,"altext":"A monocarboxylic acid amide + H(2)O = a monocarboxylate + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":"AY723784","genbank_protein_id":"51830255","gene_card_id":"AMD2","chromosome_location":"chromosome 4","locus":"YDR242W","synonyms":[],"enzyme_classes":["3.5.1.4"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" ligase activity"},{"category":"Function","description":" ligase activity, forming carbon-nitrogen bonds"},{"category":"Function","description":" carbon-nitrogen ligase activity, with glutamine as amido-N-donor"},{"category":"Process","description":" Not Available"}],"pfams":[{"name":"Amidase","identifier":"PF01425"}],"pathways":[{"name":"Arginine and proline metabolism","kegg_map_id":"00330"},{"name":"Phenylalanine metabolism","kegg_map_id":"00360"},{"name":"Tryptophan metabolism","kegg_map_id":"00380"},{"name":"Cyanoamino acid metabolism","kegg_map_id":"00460"}],"gene_sequence":"ATGACTGTGCACTCAACGTGGAAGGAAAAAGTTCAATTAAAAAAAGATCAACTGAACAGTAAGATAAAAGACGAATGGAAATTAAACAGCACAACTATAACGAGGTTGAAGAACGATAAAAAAAATTTAATCAAGAATATCGATGATTTATGCTCATCTTCAGAAAATCAGATCACCCACTCCACGATTATGGCCTTGAGACAGGCACTGGAAGCAAAAGAGTTAAGCTGCCATGAAATAACAGCTGCATTTTGTCATAGGGCTGCTTTAATTCATCAAGTAGTGAATTGTCTATCCGAAATCATGTTTTCAGAGGCATTGAGATTGGCTGACTATTACGACAGCAATAGACCAGCCATATTGCCACCCTTGTACGGTATACCGATATCTCTCAAAGACCAATGTAACGTTGAGGGTGTAGACACCTCACTGGGTTATTTATGTCGAACTTTCAAACCAAAAACCAAGAATGAAGAATCATTGATTGTCAGTTTTCTGAGAGATTTAGGAGCTATTATATTTGTAAAAACCACCGTACCTTCATCGATGATGGCTACAGATACACAATCTAACACCTTTGGGTACACATATAATAGTATTAATTTAAGCTTCTCCAGTGGTGGATCTTCTGGTGGAGAGGGTTCGTTAATTGGTGCTCATGGTTCCTTGCTGGGACTAGGAACTGATATAGGCGGAAGCATCAGAATTCCTAGTAGTTACCAAGGATTATTTGGTTTGAAACCAACTTTTGGACGCGTCCCTTACTTGAGGGTGGATAATTCATTTGAGGGAAGGGAAACAATTCCCAGTGTAATTGGGCCGTTGGCAAGAGATCTTTCGGATTTGAGATACTTCATGAGTTGCGTTATCAACATCTGTCAACCATGGGTACAAGACGTCAAGTGTATTCCATACCATTTTGATTCCTCTACAAGTAAATTACACGATAATTATGTTGTTGGAATATGGTATGGTGACGGCGTTATTGATCCTCCGCCCAGTGACATCAGGGCTTTAAAGACGTGCGAAGACCTAGTCAATAAAACTAAAGGAATGAAGGCAGTTAAATGGGAGCCTTCCAGTGAACTGAGCAGGGAATTGTTTGATCTCGCAAATGAAGCAGATGTTGCTGACTCAGGTAACGAGATAAAAAACGAATTCGAAATTTCCGGAGAACCACTCCTAGATATTTTAAAACCAATGGTTTTGGAAAACGGAAGGCCCCCATATACTGTTAATGAATGGTGGGATTTGACCAAAAGAGTTTATAATGCACAACAATTAATGAGAGATTATTACCTTTCTTTCCCGGAATCAGAAAGGCCTGATGTTATCATATCTCCTACAACGCTGATGCCATTTAGGCCTGGTGACATGCTAAAGACAACTTTACGATACATTTTACTATTCAACGTTTTAAATTTCCCATCATTATCTATACCTGTAGGTAGTGTCGATTGCCAAATTGATGGGCTAATGGATACCACTTCTGCGCTCAATCCAGAAGATAAAATGATCAAAACATATTGGAATGATTTAATACAATCTGGTGAGATAGATGGGTTTCCAATAGGCCTACAAGTAGTTAGCCCGACTTTCAATGACAATGAAGTTTGTAAATTTGCGTCTTGGCTTTTTAGCAAAATATAG","protein_sequence":"MTVHSTWKEKVQLKKDQLNSKIKDEWKLNSTTITRLKNDKKNLIKNIDDLCSSSENQITHSTIMALRQALEAKELSCHEITAAFCHRAALIHQVVNCLSEIMFSEALRLADYYDSNRPAILPPLYGIPISLKDQCNVEGVDTSLGYLCRTFKPKTKNEESLIVSFLRDLGAIIFVKTTVPSSMMATDTQSNTFGYTYNSINLSFSSGGSSGGEGSLIGAHGSLLGLGTDIGGSIRIPSSYQGLFGLKPTFGRVPYLRVDNSFEGRETIPSVIGPLARDLSDLRYFMSCVINICQPWVQDVKCIPYHFDSSTSKLHDNYVVGIWYGDGVIDPPPSDIRALKTCEDLVNKTKGMKAVKWEPSSELSRELFDLANEADVADSGNEIKNEFEISGEPLLDILKPMVLENGRPPYTVNEWWDLTKRVYNAQQLMRDYYLSFPESERPDVIISPTTLMPFRPGDMLKTTLRYILLFNVLNFPSLSIPVGSVDCQIDGLMDTTSALNPEDKMIKTYWNDLIQSGEIDGFPIGLQVVSPTFNDNEVCKFASWLFSKI"},{"created_at":"2011-05-26T18:19:01.000Z","updated_at":"2011-05-27T15:01:04.000Z","name":"Probable guanine deaminase","uniprot_id":"Q07729","uniprot_name":"GUAD_YEAST","enzyme":true,"transporter":false,"gene_name":"GUD1","num_residues":489,"molecular_weight":"55203.19922","theoretical_pi":"5.9","general_function":"Involved in hydrolase activity","specific_function":"Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia","reactions":[{"id":1619,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2524,"direction":"\u003e","locations":"Cytoplasmic","altext":"Guanine + H(2)O = xanthine + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasmic","genbank_gene_id":"Z74286","genbank_protein_id":"1431404","gene_card_id":"GUD1","chromosome_location":"chromosome 4","locus":"YDL238C","synonyms":["Guanase","Guanine aminase","Guanine aminohydrolase","GAH"],"enzyme_classes":["3.5.4.3"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines"},{"category":"Function","description":" guanine deaminase activity"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" binding"},{"category":"Function","description":" ion binding"},{"category":"Function","description":" cation binding"},{"category":"Function","description":" metal ion binding"},{"category":"Function","description":" transition metal ion binding"},{"category":"Function","description":" zinc ion binding"},{"category":"Function","description":" hydrolase activity"},{"category":"Function","description":" hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds"},{"category":"Process","description":" Not Available"}],"pfams":[{"name":"Amidohydro_1","identifier":"PF01979"}],"pathways":[{"name":"Purine metabolism","kegg_map_id":"00230"}],"gene_sequence":"ATGACAAAAAGTGATTTATTATTTGATAAATTCAACGACAAACATGGAAAGTTTCTAGTTTTTTTTGGTACCTTTGTAGATACCCCTAAATTAGGAGAGCTGAGAATCAGAGAGAAAACATCTGTTGGAGTTCTCAACGGAATCATCAGGTTTGTGAACAGAAATTCACTCGATCCTGTCAAAGATTGTTTAGATCACGATAGTAGCTTATCACCAGAGGATGTCACGGTGGTTGACATAATTGGAAAAGACAAGACTCGAAATAACAGCTTTTATTTTCCAGGTTTTGTTGACACGCATAACCATGTCTCGCAATATCCAAATGTCGGCGTATTTGGGAATTCTACCCTGCTGGATTGGCTAGAGAAGTATACCTTCCCCATAGAAGCCGCACTAGCAAACGAAAATATTGCGAGAGAAGTTTACAATAAGGTAATAAGTAAGACGCTTTCTCACGGTACAACGACTGTGGCTTACTATAATACCATTGATCTCAAGTCCACTAAGCTCTTGGCTCAACTAAGCTCCTTATTGGGGCAGCGTGTTCTTGTTGGAAAAGTGTGCATGGATACCAATGGTCCCGAGTATTATATTGAAGATACTAAAACTTCCTTTGAAAGCACTGTGAAAGTTGTTAAGTACATACGGGAAACCATTTGTGATCCCCTCGTAAATCCTATAGTGACACCAAGGTTCGCGCCCTCTTGTTCTAGAGAACTAATGCAACAGTTGTCCAAGCTAGTCAAGGATGAAAACATACACGTTCAAACCCACTTGTCGGAAAATAAGGAGGAGATACAGTGGGTTCAAGATTTATTTCCCGAATGTGAGAGCTATACTGATGTATACGACAAATATGGGCTGCTCACAGAAAAAACAGTATTGGCACATTGTATTCATCTAACAGATGCCGAAGCGCGTGTGATTAAACAGCGTCGCTGTGGTATATCTCATTGTCCCATTTCCAACTCCTCTCTGACTTCTGGAGAGTGTAGGGTTCGATGGTTGCTGGACCAGGGCATAAAGGTTGGTCTAGGCACCGACGTTTCAGCCGGTCATTCTTGTAGCATACTCACCACCGGAAGGCAGGCCTTTGCAGTTTCAAGGCATTTGGCAATGAGAGAAACTGATCATGCAAAACTTTCAGTCTCCGAGTGCCTATTTCTTGCTACAATGGGCGGAGCACAAGTCTTGCGTATGGATGAGACCTTGGGGACTTTTGACGTCGGTAAGCAGTTTGACGCTCAAATGATCGATACCAATGCTCCCGGCTCAAACGTGGATATGTTTCATTGGCAGCTAAAGGAGAAGGATCAAATGCAAGAGCAAGAGCAAGAGCAAGGGCAAGACCCTTATAAGAACCCACCGCTGCTTACTAATGAAGACATAATCGCAAAATGGTTCTTTAACGGTGATGATCGCAACACCACTAAAGTTTGGGTAGCCGGCCAGCAAGTCTACCAGATTTAG","protein_sequence":"MTKSDLLFDKFNDKHGKFLVFFGTFVDTPKLGELRIREKTSVGVLNGIIRFVNRNSLDPVKDCLDHDSSLSPEDVTVVDIIGKDKTRNNSFYFPGFVDTHNHVSQYPNVGVFGNSTLLDWLEKYTFPIEAALANENIAREVYNKVISKTLSHGTTTVAYYNTIDLKSTKLLAQLSSLLGQRVLVGKVCMDTNGPEYYIEDTKTSFESTVKVVKYIRETICDPLVNPIVTPRFAPSCSRELMQQLSKLVKDENIHVQTHLSENKEEIQWVQDLFPECESYTDVYDKYGLLTEKTVLAHCIHLTDAEARVIKQRRCGISHCPISNSSLTSGECRVRWLLDQGIKVGLGTDVSAGHSCSILTTGRQAFAVSRHLAMRETDHAKLSVSECLFLATMGGAQVLRMDETLGTFDVGKQFDAQMIDTNAPGSNVDMFHWQLKEKDQMQEQEQEQGQDPYKNPPLLTNEDIIAKWFFNGDDRNTTKVWVAGQQVYQI"},{"created_at":"2011-05-26T19:25:57.000Z","updated_at":"2011-05-27T15:01:06.000Z","name":"Fumarate hydratase, mitochondrial","uniprot_id":"P08417","uniprot_name":"FUMH_YEAST","enzyme":true,"transporter":false,"gene_name":"FUM1","num_residues":488,"molecular_weight":"53151.5","theoretical_pi":"8.4","general_function":"Involved in fumarate hydratase activity","specific_function":"(S)-malate = fumarate + H(2)O","reactions":[{"id":1553,"direction":"\u003c\u003e","locations":"mitochondrion;cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2565,"direction":"\u003e","locations":"Mitochondrion matrix. Cytoplasm.","altext":"(S)-malate = fumarate + H(2)O.","export":false,"pw_reaction_id":null,"source":null},{"id":3702,"direction":"\u003c\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R003284","source":"Smpdb"},{"id":3733,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R006259","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1YFM","cellular_location":"Mitochondrion matrix. Cytoplasm.","genbank_gene_id":"J02802","genbank_protein_id":"171523","gene_card_id":"FUM1","chromosome_location":"chromosome 16","locus":"YPL262W","synonyms":["Fumarase"],"enzyme_classes":["4.2.1.2"],"go_classes":[{"category":"Component","description":" macromolecular complex"},{"category":"Component","description":" protein complex"},{"category":"Component","description":" tricarboxylic acid cycle enzyme complex"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" fumarate hydratase activity"},{"category":"Function","description":" lyase activity"},{"category":"Function","description":" carbon-oxygen lyase activity"},{"category":"Function","description":" hydro-lyase activity"},{"category":"Process","description":" organic acid metabolic process"},{"category":"Process","description":" oxoacid metabolic process"},{"category":"Process","description":" carboxylic acid metabolic process"},{"category":"Process","description":" dicarboxylic acid metabolic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" fumarate metabolic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cofactor metabolic process"},{"category":"Process","description":" coenzyme metabolic process"},{"category":"Process","description":" acetyl-CoA metabolic process"},{"category":"Process","description":" acetyl-CoA catabolic process"},{"category":"Process","description":" tricarboxylic acid cycle"}],"pfams":[{"name":"Lyase_1","identifier":"PF00206"},{"name":"FumaraseC_C","identifier":"PF10415"}],"pathways":[{"name":"Citrate cycle (TCA cycle)","kegg_map_id":"00020"},{"name":"Citric Acid Cycle 1434561204","kegg_map_id":null},{"name":"TCA Cycle","kegg_map_id":null}],"gene_sequence":"ATGTTGAGATTTACCAATTGTAGTTGCAAGACTTTCGTAAAATCGTCATATAAGCTTAATATAAGAAGAATGAACTCCTCGTTCAGAACTGAAACCGATGCATTTGGTGAGATACACGTGCCTGCTGATAAGTACTGGGGTGCCCAAACTCAAAGATCCTTTCAAAACTTCAAGATTGGTGGCGCTCGTGAAAGAATGCCATTGCCTTTGGTGCATGCATTTGGTGTTTTGAAGAAATCTGCCGCGATTGTGAATGAGTCTCTGGGGGGATTGGATCCCAAGATCTCCAAGGCTATTCAACAGGCCGCTGACGAAGTGGCTTCTGGTAAGCTAGACGACCACTTTCCATTGGTTGTTTTCCAAACGGGTTCCGGTACCCAGTCTAACATGAACGCTAATGAAGTTATTTCCAATCGTGCCATTGAGATCCTAGGAGGCAAGATTGGATCTAAACAAGTCCATCCAAACAATCATTGCAACCAATCTCAATCATCCAATGATACTTTCCCCACTGTCGTGCATATCGCTGCCAGTTTGCAAATTCAAAACGAGTTGATACCTGAGTTGACCAATTTAAAGAACGCCCTTGAAGCCAAATCCAAGGAATTTGACCATATTGTGAAGATCGGTAGAACACACTTGCAAGATGCCACGCCTTTGACACTAGGTCAAGAGTTTTCCGGTTACGTGCAACAAGTTGAGAACGGTATCCAAAGAGTGGCACATTCTTTGAAAACATTGAGTTTCCTGGCACAAGGTGGTACTGCCGTTGGTACAGGGTTGAACACCAAGCCCGGATTCGATGTCAAGATAGCCGAGCAAATTTCCAAAGAAACTGGACTAAAGTTTCAAACCGCCCCTAATAGGTTCGAGGCTTTGGCTGCTCACGACGCCATTGTCGAATGTAGCGGTGCTCTAAACACCCTTGCTTGTTCTCTTTTCAAAATAGCGCAAGATATAAGATACTTAGGGTCCGGGCCACGTTGCGGCTACCATGAACTAATGCTGCCAGAGAATGAACCAGGTTCCTCAATCATGCCTGGTAAAGTTAACCCAACCCAAAACGAGGCATTGACTCAAGTGTGTGTGCAAGTCATGGGTAACAATGCAGCTATCACGTTTGCCGGCTCTCAAGGTCAATTCGAGTTAAATGTCTTCAAGCCAGTCATGATCGTCAATCTATTGAATTCGATCAGGTTAATTACTGATGCCGCATATTCATTTAGAGTGCACTGTGTTGAAGGTATCAAAGCCAATGAGCCTCGTATTCATGAGTTGTTGACTAAATCTTTAATGTTAGTCACCGCTTTGAACCCTAAGATCGGTTATGATGCCGCTTCCAAGGTCGCCAAGAATGCTCATAAGAAGGGCATTACCTTGAAGGAAAGTGCATTGGAATTGGGTGTATTGACTGAAAAGGAATTTGATGAATGGGTTGTTCCTGAACACATGCTAGGTCCTAAATAA","protein_sequence":"MLRFTNCSCKTFVKSSYKLNIRRMNSSFRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNTKPGFDVKIAEQISKETGLKFQTAPNKFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHMLGPK"},{"created_at":"2011-05-29T03:30:17.000Z","updated_at":"2011-05-29T05:06:53.000Z","name":"D-serine dehydratase","uniprot_id":"P53095","uniprot_name":"DSD1_YEAST","enzyme":true,"transporter":false,"gene_name":"DSD1","num_residues":428,"molecular_weight":"47827.39844","theoretical_pi":"7.64","general_function":"Involved in D-serine ammonia-lyase activity","specific_function":"Converts specifically D-serine to pyruvate and ammonia. May play a role in D-serine detoxification","reactions":[{"id":2838,"direction":"\u003e","locations":null,"altext":"D-serine = pyruvate + NH(3).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":null,"genbank_protein_id":null,"gene_card_id":"DSD1","chromosome_location":"chromosome 7","locus":"YGL196W","synonyms":["D-serine deaminase","DSD"],"enzyme_classes":["4.3.1.18"],"go_classes":[],"pfams":[{"name":"Ala_racemase_N","identifier":"PF01168"}],"pathways":[{"name":"Glycine, serine and threonine metabolism","kegg_map_id":"00260"}],"gene_sequence":"ATGAGCGATGTTCTATCTCAATATAAAGGGTGCTCAGTCAGAGATTTACCCACACCCAATTTCGTTATTAATGAAGAAAAATTTGATAAGAATTGTACGACAATGTTGAACAACGTTGAAAAGCTCAGCCAGGAATGTGGCGTACCAATCAAATTTCGTGCACACGTAAAAACGCATAAGACAGCAAAGGGAACTTTGAAACAATTGGGCCACGGACTTCCATTGGCTAAACGCACTACAAGAGCCATATTAGTATCAACTTTGAAAGAAGCAGAAGAACTTCTTAATTATCAAGATAGACAATGTTCGGATTATATTGACGATATAACATATAGTTTACCCTGTTGCGTTCCAGAGTTTATTCCTCTTTTGAGCAATTTGTCAAGAAGGGTGAATAATTTTCAGGTTTTTGTTGATAACATTGAACACTTGGAGAATTTAAAGAATTTCGGTAGGCCTGCTTCCGGCAAGAAATGGTCGGTTTTTATCAAGGTTGATATGGGGACTAAGAGGGCAGGTCTTGCTTTCGACTCTCCAGAATTTTTGAGTCTTTTAAAAAAACTGACTTCCTCAGAAATTAAAGAAGTAATTGAGCCATATGGGTTTTATGCTCATGCCGGACACAGCTACTCTTCAACCTCGATCAACGACACTCAGAATCTTTTGATGGAAGAAGTGAAAGCAGTCAATTCTGCCGCTAAAGTTTTGTGCTCTGTGGATCCTCAGTTTGATCCTTCTAAATTAACACTTTCTGTGGGCGCTACTCCGACTTCCAATTCTTTGAAACTCGATAATAAAAGTACCCTTGTTAAATTCATTACTACTCAATTAGTTAGTACGCTTGAAATCCACTGCGGTAATTACTGCATGTATGACCTGCAACAGGTGGCAACAGGCTGTGTCCAAGATCACGAATTGTCTGGTTTTGTATTAGGAACAGTACTATCATCTTACCCTTCTAGAGGTGAATTGTTGAGTAATACAGGTGTAATGTGTCTAACGCGAGAAGCATCCTCAATAAAAGGGTTTGGAATATGTGCTGATTTGGAACATGTGTTAAAATCCGAGAGTTTCAGTAGGGAATGGTATGTAGCAAGGGTCTCTCAAGAACACGGGATACTGAGGCCAATAAGAAACTGGAACGAAACTACTCCATTAAAATTAGGCAGCAAAATTGCCGTCCTTCCTCAACACGCTTGTATCACAATGGGACAATTTCCATATTATTTCGTGGTAAACAGCGAAGGCATTGTCAACGATGTTTGGTTACCTTTTCAGAAATGGTAA","protein_sequence":"MSDVLSQYKGCSVRDLPTPNFVINEEKFDKNCTTMLNNVEKLSQECGVPIKFRAHVKTHKTAKGTLKQLGHGLPLAKRTTRAILVSTLKEAEELLNYQDRQCSDYIDDITYSLPCCVPEFIPLLSNLSRRVNNFQVFVDNIEHLENLKNFGRPASGKKWSVFIKVDMGTKRAGLAFDSPEFLSLLKKLTSSEIKEVIEPYGFYAHAGHSYSSTSINDTQNLLMEEVKAVNSAAKVLCSVDPQFDPSKLTLSVGATPTSNSLKLDNKSTLVKFITTQLVSTLEIHCGNYCMYDLQQVATGCVQDHELSGFVLGTVLSSYPSRGELLSNTGVMCLTREASSIKGFGICADLEHVLKSESFSREWYVARVSQEHGILRPIRNWNETTPLKLGSKIAVLPQHACITMGQFPYYFVVNSEGIVNDVWLPFQKW"}]}