{"ymdb_id":"YMDB00049","created_at":"2011-05-29T15:51:48.000Z","updated_at":"2016-09-08T18:34:57.000Z","name":"Uridine 5'-monophosphate","cas":"58-97-9","state":"Solid","melting_point":"202 oC","description":"Uridine 5'-monophosphate (UMP) is a uracil nucleotide found in RNA. It is an ester of phosphoric acid with the nucleoside uridine. Uridine-5'-phosphate (UMP) is a pyrimidine used for the de novo biosynthesis of pyrimidine nucleotides. [Biocyc PWY-5686 and PWY-5687]","experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":"mitochondrion;nucleus;cytoplasm","synthesis_reference":"Wang Xing; Wang Xiuwen; Yin Mengxin; Xiao Zijun; Ma Cuiqing; Lin Zhixin; Wang Peng George; Xu Ping  Production of uridine 5'-monophosphate by Corynebacterium ammoniagenes ATCC 6872 using a statistically improved biocatalytic process.    Applied microbiolo","chebi_id":"16695","hmdb_id":"HMDB00288","kegg_id":"C00105","pubchem_id":"6030","cs_id":"5808","foodb_id":null,"wikipedia_link":"Uridine_monophosphate","biocyc_id":"UMP","iupac":"{[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acid","traditional_iupac":"uridine monophosphate","logp":"-2.538808173","pka":"6.251166930280792","alogps_solubility":"1.20e+01 g/l","alogps_logp":"-1.76","alogps_logs":"-1.43","acceptor_count":"8","donor_count":"5","rotatable_bond_count":"4","polar_surface_area":"165.85999999999999","refractivity":"63.4385","polarizability":"26.295980635705423","formal_charge":"0","physiological_charge":"-2","pka_strongest_basic":"-3.6645431498421583","pka_strongest_acidic":"1.2255024716430984","bioavailability":"1","number_of_rings":"2","rule_of_five":"1","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"0","synonyms":["5'-Monophosphate, uridine","5'-UMP","5'Uridylate","5'Uridylic acid","Acid, uridylic","Acids, uridylic","Monophosphate, uridine","pU","UMP","Uridine 5' monophosphate","Uridine 5'-(dihydrogen phosphate)","Uridine 5'-(dihydrogen phosphoric acid)","Uridine 5'-monophosphate","Uridine 5'-monophosphic acid","Uridine 5'-monophosphoric acid","Uridine 5'-phosphate","Uridine 5'-phosphorate","Uridine 5'-phosphoric acid","Uridine mono(dihydrogen phosphate)","Uridine monophosphate","Uridine monophosphoric acid","Uridine phosphate","Uridine-5'-monophosphate","URIDINE-5'-monophosphoric acid","Uridylate","Uridylic acid","Uridylic acids"],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"},{"name":"N-Glycan biosynthesis","kegg_map_id":"00510"}],"growth_conditions":[],"references":[{"pubmed_id":21051339,"citation":"UniProt Consortium (2011). \"Ongoing and future developments at the Universal Protein Resource.\" Nucleic Acids Res 39:D214-D219."},{"pubmed_id":21062828,"citation":"Scheer, M., Grote, A., Chang, A., Schomburg, I., Munaretto, C., Rother, M., Sohngen, C., Stelzer, M., Thiele, J., Schomburg, D. (2011). \"BRENDA, the enzyme information system in 2011.\" Nucleic Acids Res 39:D670-D676."},{"pubmed_id":18846089,"citation":"Herrgard, M. J., Swainston, N., Dobson, P., Dunn, W. B., Arga, K. Y., Arvas, M., Bluthgen, N., Borger, S., Costenoble, R., Heinemann, M., Hucka, M., Le Novere, N., Li, P., Liebermeister, W., Mo, M. L., Oliveira, A. P., Petranovic, D., Pettifer, S., Simeonidis, E., Smallbone, K., Spasic, I., Weichart, D., Brent, R., Broomhead, D. S., Westerhoff, H. V., Kirdar, B., Penttila, M., Klipp, E., Palsson, B. O., Sauer, U., Oliver, S. G., Mendes, P., Nielsen, J., Kell, D. B. (2008). \"A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology.\" Nat Biotechnol 26:1155-1160."},{"pubmed_id":7006681,"citation":"Levine, H. L., Brody, R. S., Westheimer, F. H. (1980). \"Inhibition of orotidine-5'-phosphate decarboxylase by 1-(5'-phospho-beta-d-ribofuranosyl)barbituric acid, 6-azauridine 5'-phosphate, and uridine 5'-phosphate.\" Biochemistry 19:4993-4999."},{"pubmed_id":10501935,"citation":"Kurtz, J. E., Exinger, F., Erbs, P., Jund, R. (1999). \"New insights into the pyrimidine salvage pathway of Saccharomyces cerevisiae: requirement of six genes for cytidine metabolism.\" Curr Genet 36:130-136."},{"pubmed_id":18687109,"citation":"Nookaew, I., Jewett, M. C., Meechai, A., Thammarongtham, C., Laoteng, K., Cheevadhanarak, S., Nielsen, J., Bhumiratana, S. (2008). \"The genome-scale metabolic model iIN800 of Saccharomyces cerevisiae and its validation: a scaffold to query lipid metabolism.\" BMC Syst Biol 2:71."},{"pubmed_id":11934891,"citation":"Nakanishi, T., Sekimizu, K. (2002). \"SDT1/SSM1, a multicopy suppressor of S-II null mutant, encodes a novel pyrimidine 5'-nucleotidase.\" J Biol Chem 277:22103-22106."},{"pubmed_id":16194150,"citation":"Marobbio, C. M., Di Noia, M. A., Palmieri, F. (2006). \"Identification of a mitochondrial transporter for pyrimidine nucleotides in Saccharomyces cerevisiae: bacterial expression, reconstitution and functional characterization.\" Biochem J 393:441-446."},{"pubmed_id":10409709,"citation":"Gao, X. D., Kaigorodov, V., Jigami, Y. (1999). \"YND1, a homologue of GDA1, encodes membrane-bound apyrase required for Golgi N- and O-glycosylation in Saccharomyces cerevisiae.\" J Biol Chem 274:21450-21456."}],"proteins":[{"created_at":"2011-05-24T19:20:17.000Z","updated_at":"2011-05-27T14:55:57.000Z","name":"UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase","uniprot_id":"P07286","uniprot_name":"GPT_YEAST","enzyme":true,"transporter":false,"gene_name":"ALG7","num_residues":448,"molecular_weight":"50367.39844","theoretical_pi":"8.51","general_function":"Involved in phospho-N-acetylmuramoyl-pentapeptide-transferase activity","specific_function":"Catalyzes the initial step in the synthesis of dolichol- P-P-oligosaccharides","reactions":[{"id":2247,"direction":"\u003e","locations":"Endoplasmic reticulum membrane; Multi-pass membrane protein","altext":"UDP-N-acetyl-D-glucosamine + dolichyl phosphate = UMP + N-acetyl-D-glucosaminyl-diphosphodolichol.","export":false,"pw_reaction_id":null,"source":null},{"id":14869,"direction":"\u003e","locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R007060","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"24-44;72-92;129-149;157-177;202-222;231-251;256-276;283-303;309-329;387-407;419-439","pdb_id":null,"cellular_location":"Endoplasmic reticulum membrane; Multi-pass membrane protein","genbank_gene_id":"Y00126","genbank_protein_id":"4685","gene_card_id":"ALG7","chromosome_location":"chromosome 2","locus":"YBR243C","synonyms":["GlcNAc-1-P transferase","G1PT","GPT","N-acetylglucosamine-1-phosphate transferase","Tunicamycin resistance protein 1"],"enzyme_classes":["2.7.8.15"],"go_classes":[{"category":"Component","description":" cell part"},{"category":"Component","description":" membrane part"},{"category":"Component","description":" intrinsic to membrane"},{"category":"Component","description":" integral to membrane"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" transferase activity, transferring phosphorus-containing groups"},{"category":"Function","description":" phosphotransferase activity, for other substituted phosphate groups"},{"category":"Function","description":" phospho-N-acetylmuramoyl-pentapeptide-transferase activity"},{"category":"Process","description":" Not Available"}],"pfams":[{"name":"Glycos_transf_4","identifier":"PF00953"}],"pathways":[{"name":"N-Glycan biosynthesis","kegg_map_id":"00510"}],"gene_sequence":"ATGTTGCGACTTTTTTCACTGGCACTTATCACATGCTTAATCTACTATTCCAAAAATCAGGGCCCATCTGCTCTTGTTGCGGCCGTGGGATTTGGTATAGCAGGCTATTTAGCTACAGATATGTTGATTCCACGTGTGGGCAAATCCTTCATCAAAATAGGCCTATTCGGTAAGGACTTGAGTAAACCTGGCCGTCCGGTGCTTCCAGAAACAATAGGTGCTATCCCTGCTGCAGTTTATTTATTTGTAATGTTCATTTACATTCCCTTCATTTTCTACAAGTATATGGTCATAACCACTTCAGGTGGGGGCCATCGCGATGTCTCAGTGGTTGAAGATAACGGTATGAATTCTAATATTTTTCCTCATGATAAACTATCTGAATATTTGAGCGCTATCCTATGCTTGGAAAGTACGGTCCTCTTGGGTATCGCTGATGATTTATTTGATTTACGTTGGAGACATAAGTTTTTCTTGCCTGCCATTGCAGCCATCCCACTGCTAATGGTTTATTATGTGGATTTTGGAGTTACGCATGTACTTATTCCCGGATTCATGGAACGCTGGTTGAAAAAGACTAGTGTTGATTTGGGGCTGTGGTATTATGTTTATATGGCATCGATGGCAATTTTTTGCCCCAACTCCATCAACATCCTGGCAGGTGTTAATGGTTTAGAGGTTGGCCAATGTATAGTGTTGGCCATCTTAGCGCTATTGAACGATTTGCTGTACTTCTCGATGGGGCCATTAGCCACAAGAGACTCCCATAGGTTTTCCGCTGTTTTGATTATCCCATTTTTGGGTGTATCCTTGGCGCTATGGAAATGGAATCGTTGGCCCGCCACAGTGTTTGTGGGAGATACATATTGTTATTTCGCTGGAATGGTATTCGCAGTCGTTGGTATACTGGGTCATTTTTCAAAGACGATGCTTTTGCTATTCATTCCTCAAATCGTTAATTTTATTTATTCATGTCCTCAGCTATTCAAATTGGTCCCCTGCCCGAGACATAGGTTACCTAAATTTAATGAAAAAGACGGTTTAATGTATCCATCAAGAGCAAACTTAAAAGAAGAACCGCCAAAGAGCATTTTTAAACCGATCTTGAAGTTACTATACTGTCTCCATTTGATTGACCTGGAATTTGATGAAAATAATGAGATTATTAGCACCTCTAATATGACGTTAATAAACTTGACATTAGTATGGTTTGGCCCTATGAGGGAAGACAAATTGTGCAATACAATCTTGAAGTTGCAATTCTGCATTGGAATTTTGGCTTTACTTGGAAGACACGCTATAGGCGCTATCATCTTTGGCCACGACAACCTATGGACAGTACGTTGA","protein_sequence":"MLRLFSLALITCLIYYSKNQGPSALVAAVGFGIAGYLATDMLIPRVGKSFIKIGLFGKDLSKPGRPVLPETIGAIPAAVYLFVMFIYIPFIFYKYMVITTSGGGHRDVSVVEDNGMNSNIFPHDKLSEYLSAILCLESTVLLGIADDLFDLRWRHKFFLPAIAAIPLLMVYYVDFGVTHVLIPGFMERWLKKTSVDLGLWYYVYMASMAIFCPNSINILAGVNGLEVGQCIVLAILALLNDLLYFSMGPLATRDSHRFSAVLIIPFLGVSLALWKWNRWPATVFVGDTYCYFAGMVFAVVGILGHFSKTMLLLFIPQIVNFIYSCPQLFKLVPCPRHRLPKFNEKDGLMYPSRANLKEEPPKSIFKPILKLLYCLHLIDLEFDENNEIISTSNMTLINLTLVWFGPMREDKLCNTILKLQFCIGILALLGRHAIGAIIFGHDNLWTVR"},{"created_at":"2011-05-24T20:36:50.000Z","updated_at":"2011-05-27T14:56:01.000Z","name":"Orotidine 5'-phosphate decarboxylase","uniprot_id":"P03962","uniprot_name":"PYRF_YEAST","enzyme":true,"transporter":false,"gene_name":"URA3","num_residues":267,"molecular_weight":"29239.30078","theoretical_pi":"7.45","general_function":"Involved in catalytic activity","specific_function":"Orotidine 5'-phosphate = UMP + CO(2)","reactions":[{"id":1809,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2331,"direction":"\u003e","locations":null,"altext":"Orotidine 5'-phosphate = UMP + CO(2).","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1DQX","cellular_location":null,"genbank_gene_id":"K02206","genbank_protein_id":"172060","gene_card_id":"URA3","chromosome_location":"chromosome 5","locus":"YEL021W","synonyms":["OMP decarboxylase","OMPDCase","OMPdecase","Uridine 5'-monophosphate synthase","UMP synthase"],"enzyme_classes":["4.1.1.23"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" orotidine-5'-phosphate decarboxylase activity"},{"category":"Function","description":" lyase activity"},{"category":"Function","description":" carbon-carbon lyase activity"},{"category":"Function","description":" carboxy-lyase activity"},{"category":"Process","description":" pyrimidine base biosynthetic process"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" 'de novo' pyrimidine base biosynthetic process"},{"category":"Process","description":" nitrogen compound metabolic process"},{"category":"Process","description":" pyrimidine nucleotide metabolic process"},{"category":"Process","description":" cellular nitrogen compound metabolic process"},{"category":"Process","description":" pyrimidine nucleotide biosynthetic process"},{"category":"Process","description":" nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"},{"category":"Process","description":" nucleobase, nucleoside and nucleotide metabolic process"},{"category":"Process","description":" pyrimidine nucleoside monophosphate biosynthetic process"},{"category":"Process","description":" nucleoside phosphate metabolic process"},{"category":"Process","description":" pyrimidine ribonucleoside monophosphate biosynthetic process"},{"category":"Process","description":" UMP biosynthetic process"},{"category":"Process","description":" nucleotide metabolic process"},{"category":"Process","description":" 'de novo' UMP biosynthetic process"},{"category":"Process","description":" cellular metabolic process"},{"category":"Process","description":" cellular aromatic compound metabolic process"},{"category":"Process","description":" nucleobase metabolic process"},{"category":"Process","description":" pyrimidine base metabolic process"}],"pfams":[{"name":"OMPdecase","identifier":"PF00215"}],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"}],"gene_sequence":"ATGTCGAAAGCTACATATAAGGAACGTGCTGCTACTCATCCTAGTCCTGTTGCTGCCAAGCTATTTAATATCATGCACGAAAAGCAAACAAACTTGTGTGCTTCATTGGATGTTCGTACCACCAAGGAATTACTGGAGTTAGTTGAAGCATTAGGTCCCAAAATTTGTTTACTAAAAACACATGTGGATATCTTGACTGATTTTTCCATGGAGGGCACAGTTAAGCCGCTAAAGGCATTATCCGCCAAGTACAATTTTTTACTCTTCGAAGACAGAAAATTTGCTGACATTGGTAATACAGTCAAATTGCAGTACTCTGCGGGTGTATACAGAATAGCAGAATGGGCAGACATTACGAATGCACACGGTGTGGTGGGCCCAGGTATTGTTAGCGGTTTGAAGCAGGCGGCAGAAGAAGTAACAAAGGAACCTAGAGGCCTTTTGATGTTAGCAGAATTGTCATGCAAGGGCTCCCTATCTACTGGAGAATATACTAAGGGTACTGTTGACATTGCGAAGAGCGACAAAGATTTTGTTATCGGCTTTATTGCTCAAAGAGACATGGGTGGAAGAGATGAAGGTTACGATTGGTTGATTATGACACCCGGTGTGGGTTTAGATGACAAGGGAGACGCATTGGGTCAACAGTATAGAACCGTGGATGATGTGGTCTCTACAGGATCTGACATTATTATTGTTGGAAGAGGACTATTTGCAAAGGGAAGGGATGCTAAGGTAGAGGGTGAACGTTACAGAAAAGCAGGCTGGGAAGCATATTTGAGAAGATGCGGCCAGCAAAACTAA","protein_sequence":"MSKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILTDFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVSGLKQAAEEVTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAKSDKDFVIGFIAQRDMGGRDEGYDWLIMTPGVGLDDKGDALGQQYRTVDDVVSTGSDIIIVGRGLFAKGRDAKVEGERYRKAGWEAYLRRCGQQN"},{"created_at":"2011-05-26T16:36:32.000Z","updated_at":"2011-05-27T15:01:00.000Z","name":"Ectonucleotide pyrophosphatase/phosphodiesterase 1","uniprot_id":"P25353","uniprot_name":"NPP1_YEAST","enzyme":true,"transporter":false,"gene_name":"NPP1","num_residues":742,"molecular_weight":"84733.20313","theoretical_pi":"4.24","general_function":"Involved in catalytic activity","specific_function":"Mediates extracellular nucleotide derived phosphate hydrolysis along with NPP2 and PHO5","reactions":[{"id":2432,"direction":"\u003e","locations":"Membrane; Single-pass type II membrane protein (Potential)","altext":"A dinucleotide + H(2)O = 2 mononucleotides.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"114-134","pdb_id":null,"cellular_location":"Membrane; Single-pass type II membrane protein (Potential)","genbank_gene_id":"X59720","genbank_protein_id":"14588938","gene_card_id":"NPP1","chromosome_location":"chromosome 3","locus":"YCR026C","synonyms":["E-NPP 1","Alkaline phosphodiesterase 1","Nucleotide pyrophosphatase","NPPase"],"enzyme_classes":["3.1.4.1","3.6.1.9"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"Phosphodiest","identifier":"PF01663"}],"pathways":[{"name":"Purine metabolism","kegg_map_id":"00230"},{"name":"Starch and sucrose metabolism","kegg_map_id":"00500"},{"name":"Riboflavin metabolism","kegg_map_id":"00740"},{"name":"Nicotinate and nicotinamide metabolism","kegg_map_id":"00760"},{"name":"Pantothenate and CoA biosynthesis","kegg_map_id":"00770"}],"gene_sequence":"ATGGAACTTCAGAATGATTTAGAGTCGCTCGATAACGAGCTGAATGATTTTAGTGAAGATCCATTTCGTGATGATTTCATAACGGATGAAGATGCTGTAAGATCGGGGTGGCGATCTGCGTGGACCAGGATGAAATATTGGTTTTATAAGAATAGACTGAAGTGGACAAACAATCCCATAGTGATTGGCGACGCGAAAGATAGTAGGGATGGTTCTAACTTTAGAAGGGGTATACCGCTATATGAATTAGACGCGAATGGTCAACCCATTGATACTGAACTTGTTGATGAGAATGAACTTTCTTTTGGAACGGGATTTCATTCCAAAGTGCCTTTTAAAATAATATTTCGCACATTGTTTGGCTCGCTGGTGTTTGCCATTTTTTTAATTCTGATGATTAACATAGCAAAACCCCATCACTCCACGAGAGTGCTATCGCACTTTGGCAGTCCTGAATTTGACCCTTACGTGAAGTATTTTAACGGTACGCATGAATTTTTCCCCTTAACGATAGTAATTTCACTAGACGGTTTCCATCCTTCACTCATATCTAAGAGGAACACACCGTTTTTACATGACTTATATGAATTGAAATATGATGGAGGTATGAATATCACGTCCACACCTTTTATGGTACCCAGCTTCCCTACGGAGACCTTTCCCAACCATTGGACGTTGGTTACTGGACAATACCCAATACACCACGGTATAGTCTCTAACGTATTTTGGGATCCTGATCTTAATGAGGAATTCCATCCAGGTGTATTGGACCCTCGAATATGGAACAATAATGATACAGAACCAATATGGCAAACTGTTCAGTCTGCATTTGACGGTGATATACCATTCAAAGCTGCTACCCATATGTGGCCAGGTAGCGATGTGAATTATACCAAGTATAATGAAGAGAAACTACAACCTGAACATAAAAATCCTATTGCTAGAGAGAGAACTCCATTTTACTTCGACGAATTCAATGCTAAAGAACCACTTTCGCAAAAATTATCCAAGATTATTGAATATGTGGATATGAGTACACTGAACGAAAGACCACAGCTAATTCTCGGTTATGTACCGAACGTAGATGCCTTTGGACATAAGCATGGATATCCGTCAGAGTCGGAATACTATTATGAAGACTTCACTGAAACACTGGGGGAAGTAGATACATTTCTGAAGCAACTAGTGGAATCGCTGCAAGAAAGAAATTTAACCAGCTTTACTAATTTGGTCATTGTTAGCGATCATGGTATGAGCGATATCGTAGTTCCCTCAAATGTTATTATATGGGAAGACTTACTGGACGAAAAATTGAGGAAGGATTATGTATCGCACGCATATCTAGAGGGTCCGATGATGGCTATATCGTTGAAAGATTCCGGAAACATCAATGAGGTTTACCACAATTTAAAGACTTCTATAGATGAAGACAAGTATACGGTTTACGTTAATGGAAATTTCCCCAAAGAATGGAACTTTAATGATGGAAAAAATCATCACATGGCGTCAATCTGGATTGTGCCCGAGCCTGGGTATGCAGTGATGAAGAAAGAACAATTGAAGAAGGTGGCAAAAGGTGATCATAAGGACAAAAACGAAGACAATGTGTTCACGATTGGATCACATGGATACGACAATAACGCGATCGATATGAGATCTGTATTTATTGGTATGGGGCCATATTTTCCACAGGGATACATTGAGCCGTTCCAAAATACCGAAATTTACAACCTTTTGTGTGATATTTGCGGTGTGGCAGAAAAGGACAGAAATTCCAATGATGGGACTGGGATGCTTATGAACCAACTCCGCGAACCCCAGAGCAGCGAAGAAGTAGAGATTGAAGATGACTTTGATTATTTGGTCAGTAAGTTTGGTGAATTCAGCACTTATAATATAATTTGGGGCGGGTACCCCGAAGAGACAGAACAAGACAATGTTGACAATGATAATGATGACAACGACGATGGAAACACTGATGAAATAGCCGCTATGCCATCTTCGTCATTAACGATAAAACTAGAAATGACAACTTCAATACCATCAGCAACTGAGACTCTACTGGGCGAAACATCACCATCATCAAGAAGCAGCAGCAGCAGCAGCATACAAGCTAGCGCTACTGCTAGCACAGTGGGGGATTGGCTTCAAGACATAATCAACGACGCAAAAGATCTCATTGACGACATAATTGACAGCATCGACGATTTAGTCGATTCTGATACCTAA","protein_sequence":"MELQNDLESLDNELNDFSEDPFRDDFITDEDAVRSGWRSAWTRMKYWFYKNRLKWTNNPIVIGDAKDSRDGSNFRRGIPLYELDANGQPIDTELVDENELSFGTGFHSKVPFKIIFRTLFGSLVFAIFLILMINIAKPHHSTRVLSHFGSPEFDPYVKYFNGTHEFFPLTIVISLDGFHPSLISKRNTPFLHDLYELKYDGGMNITSTPFMVPSFPTETFPNHWTLVTGQYPIHHGIVSNVFWDPDLNEEFHPGVLDPRIWNNNDTEPIWQTVQSAFDGDIPFKAATHMWPGSDVNYTKYNEEKLQPEHKNPIARERTPFYFDEFNAKEPLSQKLSKIIEYVDMSTLNERPQLILGYVPNVDAFGHKHGYPSESEYYYEDFTETLGEVDTFLKQLVESLQERNLTSFTNLVIVSDHGMSDIVVPSNVIIWEDLLDEKLRKDYVSHAYLEGPMMAISLKDSGNINEVYHNLKTSIDEDKYTVYVNGNFPKEWNFNDGKNHHMASIWIVPEPGYAVMKKEQLKKVAKGDHKDKNEDNVFTIGSHGYDNNAIDMRSVFIGMGPYFPQGYIEPFQNTEIYNLLCDICGVAEKDRNSNDGTGMLMNQLREPQSSEEVEIEDDFDYLVSKFGEFSTYNIIWGGYPEETEQDNVDNDNDDNDDGNTDEIAAMPSSSLTIKLEMTTSIPSATETLLGETSPSSRSSSSSSIQASATASTVGDWLQDIINDAKDLIDDIIDSIDDLVDSDT"},{"created_at":"2011-05-26T16:37:00.000Z","updated_at":"2011-06-05T02:20:18.000Z","name":"Mitochondrial carrier protein RIM2","uniprot_id":"P38127","uniprot_name":"RIM2_YEAST","enzyme":false,"transporter":true,"gene_name":"RIM2","num_residues":377,"molecular_weight":"42101.39844","theoretical_pi":"10.14","general_function":"Involved in binding","specific_function":null,"reactions":[],"signal_regions":"None","transmembrane_regions":"53-73;131-151;179-199;238-258;286-306;347-368","pdb_id":null,"cellular_location":"Mitochondrion inner membrane; Multi-pass membrane protein (Potential)","genbank_gene_id":"AY557871","genbank_protein_id":"45269633","gene_card_id":"RIM2","chromosome_location":"chromosome 2","locus":"YBR192W","synonyms":[],"enzyme_classes":[],"go_classes":[{"category":"Component","description":" cell part"},{"category":"Component","description":" membrane"},{"category":"Component","description":" organelle membrane"},{"category":"Component","description":" organelle inner membrane"},{"category":"Component","description":" mitochondrial inner membrane"},{"category":"Function","description":" binding"},{"category":"Process","description":" transmembrane transport"},{"category":"Process","description":" establishment of localization"},{"category":"Process","description":" transport"}],"pfams":[{"name":"Mito_carr","identifier":"PF00153"}],"pathways":[],"gene_sequence":"ATGCCAAAAAAATCCATTGAAGAATGGGAAGAGGATGCCATTGAATCAGTTCCATATTTAGCAAGTGATGAAAAGGGCTCTAATTATAAGGAAGCTACACAAATTCCACTAAATTTGAAGCAATCTGAAATTGAAAATCATCCAACAGTAAAACCATGGGTTCATTTTGTTGCTGGGGGTATTGGAGGAATGGCGGGTGCAGTTGTTACGTGTCCCTTTGATTTGGTGAAGACCCGATTACAAAGTGATATATTTTTGAAAGCATACAAATCACAAGCTGTTAATATCAGTAAAGGATCTACTCGTCCAAAGAGTATTAATTATGTCATTCAAGCAGGAACCCATTTCAAGGAAACACTGGGAATCATAGGCAATGTGTACAAACAAGAGGGTTTTAGAAGCTTGTTTAAGGGTTTGGGCCCCAATTTAGTCGGGGTTATTCCAGCAAGAAGTATTAATTTTTTTACCTATGGAACTACTAAAGATATGTATGCTAAAGCGTTCAATAATGGCCAAGAAACACCTATGATTCATCTGATGGCTGCTGCAACCGCAGGTTGGGCAACGGCGACGGCAACCAATCCTATTTGGTTGATTAAAACAAGAGTACAGCTTGATAAAGCTGGGAAAACATCGGTCCGACAGTACAAGAACTCTTGGGATTGCTTAAAAAGTGTTATAAGAAATGAGGGTTTCACTGGCTTGTACAAAGGGTTGAGTGCCTCTTATTTGGGTTCTGTTGAAGGTATACTTCAATGGCTATTATATGAACAAATGAAGAGGTTAATAAAGGAAAGGTCTATTGAGAAATTTGGATATCAAGCCGAAGGTACAAAAAGCACATCAGAGAAAGTCAAGGAGTGGTGTCAAAGATCAGGAAGCGCTGGTCTTGCAAAATTTGTGGCTAGTATAGCAACATATCCGCACGAAGTTGTCAGGACGAGATTGAGACAGACGCCCAAGGAAAATGGTAAACGAAAGTATACAGGTTTAGTACAAAGTTTCAAAGTTATAATTAAAGAAGAGGGACTCTTTTCAATGTATAGTGGGTTGACCCCGCATTTGATGAGAACAGTTCCGAACAGTATAATTATGTTTGGTACATGGGAAATTGTTATAAGGCTACTATCGTAG","protein_sequence":"MPKKSIEEWEEDAIESVPYLASDEKGSNYKEATQIPLNLKQSEIENHPTVKPWVHFVAGGIGGMAGAVVTCPFDLVKTRLQSDIFLKAYKSQAVNISKGSTRPKSINYVIQAGTHFKETLGIIGNVYKQEGFRSLFKGLGPNLVGVIPARSINFFTYGTTKDMYAKAFNNGQETPMIHLMAAATAGWATATATNPIWLIKTRVQLDKAGKTSVRQYKNSWDCLKSVIRNEGFTGLYKGLSASYLGSVEGILQWLLYEQMKRLIKERSIEKFGYQAEGTKSTSEKVKEWCQRSGSAGLAKFVASIATYPHEVVRTRLRQTPKENGKRKYTGLVQSFKVIIKEEGLFSMYSGLTPHLMRTVPNSIIMFGTWEIVIRLLS"},{"created_at":"2011-05-26T16:37:26.000Z","updated_at":"2011-05-26T16:37:26.000Z","name":"Putative uridine kinase YDR020C","uniprot_id":"Q12084","uniprot_name":"YD020_YEAST","enzyme":true,"transporter":false,"gene_name":null,"num_residues":232,"molecular_weight":"26594.80078","theoretical_pi":"4.57","general_function":"Involved in ATP binding","specific_function":"ATP + uridine = ADP + UMP","reactions":[{"id":2433,"direction":"\u003e","locations":"Cytoplasm. Nucleus","altext":"ATP + uridine = ADP + UMP.","export":false,"pw_reaction_id":null,"source":null},{"id":2434,"direction":"\u003e","locations":"Cytoplasm. Nucleus","altext":"ATP + cytidine = ADP + CMP.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm. Nucleus","genbank_gene_id":"AY558571","genbank_protein_id":"45271032","gene_card_id":null,"chromosome_location":null,"locus":"YDR020C","synonyms":[],"enzyme_classes":["2.7.1.48"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" transferase activity, transferring phosphorus-containing groups"},{"category":"Function","description":" binding"},{"category":"Function","description":" nucleoside binding"},{"category":"Function","description":" purine nucleoside binding"},{"category":"Function","description":" adenyl nucleotide binding"},{"category":"Function","description":" adenyl ribonucleotide binding"},{"category":"Function","description":" ATP binding"},{"category":"Function","description":" kinase activity"},{"category":"Function","description":" phosphotransferase activity, alcohol group as acceptor"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"PRK","identifier":"PF00485"}],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"}],"gene_sequence":"ATGGACAGAAAAGCTGTCGAAGAAAAAAGAATTGTTATTTCTATCGGTGGAGGGCATGCTACTGGTGTTGGAGCAATTGCACTGGATTTACAAAATACTTTCAAAAGCCTATATAACTCTATCAATATAAGGGTAATAAACCTAGATAATATGATAGAAGGGAACATCAAGAGCTACAATAATAACGACTATGATTTTGATAATATCCTTAATTTGGTATATGAAAAGCACGCTGTAACTTCTCAAAATGACATGATTCAACATGATTACGAGGACCCGATAGATTTGATAATAGTATGTGGCTGTTATGCGCTATACGATAAACGCATCAACGAAATATCTCAATTAAAGGTATTCTTGGATAGTGATGCAGATAAAAGATTAATTAGTCTAATCAAGAAGAAGAACGTAGGGAGCAATGAACAACTAGCCCAGTTGATCACTGAGTATATGGACCATCTGCGCCCGGAGATGCAACAATATATAGAGCCCACTAGAACTTTTGCAGATTTGATCATTCCTTCTACAAATGAAAATCTAGGGCGCGCAGTCCTCGTGGACGGTATAGTTAAAGCAATCGAAGATACCAAAAGCCAAATAGAAGGCAACAATACGAACAACAAAATACGCCCACGTTTATGGGATTTCGAAGCTGAAACAATGGACTTGGAGAAAGATAGATATTACGATCTGTCATGA","protein_sequence":"MDRKAVEEKRIVISIGGGHATGVGAIALDLQNTFKSLYNSINIRVINLDNMIEGNIKSYNNNDYDFDNILNLVYEKHAVTSQNDMIQHDYEDPIDLIIVCGCYALYDKRINEISQLKVFLDSDADKRLISLIKKKNVGSNEQLAQLITEYMDHLRPEMQQYIEPTRTFADLIIPSTNENLGRAVLVDGIVKAIEDTKSQIEGNNTNNKIRPRLWDFEAETMDLEKDRYYDLS"},{"created_at":"2011-05-26T16:38:22.000Z","updated_at":"2011-07-22T17:54:14.000Z","name":"Golgi apyrase","uniprot_id":"P40009","uniprot_name":"YND1_YEAST","enzyme":true,"transporter":false,"gene_name":"YND1","num_residues":630,"molecular_weight":"71851.20313","theoretical_pi":"6.18","general_function":"Involved in hydrolase activity","specific_function":"Catalyzes the hydrolysis of phosphoanhydride bonds of nucleoside tri- and di-phosphates. Has equal high activity toward ADP/ATP, GDP/GTP, and UDP/UTP and approximately 50% less toward CDP/CTP and thiamine pyrophosphate. Has no activity toward GMP. Required for Golgi glycosylation and cell wall integrity. Together with CDC55, required for adenovirus E4orf4 (early region 4 open reading frame 4) induced toxicity, the apyrase activity is not required for this function. Plays a role in sphingolipid synthesis","reactions":[{"id":1341,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1618,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1782,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1784,"direction":"\u003e","locations":"Golgi;cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1785,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2043,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2435,"direction":"\u003e","locations":"Golgi apparatus. Membrane; Single-pass membrane protein (Potential)","altext":"ATP + 2 H(2)O = AMP + 2 phosphate.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"501-517","pdb_id":null,"cellular_location":"Golgi apparatus. Membrane; Single-pass membrane protein (Potential)","genbank_gene_id":"AF203695","genbank_protein_id":"6573161","gene_card_id":"YND1","chromosome_location":"chromosome 5","locus":"YER005W","synonyms":["ATP-diphosphatase","ATP-diphosphohydrolase","Adenosine diphosphatase","ADPase","Golgi nucleoside diphosphatase","Yeast nucleoside diphosphatase 1"],"enzyme_classes":["3.6.1.5"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" hydrolase activity"},{"category":"Process","description":" Not Available"}],"pfams":[{"name":"GDA1_CD39","identifier":"PF01150"}],"pathways":[{"name":"Purine metabolism","kegg_map_id":"00230"},{"name":"Pyrimidine metabolism","kegg_map_id":"00240"}],"gene_sequence":"ATGCTCATAGAAAACACTAATGATCGGTTTGGTATCGTCATAGATGCAGGGTCTTCGGGTTCGAGAATCCATGTGTTTAAGTGGCAGGACACGGAATCGCTTCTTCATGCAACAAACCAGGACTCACAGTCCATATTACAATCAGTACCTCATATTCATCAAGAAAAAGACTGGACTTTTAAGCTGAATCCAGGCTTGTCGAGTTTTGAAAAAAAACCTCAAGATGCGTACAAATCTCACATCAAGCCGTTACTAGATTTTGCTAAGAATATTATCCCTGAATCACATTGGTCGAGTTGTCCCGTTTTTATTCAAGCAACCGCGGGCATGCGCCTTTTACCTCAAGACATACAATCTTCCATTTTGGATGGTTTGTGTCAGGGGCTCAAACACCCTGCAGAATTTTTGGTTGAGGATTGCTCAGCACAAATTCAAGTCATTGATGGTGAAACCGAAGGTTTATATGGCTGGCTTGGCTTAAACTATCTATATGGACACTTTAATGACTATAATCCAGAGGTCTCTGACCATTTTACATTTGGGTTTATGGACATGGGCGGTGCCTCTACTCAGATTGCGTTTGCACCGCATGATTCAGGAGAAATAGCTAGACATAGAGATGACATCGCCACCATCTTCTTGAGGAGTGTTAACGGAGATTTGCAGAAATGGGACGTTTTTGTTAGTACGTGGTTAGGGTTTGGTGCCAATCAGGCTAGAAGAAGGTACTTGGCTCAGTTGATCAATACCCTTCCAGAAAACACAAATGATTACGAAAATGATGACTTCTCTACAAGGAACTTGAATGATCCATGTATGCCGCGAGGAAGCAGCACGGATTTTGAATTTAAAGATACCATATTTCACATCGCGGGTTCTGGGAATTACGAACAATGTACAAAATCTATTTATCCGTTACTTTTAAAGAACATGCCTTGTGATGACGAGCCGTGCTTGTTTAATGGTGTTCATGCTCCTCGAATAGACTTTGCCAATGACAAATTTATAGGTACTTCTGAGTACTGGTACACTGCCAACGACGTATTCAAACTTGGGGGCGAATACAACTTTGACAAATTTAGCAAAAGCCTAAGGGAGTTTTGCAATTCCAATTGGACGCAAATATTAGCGAACAGTGATAAAGGCGTGTATAATTCTATTCCGGAGAATTTTTTGAAAGATGCATGCTTTAAGGGCAATTGGGTCCTTAATATACTTCATGAAGGGTTTGATATGCCTCGAATAGATGTCGACGCAGAAAATGTCAATGACAGGCCCTTATTTCAAAGTGTGGAAAAAGTCGAAGAACGAGAGTTATCGTGGACACTAGGCAGAATTTTACTTTATGCCTCAGGTAGCATATTGGCAGGTAATGATGACTTCATGGTGGGTATTGCGCCCAGTGAAAGAAGAACTAAGCTCACTGGTAAGAAATTCATACCTGGCAAGTTACTGGAGTCTGATCAACTACGCAAGCAAAGTTCCAGCCTTTCTAATAAAGGATTTTTGATGTGGTTCGCAATTATTTGTTGCATATTTTACTTGATCTTTCATAGGTCACACATAATCAGAAGACGTTTTTCCGGTCTGTACAACATTACCAAGGACTTTAAGACAGGCATAAGGAGAAGGTTGAAATTTCTAAGGAGATCAGATCCATTTTCCAGATTGGAGGAAGGTGAACTTGGAACAGACGTAGATGGCTTCAAAGATGTGTACAGGATGAAGAGTAGCAGTATGTTTGATCTTGGTAAGAGTTCAGCCACAATGCAAAGGGAGCACGAACCACAAAGGACAGCAAGTCAGTCCGCTAATCTCGCTCCGTCAAACTTACGACCTGCGTTTTCTATGGCTGATTTTTCCAAATTTAAGGACAGTAGGCTATATGAT","protein_sequence":"MLIENTNDRFGIVIDAGSSGSRIHVFKWQDTESLLHATNQDSQSILQSVPHIHQEKDWTFKLNPGLSSFEKKPQDAYKSHIKPLLDFAKNIIPESHWSSCPVFIQATAGMRLLPQDIQSSILDGLCQGLKHPAEFLVEDCSAQIQVIDGETEGLYGWLGLNYLYGHFNDYNPEVSDHFTFGFMDMGGASTQIAFAPHDSGEIARHRDDIATIFLRSVNGDLQKWDVFVSTWLGFGANQARRRYLAQLINTLPENTNDYENDDFSTRNLNDPCMPRGSSTDFEFKDTIFHIAGSGNYEQCTKSIYPLLLKNMPCDDEPCLFNGVHAPRIDFANDKFIGTSEYWYTANDVFKLGGEYNFDKFSKSLREFCNSNWTQILANSDKGVYNSIPENFLKDACFKGNWVLNILHEGFDMPRIDVDAENVNDRPLFQSVEKVEERELSWTLGRILLYASGSILAGNDDFMVGIAPSERRTKLTGKKFIPGKLLESDQLRKQSSSLSNKGFLMWFAIICCIFYLIFHRSHIIRRRFSGLYNITKDFKTGIRRRLKFLRRSDPFSRLEEGELGTDVDGFKDVYRMKSSSMFDLGKSSATMQREHEPQRTASQSANLAPSNLRPAFSMADFSKFKDSRLYD"},{"created_at":"2011-05-26T16:38:48.000Z","updated_at":"2011-05-27T15:01:00.000Z","name":"Ectonucleotide pyrophosphatase/phosphodiesterase 2","uniprot_id":"P39997","uniprot_name":"NPP2_YEAST","enzyme":true,"transporter":false,"gene_name":"NPP2","num_residues":493,"molecular_weight":"57354.10156","theoretical_pi":"5.46","general_function":"Involved in catalytic activity","specific_function":"Mediates extracellular nucleotide derived phosphate hydrolysis along with NPP1 and PHO5","reactions":[{"id":2432,"direction":"\u003e","locations":"Membrane; Single-pass type II membrane protein (Potential)","altext":"A dinucleotide + H(2)O = 2 mononucleotides.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"29-45","pdb_id":null,"cellular_location":"Membrane; Single-pass type II membrane protein (Potential)","genbank_gene_id":"AY692687","genbank_protein_id":"51012825","gene_card_id":"NPP2","chromosome_location":"chromosome 5","locus":"YEL016C","synonyms":["E-NPP 2","Alkaline phosphodiesterase 1","Nucleotide pyrophosphatase","NPPase"],"enzyme_classes":["3.1.4.1","3.6.1.9"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"Phosphodiest","identifier":"PF01663"}],"pathways":[{"name":"Purine metabolism","kegg_map_id":"00230"},{"name":"Starch and sucrose metabolism","kegg_map_id":"00500"},{"name":"Riboflavin metabolism","kegg_map_id":"00740"},{"name":"Nicotinate and nicotinamide metabolism","kegg_map_id":"00760"},{"name":"Pantothenate and CoA biosynthesis","kegg_map_id":"00770"}],"gene_sequence":"ATGCTTCTTTTCGAGCAACCTGTTGACCTTGAAAAAAATAATGAAGATGATACGAACATAAAACCTTTCGCAATATCACGACATTTTTTATTGAAACTTTTGCTTTGCGGTATAATACTCATTGAGTTGCTTTTATATTCGAAGTGCCCAAAACCTATTGATAATGGGCCCCGGACAATTGCGAATAGATCAAATACTTACTTCAACGGCACACATGATTTCAAGACGTTAACGATATTGATATCTATCGATGGGTTCCATCCGAGATTGATAGATGCAAAATACACGCCATTTCTTTACAACTTGCACAATTTGCGGTCCCCGTACGATATGAATATCACGACTGCACCGTATATGATCCCAAGTTTTCCCATTCAGACATTTCCCAACCACTGGAGCATGGTAACGGGAAAATATCCCATTGAGCACGGTATTGTTTCCAATATATTCTGGGATAATTTCACGAGTAGCGAATTTAGACCAAATAACCTCGACGCAAGAATTTGGAGCAACACGGCTGACCCTATTTGGCAACTACTGCAAACTGAATCGCAAGGCGAATATAAAGTGGCCACGCATATGTGGCCTGGAAGTGAGGTTGTGTATGAGGACCACGGGGATGTACCTAGGGAAAGAATGCCATTTTATTTTGGGAAATTCAATCAATGGGAAAAACTTCAAGATAAATTAGCTCAAATTTTCCGATACATAGATATGCCTCAGCTTAAAGATAGGCCAGAATTGGTCATAAGTTATATACCCAATGTTGATTCGTACGGACACAGTTTTGGATACGATTTACGAGATAAGCGGCTACAAAAGCTGATCGGTGAAGTCGATGGATTCTTTCTCGATTTGATTGAAGGCCTGCAAAAAAGAAACTTGTTGAAAATTAGCAATGTTATGATTGTTAGTGACCATGGCATGAGCAATGTCAACGCGAATGACGGTGAGCATGTTGTTGTGTGGGAAAGGGTGTTCCCGGCCGACGCAATGAGCGCATTTATTTCGCATCTTTATAACGAGGGCCCCATGATGATGGTATGTTTGAAAAACCCTCGAGACAAGCAATGGATTTGTGACTTGATTGAAGCTCAGTTAGAGAAAGCATATGGAGATGAAATATCGAGGAAGTTTCACGTGATCCTGAAAGAAGATTTCGACCCGAGCTGGAAATATTTCCAATACGATAACAGAAAGCACAGATATGACGATAGGGTCGGCGATATCTGGATTCTCGCAGATGAATACTACGCCATTGTAAAAGAAATGGGTGATGTGCCTATCGGCATTATGGGCACACATGGATACAACTTTAACAACTGTAGTGATATGGCATCTATATTCATTGGAATGGGTCCGATGTTCAACAATGAAGTCGTACCTCCATTTGAAAACATCGAAGTATACAATATGCTGATCAAGGCAAGTGCGCTTTTGGGAGAAGAAAAGACAAAGAAGGAGAAGAGTTTATTACAATAA","protein_sequence":"MLLFEQPVDLEKNNEDDTNIKPFAISRHFLLKLLLCGIILIELLLYSKCPKPIDNGPRTIANRSNTYFNGTHDFKTLTILISIDGFHPRLIDAKYTPFLYNLHNLRSPYDMNITTAPYMIPSFPTQTFPNHWSMVTGKYPIEHGIVSNIFWDNFTSSEFRPNNLDARIWSNTADPIWQLLQTESQGEYKVATHMWPGSEVVYEDHGDVPRERMPFYFGKFNQWEKLQDKLAQIFRYIDMPQLKDRPELVISYIPNVDSYGHSFGYDLRDKRLQKLIGEVDGFFLDLIEGLQKRNLLKISNVMIVSDHGMSNVNANDGEHVVVWERVFPADAMSAFISHLYNEGPMMMVCLKNPRDKQWICDLIEAQLEKAYGDEISRKFHVILKEDFDPSWKYFQYDNRKHRYDDRVGDIWILADEYYAIVKEMGDVPIGIMGTHGYNFNNCSDMASIFIGMGPMFNNEVVPPFENIEVYNMLIKASALLGEEKTKKEKSLLQ"},{"created_at":"2011-05-26T16:39:20.000Z","updated_at":"2011-05-27T15:01:00.000Z","name":"Uridylate kinase","uniprot_id":"P15700","uniprot_name":"UMPK_YEAST","enzyme":true,"transporter":false,"gene_name":"URA6","num_residues":204,"molecular_weight":"22933.0","theoretical_pi":"6.53","general_function":"Involved in ATP binding","specific_function":"Furnishes the cell with pyrimidines. Accepts UMP, and dUMP as phosphate acceptors with high activity; to a lesser extent, it can also use IMP, GMP, dGMP, 5-iodo-dUMP, XMP, and dTMP as substrates. ATP and dATP are the best phosphate donors; can use GTP, dGTP, dCTP, and dTTP to some degree (30-50%)","reactions":[{"id":2033,"direction":"\u003c\u003e","locations":"cytoplasm;nucleus","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2039,"direction":"\u003c\u003e","locations":"cytoplasm;nucleus","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2436,"direction":"\u003e","locations":"Cytoplasm. Nucleus.","altext":"ATP + UMP = ADP + UDP.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":"1UKZ","cellular_location":"Cytoplasm. Nucleus.","genbank_gene_id":"AY558074","genbank_protein_id":"45270038","gene_card_id":"URA6","chromosome_location":"chromosome 11","locus":"YKL024C","synonyms":["UK","Uridine monophosphate kinase","UMP kinase"],"enzyme_classes":["2.7.4.-"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" phosphotransferase activity, phosphate group as acceptor"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" nucleobase, nucleoside, nucleotide kinase activity"},{"category":"Function","description":" transferase activity, transferring phosphorus-containing groups"},{"category":"Function","description":" binding"},{"category":"Function","description":" nucleoside binding"},{"category":"Function","description":" purine nucleoside binding"},{"category":"Function","description":" adenyl nucleotide binding"},{"category":"Function","description":" adenyl ribonucleotide binding"},{"category":"Function","description":" ATP binding"},{"category":"Function","description":" kinase activity"},{"category":"Function","description":" nucleotide kinase activity"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" nitrogen compound metabolic process"},{"category":"Process","description":" cellular nitrogen compound metabolic process"},{"category":"Process","description":" nucleobase, nucleoside, nucleotide and nucleic acid metabolic process"}],"pfams":[{"name":"ADK","identifier":"PF00406"}],"pathways":[],"gene_sequence":"ATGACAGCTGCCACTACATCACAGCCAGCTTTCTCGCCTGACCAAGTTTCCGTGATCTTCGTTCTAGGAGGACCCGGTGCAGGCAAGGGTACTCAGTGTGAAAAACTAGTTAAGGACTATTCATTTGTCCATTTGTCAGCCGGAGACCTTCTACGTGCTGAGCAGGGCAGAGCAGGTTCCCAATATGGGGAATTGATCAAGAACTGCATCAAAGAGGGCCAGATTGTCCCTCAAGAGATTACTTTGGCGCTTTTACGCAACGCTATTTCCGATAACGTCAAGGCGAACAAGCATAAGTTCTTAATTGACGGATTTCCTAGGAAGATGGATCAAGCCATTTCCTTTGAAAGAGACATCGTTGAAAGCAAATTCATCCTGTTCTTTGACTGCCCTGAAGATATCATGTTAGAGAGACTATTGGAGCGTGGCAAGACCAGTGGTAGAAGCGATGACAACATTGAGTCCATTAAGAAGAGATTTAACACTTTCAAGGAGACTAGTATGCCCGTCATCGAGTACTTTGAAACCAAATCGAAAGTCGTCCGTGTTCGTTGCGACAGATCCGTCGAAGATGTGTACAAAGACGTCCAAGACGCTATCCGTGATAGCTTATAG","protein_sequence":"MTAATTSQPAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVPQEITLALLRNAISDNVKANKHKFLIDGFPRKMDQAISFERDIVESKFILFFDCPEDIMLERLLERGKTSGRSDDNIESIKKRFNTFKETSMPVIEYFETKSKVVRVRCDRSVEDVYKDVQDAIRDSL"},{"created_at":"2011-05-26T16:39:47.000Z","updated_at":"2011-07-22T17:53:50.000Z","name":"Suppressor of disruption of TFIIS","uniprot_id":"P53078","uniprot_name":"SDT1_YEAST","enzyme":true,"transporter":false,"gene_name":"SDT1","num_residues":280,"molecular_weight":"31968.40039","theoretical_pi":"6.35","general_function":"Involved in catalytic activity","specific_function":"Could be an enzyme that inactivates 6-azauracil by modifying it","reactions":[{"id":1202,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":1210,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasmic","genbank_gene_id":"AY692802","genbank_protein_id":"51013055","gene_card_id":"SDT1","chromosome_location":"chromosome 7","locus":"YGL224C","synonyms":[],"enzyme_classes":[],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" hydrolase activity"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"Hydrolase","identifier":"PF00702"}],"pathways":[],"gene_sequence":"ATGACTGTTGAATATACTGCATCCGATTTGGCAACCTATCAGAATGAGGTGAACGAACAAATTGCCAAGAATAAAGCACATCTTGAATCATTGACTCATCCAGGTTCGAAAGTGACATTTCCGATCGATCAAGATATTTCTGCTACACCTCAAAACCCGAACTTAAAAGTTTTCTTTTTTGATATCGACAACTGTCTCTATAAATCATCCACGAGAATTCACGATCTTATGCAACAATCTATACTGAGGTTCTTTCAAACACACTTGAAACTATCACCTGAAGATGCTCACGTTTTGAATAACTCTTACTACAAAGAGTATGGACTTGCCATAAGGGGACTTGTAATGTTCCACAAAGTGAACGCACTGGAATATAACCGGCTTGTGGATGATTCCTTACCACTACAAGATATCTTGAAACCTGATATACCATTAAGGAATATGCTGTTGAGATTGAGACAATCGGGAAAGATTGATAAATTGTGGCTTTTCACCAACGCTTATAAAAACCACGCAATACGTTGCCTGAGATTGTTGGGTATAGCGGATTTATTTGATGGATTGACATATTGTGACTACTCTAGGACAGATACGCTGGTCTGCAAACCACATGTTAAAGCATTTGAAAAAGCCATGAAGGAAAGCGGGTTGGCAAGATACGAGAATGCTTATTTTATAGATGACAGTGGGAAAAACATCGAGACAGGTATCAAATTGGGCATGAAAACATGTATTCATTTAGTTGAGAATGAAGTAAATGAAATTTTGGGGCAAACACCAGAAGGCGCTATTGTCATTAGTGATATATTGGAGTTACCACACGTTGTGTCCGACCTGTTCTAA","protein_sequence":"MTVEYTASDLATYQNEVNEQIAKNKAHLESLTHPGSKVTFPIDQDISATPQNPNLKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKVNALEYNRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEILGQTPEGAIVISDILELPHVVSDLF"},{"created_at":"2011-05-26T16:40:26.000Z","updated_at":"2011-05-27T15:01:00.000Z","name":"UDP-N-acetylglucosamine transferase subunit ALG13","uniprot_id":"P53178","uniprot_name":"ALG13_YEAST","enzyme":true,"transporter":false,"gene_name":"ALG13","num_residues":202,"molecular_weight":"22660.90039","theoretical_pi":"5.66","general_function":"Involved in transferase activity, transferring hexosyl groups","specific_function":"Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway","reactions":[{"id":2437,"direction":"\u003e","locations":"Endoplasmic reticulum","altext":"UDP-N-acetyl-D-glucosamine + N-acetyl-D-glucosaminyl-diphosphodolichol = UDP + N,N'-diacetylchitobiosyl-diphosphodolichol.","export":false,"pw_reaction_id":null,"source":null},{"id":14870,"direction":null,"locations":null,"altext":null,"export":true,"pw_reaction_id":"PW_R007061","source":"Smpdb"}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Endoplasmic reticulum","genbank_gene_id":"Z72569","genbank_protein_id":"1322537","gene_card_id":"ALG13","chromosome_location":"chromosome 7","locus":"YGL047W","synonyms":["Asparagine-linked glycosylation protein 13"],"enzyme_classes":["2.4.1.141"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" transferase activity, transferring glycosyl groups"},{"category":"Function","description":" transferase activity, transferring hexosyl groups"},{"category":"Function","description":" binding"},{"category":"Function","description":" carbohydrate binding"},{"category":"Process","description":" metabolic process"},{"category":"Process","description":" primary metabolic process"},{"category":"Process","description":" carbohydrate metabolic process"},{"category":"Process","description":" lipid metabolic process"},{"category":"Process","description":" cellular lipid metabolic process"},{"category":"Process","description":" lipid modification"},{"category":"Process","description":" lipid glycosylation"}],"pfams":[{"name":"Glyco_tran_28_C","identifier":"PF04101"}],"pathways":[{"name":"N-Glycan biosynthesis","kegg_map_id":"00510"}],"gene_sequence":"ATGGGTATTATTGAAGAAAAGGCTCTTTTTGTTACGTGTGGGGCAACGGTGCCATTTCCAAAGCTCGTCTCATGTGTGCTAAGCGACGAATTCTGCCAAGAATTGATTCAATATGGATTCGTACGTCTAATCATTCAGTTTGGGAGAAACTACAGTTCTGAATTTGAGCATTTAGTGCAAGAACGCGGGGGCCAAAGAGAAAGCCAAAAAATTCCAATTGACCAGTTTGGCTGTGGCGACACCGCAAGACAGTATGTCCTGATGAACGGGAAATTAAAGGTGATCGGGTTTGACTTTTCGACCAAGATGCAAAGTATTATACGTGATTATTCAGATTTGGTCATATCACACGCTGGAACGGGCTCTATACTAGATTCTCTACGGTTGAATAAACCGTTGATAGTTTGCGTAAACGATTCTTTGATGGATAACCACCAGCAGCAGATAGCAGACAAGTTTGTAGAGTTGGGCTACGTATGGTCTTGTGCACCCACTGAAACAGGTTTGATAGCTGGTTTACGTGCATCTCAAACAGAGAAACTCAAACCATTCCCAGTTTCTCATAACCCGTCATTTGAGCGATTGCTAGTTGAAACTATATACAGCTAG","protein_sequence":"MGIIEEKALFVTCGATVPFPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFGCGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDLVISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVELGYVWSCAPTETGLIAGLRASQTEKLKPFPVSHNPSFERLLVETIYS"},{"created_at":"2011-05-26T16:41:01.000Z","updated_at":"2011-07-22T17:54:33.000Z","name":"Uridine kinase","uniprot_id":"P27515","uniprot_name":"URK1_YEAST","enzyme":true,"transporter":false,"gene_name":"URK1","num_residues":501,"molecular_weight":"56295.5","theoretical_pi":"7.8","general_function":"Involved in ATP binding","specific_function":"Catalyzes the conversion of uridine into UMP and cytidine into CMP in the pyrimidine salvage pathway","reactions":[{"id":1425,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2037,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2038,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2433,"direction":"\u003e","locations":"Cytoplasm. Nucleus","altext":"ATP + uridine = ADP + UMP.","export":false,"pw_reaction_id":null,"source":null},{"id":2434,"direction":"\u003e","locations":"Cytoplasm. Nucleus","altext":"ATP + cytidine = ADP + CMP.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":"Cytoplasm. Nucleus","genbank_gene_id":"X53998","genbank_protein_id":"4773","gene_card_id":"URK1","chromosome_location":"chromosome 14","locus":"YNR012W","synonyms":["Uridine monophosphokinase"],"enzyme_classes":["2.7.1.48"],"go_classes":[{"category":"Component","description":" Not Available"},{"category":"Function","description":" catalytic activity"},{"category":"Function","description":" transferase activity"},{"category":"Function","description":" transferase activity, transferring phosphorus-containing groups"},{"category":"Function","description":" binding"},{"category":"Function","description":" nucleoside binding"},{"category":"Function","description":" purine nucleoside binding"},{"category":"Function","description":" adenyl nucleotide binding"},{"category":"Function","description":" adenyl ribonucleotide binding"},{"category":"Function","description":" ATP binding"},{"category":"Function","description":" kinase activity"},{"category":"Function","description":" phosphotransferase activity, alcohol group as acceptor"},{"category":"Process","description":" metabolic process"}],"pfams":[{"name":"PRK","identifier":"PF00485"}],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"}],"gene_sequence":"ATGTCCCATCGTATAGCACCTTCCAAAGAACGATCTTCATCATTTATTTCAATTTTAGACGATGAAACAAGAGACACATTGAAAGCTAATGCAGTCATGGATGGTGAAGTAGATGTCAAAAAAACAAAAGGAAAAAGCTCTCGGTATATCCCACCATGGACAACTCCATATATAATAGGTATAGGTGGTGCTTCAGGTTCAGGCAAGACAAGCGTTGCTGCTAAGATTGTGTCGTCAATTAATGTTCCCTGGACAGTATTAATATCTTTGGATAACTTTTACAATCCATTAGGCCCAGAGGACAGAGCCAGAGCCTTTAAAAATGAATACGATTTCGACGAGCCAAATGCCATCAACTTAGATTTGGCATATAAGTGCATTTTGAACTTAAAGGAGGGCAAAAGGACAAATATCCCAGTTTATAGCTTCGTCCACCACAATAGAGTTCCTGATAAAAATATAGTCATATACGGGGCCAGTGTGGTAGTTATCGAAGGGATCTACGCCCTTTACGATCGCCGATTGCTGGATTTGATGGACTTGAAAATTTATGTTGACGCTGATTTGGATGTCTGCTTAGCAAGAAGATTGTCGAGAGATATAGTTTCCAGAGGGAGAGATTTGGATGGTTGTATTCAACAATGGGAGAAATTTGTGAAACCAAATGCGGTAAAGTTTGTGAAACCAACAATGAAGAATGCAGATGCTATCATTCCATCGATGAGTGATAATGCTACAGCGGTAAATTTAATCATTAACCACATCAAGTCAAAACTGGAACTAAAATCAAATGAACACTTAAGAGAGCTAATCAAATTGGGCTCTTCTCCTTCACAAGATGTGCTTAATCGTAACATAATTCATGAATTGCCGCCCACCAACCAAGTTCTTTCGCTGCATACTATGCTTCTAAATAAAAATCTAAATTGCGCGGACTTTGTTTTCTACTTTGACAGGTTAGCAACAATTTTGTTATCATGGGCACTTGATGACATTCCTGTAGCACATACGAACATAATTACACCTGGTGAGCATACCATGGAAAACGTTATTGCCTGTCAATTCGATCAAGTTACAGCTGTTAATATTATTCGATCTGGCGATTGTTTTATGAAGTCTTTGAGAAAGACGATCCCCAATATCACAATTGGTAAATTGTTGATTCAGTCCGATTCACAAACTGGGGAACCTCAACTGCATTGCGAATTTTTACCCCCAAATATAGAAAAGTTTGGCAAGGTTTTCTTAATGGAAGGTCAAATCATAAGTGGTGCGGCCATGATCATGGCCATCCAGGTGCTTTTAGATCATGGTATTGATTTGGAAAAGATTAGCGTGGTGGTTTATTTGGCCACTGAAGTTGGTATCCGACGTATATTAAATGCATTTGATAACAAAGTCAACATTTTTGCTGGTATGATCATCTCCAGAGAAAAGTTACAAAATCATCAATACAAATGGGCATTGACCAGATTTTTTGATTCAAAGTATTTTGGTTGTGATTGA","protein_sequence":"MSHRIAPSKERSSSFISILDDETRDTLKANAVMDGEVDVKKTKGKSSRYIPPWTTPYIIGIGGASGSGKTSVAAKIVSSINVPWTVLISLDNFYNPLGPEDRARAFKNEYDFDEPNAINLDLAYKCILNLKEGKRTNIPVYSFVHHNRVPDKNIVIYGASVVVIEGIYALYDRRLLDLMDLKIYVDADLDVCLARRLSRDIVSRGRDLDGCIQQWEKFVKPNAVKFVKPTMKNADAIIPSMSDNATAVNLIINHIKSKLELKSNEHLRELIKLGSSPSQDVLNRNIIHELPPTNQVLSLHTMLLNKNLNCADFVFYFDRLATILLSWALDDIPVAHTNIITPGEHTMENVIACQFDQVTAVNIIRSGDCFMKSLRKTIPNITIGKLLIQSDSQTGEPQLHCEFLPPNIEKFGKVFLMEGQIISGAAMIMAIQVLLDHGIDLEKISVVVYLATEVGIRRILNAFDNKVNIFAGMIISREKLQNHQYKWALTRFFDSKYFGCD"},{"created_at":"2011-05-27T17:14:06.000Z","updated_at":"2011-05-29T05:06:52.000Z","name":"Uracil phosphoribosyltransferase","uniprot_id":"P18562","uniprot_name":"UPP_YEAST","enzyme":true,"transporter":false,"gene_name":"FUR1","num_residues":216,"molecular_weight":"24594.19922","theoretical_pi":"5.44","general_function":"Nucleotide transport and metabolism","specific_function":"Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate","reactions":[{"id":2034,"direction":"\u003e","locations":"cytoplasm","altext":null,"export":true,"pw_reaction_id":null,"source":null},{"id":2834,"direction":"\u003e","locations":null,"altext":"UMP + diphosphate = uracil + 5-phospho-alpha-D-ribose 1-diphosphate.","export":false,"pw_reaction_id":null,"source":null}],"signal_regions":"None","transmembrane_regions":"None","pdb_id":null,"cellular_location":null,"genbank_gene_id":null,"genbank_protein_id":null,"gene_card_id":"FUR1","chromosome_location":"chromosome 8","locus":"YHR128W","synonyms":["UPRTase","UMP pyrophosphorylase"],"enzyme_classes":["2.4.2.9"],"go_classes":[],"pfams":[],"pathways":[{"name":"Pyrimidine metabolism","kegg_map_id":"00240"}],"gene_sequence":"ATGTCTTCGGAACCATTTAAGAACGTCTACTTGCTACCTCAAACAAACCAATTGCTGGGTTTGTACACCATCATCAGAAATAAGAATACAACTAGACCTGATTTCATTTTCTACTCCGATAGAATCATCAGATTGTTGGTTGAAGAAGGTTTGAACCATCTACCTGTGCAAAAGCAAATTGTGGAAACTGACACCAACGAAAACTTCGAAGGTGTCTCATTCATGGGTAAAATCTGTGGTGTTTCCATTGTCAGAGCTGGTGAATCGATGGAGCAAGGATTAAGAGACTGTTGTAGGTCTGTGCGTATCGGTAAAATTTTAATTCAAAGGGACGAGGAGACTGCTTTACCAAAGTTATTCTACGAAAAATTACCAGAGGATATATCTGAAAGGTATGTCTTCCTATTAGACCCAATGCTGGCCACCGGTGGTAGTGCTATCATGGCTACAGAAGTCTTGATTAAGAGAGGTGTTAAGCCAGAGAGAATTTACTTCTTAAACCTAATCTGTAGTAAGGAAGGGATTGAAAAATACCATGCCGCCTTCCCAGAGGTCAGAATTGTTACTGGTGCCCTCGACAGAGGTCTAGATGAAAACAAGTATCTAGTTCCAGGGTTGGGTGACTTTGGTGACAGATACTACTGTGTTTAA","protein_sequence":"MSSEPFKNVYLLPQTNQLLGLYTIIRNKNTTRPDFIFYSDRIIRLLVEEGLNHLPVQKQIVETDTNENFEGVSFMGKICGVSIVRAGESMEQGLRDCCRSVRIGKILIQRDEETALPKLFYEKLPEDISERYVFLLDPMLATGGSAIMATEVLIKRGVKPERIYFLNLICSKEGIEKYHAAFPEVRIVTGALDRGLDENKYLVPGLGDFGDRYYCV"}]}