Home
Browse
Metabolite Browse
Protein Browse
Reaction Browse
Pathway Browse
Class Browse
Search
Chem Query
Text Query
Sequence Search
Data Extractor
MS Spectra Search
MS/MS Spectra Search
GC/MS Spectra Search
NMR Spectra Search
2D NMR Spectra Search
About
About YMDB
Whats New
Other Databases
Data Sources
Statistics
Help
Citing YMDB
Documentation
Searching YMDB
Downloads
Contact Us
Search:
Search for:
Metabolites
Proteins
Term:
Field:
Any
YMDB ID
Metabolite Name
CAS Number
Cellular Location
ChEBI ID
Chemical Formula
Chemical IUPAC Name
Description
Formal Charge
H
2
O Solubility (experimental)
H
2
O Solubility (predicted)
InChI Identifier
InChI Key
KEGG Compound ID
LogP (experimental)
LogP (predicted)
Melting Point (°C)
Metabolite Synonyms
Molecular Weight (average)
Molecular Weight (monoisotopic)
PubChem Compound ID
SMILES
State
Synthesis Reference
Traditional IUPAC Name
Wikipedia Link
pKa
Any
Chromosome Location
GO Classification
GenBank Gene ID
GenBank Protein ID
Gene Name
GeneCard ID
General Function
Location
Locus
Molecular Weight
Number of Residues
PDB Accession
Pathways
Pfam Domain Function Identifier
Pfam Domain Function Name
Protein ID
Protein Name
Signals
Specific Function
Synonyms
Theoretical pI
Transmembrane Regions
UniProt ID
UniProt Name
help
Sequence Search
Enter DNA or amino acid query sequence(s) in
FASTA Format
below:
BLAST Parameters:
Perform gapped alignment
Lower case filtering of FASTA sequence
Filter query sequence (DUST & SEG)
Expectation value
Cost to open a gap (-1 for blast default)
Cost to extend a gap (-1 for blast default)
Penalty for nucleotide/amino acid mismatch
Reward for nucleotide/amino acid match