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xylitol degradation

SourceIDPathway
PathWhizPW002433 ThumbThumb?image type=greyscaleThumb?image type=simple

Pathway Metabolites

YMDB ID Name
CAS Number
IUPAC Name Formula
Weight
Structure
YMDB00109Adenosine triphosphate
56-65-5
({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acidC10H16N5O13P3
507.181
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YMDB00110NAD
53-84-9
1-[(2R,3R,4S,5R)-5-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1lambda5-pyridin-1-yliumC21H28N7O14P2
664.433
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YMDB00115D-Glyceraldehyde 3-phosphate
142-10-9
(2-hydroxy-3-oxopropoxy)phosphonic acidC3H7O6P
170.0578
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YMDB00119D-Ribose 5-phosphate
3615-55-2
{[(2R,3S,4R)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acidC5H11O8P
230.1098
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YMDB00143NADH
58-68-4
[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3S,4R,5R)-5-(3-carbamoyl-1,4-dihydropyridin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy})phosphinic acidC21H29N7O14P2
665.441
Thumb
YMDB00161D-Xylulose
551-84-8
(3S,4R)-1,3,4,5-tetrahydroxypentan-2-oneC5H10O5
150.1299
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YMDB00196D-Sedoheptulose 7-phosphate
2646-35-7
{[(2R,3S,4R,5S)-3,4,5,6-tetrahydroxy-6-(hydroxymethyl)oxan-2-yl]methoxy}phosphonic acidC7H15O10P
290.1618
Thumb
YMDB00223D-Erythrose 4-phosphate
585-18-2
[(2R,3R)-2,3-dihydroxy-4-oxobutoxy]phosphonic acidC4H9O7P
200.0838
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YMDB00362Xylulose 5-phosphate
4212-65-1
{[(2R,3S)-2,3,5-trihydroxy-4-oxopentyl]oxy}phosphonic acidC5H11O8P
230.1098
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YMDB00373D-Xylitol
87-99-0
C5H12O5
152.1458
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YMDB00426NADPH
53-57-6
{[(2R,3R,4R,5R)-2-(6-amino-9H-purin-9-yl)-5-[({[({[(2R,3S,4R,5R)-5-(3-carbamoyl-1,4-dihydropyridin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-4-hydroxyoxolan-3-yl]oxy}phosphonic acidC21H30N7O17P3
745.4209
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YMDB00427NADP
53-59-8
1-[(2R,3R,4S,5R)-5-[({[({[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1lambda5-pyridin-1-yliumC21H29N7O17P3
744.4129
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YMDB00650alpha-D-ribose 5-phosphate
4300-28-1
{[(2R,3S,4R,5S)-3,4,5-trihydroxyoxolan-2-yl]methoxy}phosphonic acidC5H11O8P
230.1098
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YMDB00752Sedoheptulose 7-phosphate
2646-35-7
{[(2R,3R,4R,5S)-2,3,4,5,7-pentahydroxy-6-oxoheptyl]oxy}phosphonic acidC7H15O10P
290.1618
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YMDB00778Xylitol
87-99-0
(2R,4S)-pentane-1,2,3,4,5-pentolC5H12O5
152.1458
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YMDB00779aldehydo-D-Xylose
58-86-6
(3R,4S,5R)-oxane-2,3,4,5-tetrolC5H10O5
150.1299
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YMDB00862hydron
12408-02-5
hydronH
1.00794
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YMDB00914ADP
58-64-0
[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acidC10H15N5O10P2
427.2011
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YMDB00948D-ribulose 5-phosphate
4151-19-3
{[(2R,3R)-2,3,5-trihydroxy-4-oxopentyl]oxy}phosphonic acidC5H11O8P
230.1098
Thumb
YMDB16262β-D-fructofuranose 6-phosphate[3,4,5-trihydroxy-5-(hydroxymethyl)oxolan-2-yl]methyl phosphateC6H11O9P
258.12
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Pathway Proteins

Uniprot ID Gene Name
Locus
Name Type Metabolites
P33315TKL2
YBR117C
Transketolase 2Enzyme
P53228NQM1
YGR043C
Transaldolase NQM1Enzyme
P23254TKL1
YPR074C
Transketolase 1Enzyme
P42826XKS1
YGR194C
Xylulose kinaseEnzyme
Q07993XYL2
YLR070C
D-xylulose reductaseEnzyme
P38715GRE3
YHR104W
NADPH-dependent aldose reductase GRE3Enzyme
Q12189RKI1
YOR095C
Ribose-5-phosphate isomeraseEnzyme
P46969RPE1
YJL121C
Ribulose-phosphate 3-epimeraseEnzyme
P15019TAL1
TransaldolaseEnzyme