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Vitamin B6

SourceIDPathway
PathWhizPW002488 ThumbThumb?image type=greyscaleThumb?image type=simple

Pathway Metabolites

YMDB ID Name
CAS Number
IUPAC Name Formula
Weight
Structure
YMDB00037Pyridoxine
65-23-6
4,5-bis(hydroxymethyl)-2-methylpyridin-3-olC8H11NO3
169.1778
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YMDB00109Adenosine triphosphate
56-65-5
({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acidC10H16N5O13P3
507.181
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YMDB00110NAD
53-84-9
1-[(2R,3R,4S,5R)-5-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1lambda5-pyridin-1-yliumC21H28N7O14P2
664.433
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YMDB00115D-Glyceraldehyde 3-phosphate
142-10-9
(2-hydroxy-3-oxopropoxy)phosphonic acidC3H7O6P
170.0578
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YMDB00143NADH
58-68-4
[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3S,4R,5R)-5-(3-carbamoyl-1,4-dihydropyridin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy})phosphinic acidC21H29N7O14P2
665.441
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YMDB00153Oxoglutaric acid
328-50-7
2-oxopentanedioic acidC5H6O5
146.0981
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YMDB00175Pyruvic acid
127-17-3
2-oxopropanoic acidC3H4O3
88.0621
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YMDB00223D-Erythrose 4-phosphate
585-18-2
[(2R,3R)-2,3-dihydroxy-4-oxobutoxy]phosphonic acidC4H9O7P
200.0838
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YMDB00271L-Glutamic acid
56-86-0
(2S)-2-aminopentanedioic acidC5H9NO4
147.1293
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YMDB00355O-Phospho-4-hydroxy-L-threonine(2S,3S)-2-amino-3-hydroxy-4-(phosphonooxy)butanoic acidC4H10NO7P
215.0985
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YMDB00363Pyridoxal 5'-phosphate
54-47-7
[(4-formyl-5-hydroxy-6-methylpyridin-3-yl)methoxy]phosphonic acidC8H10NO6P
247.1419
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YMDB003842-Oxo-3-hydroxy-4-phosphobutanoic acid(3R)-3-hydroxy-2-oxo-4-(phosphonooxy)butanoic acidC4H7O8P
214.0673
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YMDB00392Pyridoxal
66-72-8
3-hydroxy-5-(hydroxymethyl)-2-methylpyridine-4-carbaldehydeC8H9NO3
167.162
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YMDB00397Pyridoxamine 5'-phosphate
529-96-4
{[4-(aminomethyl)-5-hydroxy-6-methylpyridin-3-yl]methoxy}phosphonic acidC8H13N2O5P
248.173
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YMDB00407Pyridoxine 5'-phosphate
447-05-2
{[5-hydroxy-4-(hydroxymethyl)-6-methylpyridin-3-yl]methoxy}phosphonic acidC8H12NO6P
249.1577
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YMDB00423Ammonium
14798-03-9
azaniumH4N
18.0385
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YMDB004944-Hydroxy-L-threonine
21768-45-6
(2S,3S)-2-amino-3,4-dihydroxybutanoic acidC4H9NO4
135.1186
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YMDB00862hydron
12408-02-5
hydronH
1.00794
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YMDB00888Hydrogen peroxide
7722-84-1
peroxolH2O2
34.0147
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YMDB00889Pyridoxamine
85-87-0
4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-olC8H12N2O2
168.1931
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YMDB00890water
7732-18-5
waterH2O
18.0153
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YMDB00900oxygen
7782-44-7
oxidanoneO2
31.9988
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YMDB00907phosphate
14265-44-2
phosphoric acidO4P
94.9714
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YMDB00912Carbon dioxide
124-38-9
methanedioneCO2
44.0095
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YMDB00914ADP
58-64-0
[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acidC10H15N5O10P2
427.2011
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YMDB161142-Amino-3-phosphonopropionic acid2-amino-3-phosphonopropanoic acidC3H8NO5P
169.0731
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YMDB161351-Deoxy-D-xylulose 5-phosphate{[(2R,3S)-2,3-dihydroxy-4-oxopentyl]oxy}phosphonic acidC5H11O7P
214.1104
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YMDB162672-Amino-3-oxo-4-phosphonooxybutyrate(2S)-2-amino-3-oxo-4-(phosphonooxy)butanoic acidC4H8NO7P
213.0826
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YMDB162684-Phospho-D-erythronate(2R,3R)-2,3-dihydroxy-4-(phosphonooxy)butanoic acidC4H9O8P
216.0832
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Pathway Proteins

Uniprot ID Gene Name
Locus
Name Type Metabolites
P00360TDH1
YJL052W
Glyceraldehyde-3-phosphate dehydrogenase 1Enzyme
P0CT22
Formate dehydrogenase 2