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Pentose and glucuronate interconversions
| Source | ID | Pathway |
|---|---|---|
| KEGG | 00040 |  |
Pathway Metabolites
| YMDB ID | Name CAS Number | IUPAC Name | Formula Weight | Structure |
|---|---|---|---|---|
| YMDB00115 | D-Glyceraldehyde 3-phosphate 142-10-9 | (2-hydroxy-3-oxopropoxy)phosphonic acid | C3H7O6P 170.0578 |  |
| YMDB00153 | Oxoglutaric acid 328-50-7 | 2-oxopentanedioic acid | C5H6O5 146.0981 |  |
| YMDB00161 | D-Xylulose 551-84-8 | (3S,4R)-1,3,4,5-tetrahydroxypentan-2-one | C5H10O5 150.1299 |  |
| YMDB00175 | Pyruvic acid 127-17-3 | 2-oxopropanoic acid | C3H4O3 88.0621 |  |
| YMDB00212 | Uridine diphosphate glucose 133-89-1 | [({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid | C15H24N2O17P2 566.3018 |  |
| YMDB00288 | Glucose 1-phosphate 59-56-3 | {[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00322 | Dihydroxyacetone phosphate 57-04-5 | (3-hydroxy-2-oxopropoxy)phosphonic acid | C3H7O6P 170.0578 |  |
| YMDB00343 | Glycolaldehyde 141-46-8 | 2-hydroxyacetaldehyde | C2H4O2 60.052 |  |
| YMDB00362 | Xylulose 5-phosphate 4212-65-1 | {[(2R,3S)-2,3,5-trihydroxy-4-oxopentyl]oxy}phosphonic acid | C5H11O8P 230.1098 |  |
| YMDB00373 | D-Xylitol 87-99-0 | C5H12O5 152.1458 |  | |
| YMDB00383 | Gluconic acid 526-95-4 | (2R,3S,4R,5R)-2,3,4,5,6-pentahydroxyhexanoic acid | C6H12O7 196.1553 |  |
| YMDB00415 | UDP-D-glucose 133-89-1 | [({[(2R,3S,4R,5R)-5-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy})phosphinic acid | C15H24N2O17P2 566.3018 |  |
| YMDB00591 | L-arabinitol 7643-75-6 | (2S,4S)-pentane-1,2,3,4,5-pentol | C5H12O5 152.1458 |  |
| YMDB00674 | aldehydo-D-galacturonate 685-73-4 | (2S,3R,4S,5R)-2,3,4,5-tetrahydroxy-6-oxohexanoic acid | C6H10O7 194.1394 |  |
| YMDB00778 | Xylitol 87-99-0 | (2R,4S)-pentane-1,2,3,4,5-pentol | C5H12O5 152.1458 |  |
| YMDB00779 | aldehydo-D-Xylose 58-86-6 | (3R,4S,5R)-oxane-2,3,4,5-tetrol | C5H10O5 150.1299 |  |
| YMDB00827 | D-gluconate 59625-89-7 | C6H11O7 195.1473 |  | |
| YMDB00867 | CDP-ribitol 3506-17-0 | {[(2R,3S,4R,5R)-5-(4-amino-2-oxo-1,2-dihydropyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}({[hydroxy({[(2R,3S,4S)-2,3,4,5-tetrahydroxypentyl]oxy})phosphoryl]oxy})phosphinic acid | C14H25N3O15P2 537.3069 |  |
| YMDB00893 | L-Arabinose 5328-37-0 | (3R,4S,5S)-oxane-2,3,4,5-tetrol | C5H10O5 150.1299 |  |
| YMDB00904 | Pectin 9000-69-5 | (2S,3R,4S,5R,6R)-3,4,5,6-tetrahydroxyoxane-2-carboxylic acid | C6H10O7 194.1394 |  |
| YMDB00948 | D-ribulose 5-phosphate 4151-19-3 | {[(2R,3R)-2,3,5-trihydroxy-4-oxopentyl]oxy}phosphonic acid | C5H11O8P 230.1098 |  |
| YMDB00970 | alpha-D-glucose 1-phosphate 59-56-3 | {[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy}phosphonic acid | C6H13O9P 260.1358 |  |
| YMDB00975 | gluconate 526-95-4 | C6H12O7 196.1553 |  | |
| YMDB01053 | pyruvate 127-17-3 | C3H3O3 87.0541 |  |
Pathway Proteins
| Uniprot ID | Gene Name Locus | Name | Type | Metabolites |
|---|---|---|---|---|
| P42826 | XKS1 YGR194C | Xylulose kinase | Enzyme | |
| Q07993 | XYL2 YLR070C | D-xylulose reductase | Enzyme | |
| P38715 | GRE3 YHR104W | NADPH-dependent aldose reductase GRE3 | Enzyme | |
| P38709 | YHL012W | Probable UTP--glucose-1-phosphate uridylyltransferase | Enzyme | |
| P32861 | UGP1 YKL035W | UTP--glucose-1-phosphate uridylyltransferase | Enzyme | |
| P46969 | RPE1 YJL121C | Ribulose-phosphate 3-epimerase | Enzyme | |
| P47180 | PGU1 YJR153W | Polygalacturonase | Enzyme |