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Nitrogen metabolism

SourceIDPathway
PathWhizPW002504 ThumbThumb?image type=greyscaleThumb?image type=simple
KEGG00910 Map00910

Pathway Metabolites

YMDB ID Name
CAS Number
IUPAC Name Formula
Weight
Structure
YMDB00002L-Glutamine
56-85-9
(2S)-2-amino-4-carbamoylbutanoic acidC5H10N2O3
146.1445
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YMDB00016Glycine
56-40-6
2-aminoacetic acidC2H5NO2
75.0666
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YMDB00026Isocitric acid
320-77-4
1-hydroxypropane-1,2,3-tricarboxylic acidC6H8O7
192.1235
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YMDB00082Carbamoylphosphate
590-55-6
(carbamoyloxy)phosphonic acidCH4NO5P
141.0199
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YMDB00091Ammonia
7664-41-7
ammoniaH3N
17.0305
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YMDB00109Adenosine triphosphate
56-65-5
({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)phosphonic acidC10H16N5O13P3
507.181
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YMDB00110NAD
53-84-9
1-[(2R,3R,4S,5R)-5-[({[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1λ⁵-pyridin-1-yliumC21H28N7O14P2
664.433
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YMDB00135Nitrite
14797-65-0
nitriteNO2
46.0055
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YMDB00143NADH
58-68-4
[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]({[(2R,3S,4R,5R)-5-(3-carbamoyl-1,4-dihydropyridin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy})phosphinic acidC21H29N7O14P2
665.441
Thumb
YMDB00153Oxoglutaric acid
328-50-7
2-oxopentanedioic acidC5H6O5
146.0981
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YMDB00226L-Asparagine
70-47-3
(2S)-2-amino-3-carbamoylpropanoic acidC4H8N2O3
132.1179
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YMDB00271L-Glutamic acid
56-86-0
(2S)-2-aminopentanedioic acidC5H9NO4
147.1293
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YMDB00382Carbonic acid
463-79-6
carbonic acidCH2O3
62.0248
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YMDB00385Formic acid
64-18-6
formic acidCH2O2
46.0254
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YMDB00426NADPH
53-57-6
{[(2R,3R,4R,5R)-2-(6-amino-9H-purin-9-yl)-5-[({[({[(2R,3S,4R,5R)-5-(3-carbamoyl-1,4-dihydropyridin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-4-hydroxyoxolan-3-yl]oxy}phosphonic acidC21H30N7O17P3
745.4209
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YMDB00427NADP
53-59-8
1-[(2R,3R,4S,5R)-5-[({[({[(2R,3R,4R,5R)-5-(6-amino-9H-purin-9-yl)-3-hydroxy-4-(phosphonooxy)oxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy](hydroxy)phosphoryl}oxy)methyl]-3,4-dihydroxyoxolan-2-yl]-3-carbamoyl-1λ⁵-pyridin-1-yliumC21H29N7O17P3
744.4129
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YMDB00862hydron
12408-02-5
hydronH
1.00794
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YMDB00890water
7732-18-5
waterH2O
18.0153
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YMDB00896L-Aspartic acid
56-84-8
(2S)-2-aminobutanedioic acidC4H7NO4
133.1027
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YMDB00907phosphate
14265-44-2
phosphoric acidO4P
94.9714
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YMDB00912Carbon dioxide
124-38-9
methanedioneCO2
44.0095
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YMDB00914ADP
58-64-0
[({[(2R,3S,4R,5R)-5-(6-amino-9H-purin-9-yl)-3,4-dihydroxyoxolan-2-yl]methoxy}(hydroxy)phosphoryl)oxy]phosphonic acidC10H15N5O10P2
427.2011
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YMDB00981Nitrate
14797-55-8
nitrateNO3
62.0049
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YMDB00982no
10102-43-9
nitrosoNO
30.0061
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YMDB01025formate
64-18-6
CHO2
45.0174
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Pathway Proteins

Uniprot ID Gene Name
Locus
Name Type Metabolites
P32288GLN1
YPR035W
Glutamine synthetaseEnzyme
P49089ASN1
YPR145W
Asparagine synthetase [glutamine-hydrolyzing] 1Enzyme
Q12680GLT1
YDL171C
Glutamate synthase [NADH]Enzyme
P49090ASN2
YGR124W
Asparagine synthetase [glutamine-hydrolyzing] 2Enzyme
P47177
YJR149W
Putative nitronate monooxygenaseEnzyme
P53982IDP3
YNL009W
Isocitrate dehydrogenase [NADP]Enzyme
P21954IDP1
YDL066W
Isocitrate dehydrogenase [NADP], mitochondrialEnzyme
P41939IDP2
YLR174W
Isocitrate dehydrogenase [NADP] cytoplasmicEnzyme
P31373CYS3
YAL012W
Cystathionine gamma-lyaseEnzyme
P33327GDH2
YDL215C
NAD-specific glutamate dehydrogenaseEnzyme
P11163ASP3-1
YLR155C
L-asparaginase 2Enzyme
P39708GDH3
YAL062W
NADP-specific glutamate dehydrogenase 2Enzyme
P48015GCV1
YDR019C
Aminomethyltransferase, mitochondrialEnzyme
P38986ASP1
YDR321W
L-asparaginase 1Enzyme
P07262GDH1
YOR375C
NADP-specific glutamate dehydrogenase 1Enzyme
P53101STR3
YGL184C
Cystathionine beta-lyaseEnzyme
P43623IRC7
YFR055W
Putative cystathionine beta-lyaseEnzyme
P53615NCE103
YNL036W
Carbonic anhydraseEnzyme