{"ymdb_id":"YMDB02303","created_at":"2012-06-08T16:16:55.000Z","updated_at":"2016-09-08T18:37:48.000Z","name":"Cadaverine","cas":"462-94-2","state":"Liquid","melting_point":"9 oC","description":"Cadaverine is a foul-smelling diamine formed by bacterial decarboxylation of lysine that occurs during protein hydrolysis during putrefaction of animal tissue. However, this diamine is not purely associated with putrefaction. It is also produced in small quantities by mammals.","experimental_water_solubility":null,"experimental_logp_hydrophobicity":null,"location":null,"synthesis_reference":null,"chebi_id":"18127","hmdb_id":"HMDB02322","kegg_id":"C01672","pubchem_id":"273","cs_id":null,"foodb_id":null,"wikipedia_link":null,"biocyc_id":null,"iupac":"pentane-1,5-diamine","traditional_iupac":"cadaverine","logp":"-0.4005515990000003","pka":null,"alogps_solubility":"8.91e+01 g/l","alogps_logp":"-0.27","alogps_logs":"-0.06","acceptor_count":"2","donor_count":"2","rotatable_bond_count":"4","polar_surface_area":"52.04","refractivity":"31.979599999999998","polarizability":"13.112767429733221","formal_charge":"0","physiological_charge":"2","pka_strongest_basic":"10.506503804690274","pka_strongest_acidic":null,"bioavailability":"1","number_of_rings":"0","rule_of_five":"1","ghose_filter":"0","veber_rule":"0","mddr_like_rule":"0","synonyms":[" 1,5-Diaminopentane dihydrochloride"," 1,5-Pentamethylenediamine"," 1,5-Pentanediamine"," Cadaverin"," Cadaverine dihydrochloride"," Pentamethylenediamine"," Pentamethylenediamine dihydrochloride"," Pentane-1,5-diamine","1,5-Diaminopentane"],"pathways":[],"growth_conditions":[],"references":[{"pubmed_id":17439666,"citation":"Castrillo, J. I., Zeef, L. A., Hoyle, D. C., Zhang, N., Hayes, A., Gardner, D. C., Cornell, M. J., Petty, J., Hakes, L., Wardleworth, L., Rash, B., Brown, M., Dunn, W. B., Broadhurst, D., O'Donoghue, K., Hester, S. S., Dunkley, T. P., Hart, S. R., Swainston, N., Li, P., Gaskell, S. J., Paton, N. W., Lilley, K. S., Kell, D. B., Oliver, S. G. (2007). \"Growth control of the eukaryote cell: a systems biology study in yeast.\" J Biol 6:4."}],"proteins":[]}