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Identification |
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YMDB ID | YMDB00147 |
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Name | 2,5-Diamino-4-hydroxy-6-(5-phosphoribosylamino)pyrimidine |
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Species | Saccharomyces cerevisiae |
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Strain | Baker's yeast |
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Description | 2,5-Diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one is an intermediate in flavin biosynthesis pathway. Riboflavin (vitamin B2) is the precursor for the essential flavin cofactors FMN and FAD, which are used in a wide variety of redox reactions. [Biocyc PWY-6168] |
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Structure | |
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Synonyms | - 2,5-Diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one
- 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine
- 2,5-Diamino-6-hydroxy-4-(5'-phosphoribosylamino)-pyrimidine
- N-(2,5-diamino-6-hydroxypyrimidin-4-yl)-5-O-phosphono-beta-D-ribofuranosylamine
- N-(2,5-diamino-6-Hydroxypyrimidin-4-yl)-5-O-phosphono-b-D-ribofuranosylamine
- N-(2,5-diamino-6-Hydroxypyrimidin-4-yl)-5-O-phosphono-β-D-ribofuranosylamine
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CAS number | Not Available |
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Weight | Average: 353.2258 Monoisotopic: 353.073649025 |
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InChI Key | OCLCLRXKNJCOJD-UMMCILCDSA-N |
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InChI | InChI=1S/C9H16N5O8P/c10-3-6(13-9(11)14-7(3)17)12-8-5(16)4(15)2(22-8)1-21-23(18,19)20/h2,4-5,8,15-16H,1,10H2,(H2,18,19,20)(H4,11,12,13,14,17)/t2-,4-,5-,8-/m1/s1 |
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IUPAC Name | {[(2R,3S,4R,5R)-5-[(2,5-diamino-6-oxo-1,6-dihydropyrimidin-4-yl)amino]-3,4-dihydroxyoxolan-2-yl]methoxy}phosphonic acid |
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Traditional IUPAC Name | APy |
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Chemical Formula | C9H16N5O8P |
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SMILES | NC1=NC(N[C@@H]2O[C@H](COP(O)(O)=O)[C@@H](O)[C@H]2O)=C(N)C(O)=N1 |
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Chemical Taxonomy |
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Description | This compound belongs to the class of organic compounds known as glycosylamines. These are compounds consisting of an amine with a beta-N-glycosidic bond to a carbohydrate, thus forming a cyclic hemiaminal ether bond (alpha-amino ether). |
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Kingdom | Organic compounds |
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Super Class | Organooxygen compounds |
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Class | Carbohydrates and carbohydrate conjugates |
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Sub Class | Glycosyl compounds |
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Direct Parent | Glycosylamines |
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Alternative Parents | |
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Substituents | - N-glycosyl compound
- Monosaccharide phosphate
- Hydroxypyrimidine
- Monoalkyl phosphate
- Secondary aliphatic/aromatic amine
- Aminopyrimidine
- Alkyl phosphate
- Pyrimidine
- Primary aromatic amine
- Phosphoric acid ester
- Organic phosphoric acid derivative
- Organic phosphate
- Monosaccharide
- Hydropyrimidine
- Heteroaromatic compound
- Oxolane
- Secondary alcohol
- 1,2-diol
- Oxacycle
- Azacycle
- Organoheterocyclic compound
- Secondary amine
- Hydrocarbon derivative
- Primary amine
- Organonitrogen compound
- Amine
- Alcohol
- Aromatic heteromonocyclic compound
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Molecular Framework | Aromatic heteromonocyclic compounds |
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External Descriptors | |
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Physical Properties |
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State | Not Available |
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Charge | 0 |
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Melting point | Not Available |
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Experimental Properties | Property | Value | Reference |
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Water Solubility | Not Available | PhysProp | LogP | Not Available | PhysProp |
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Predicted Properties | |
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Biological Properties |
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Cellular Locations | |
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Organoleptic Properties | Not Available |
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SMPDB Pathways | |
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KEGG Pathways | |
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SMPDB Reactions | Not Available |
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KEGG Reactions | |
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Concentrations |
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Intracellular Concentrations | Not Available |
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Extracellular Concentrations | Not Available |
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Spectra |
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Spectra |
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References |
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References: | - UniProt Consortium (2011). "Ongoing and future developments at the Universal Protein Resource." Nucleic Acids Res 39:D214-D219.21051339
- Herrgard, M. J., Swainston, N., Dobson, P., Dunn, W. B., Arga, K. Y., Arvas, M., Bluthgen, N., Borger, S., Costenoble, R., Heinemann, M., Hucka, M., Le Novere, N., Li, P., Liebermeister, W., Mo, M. L., Oliveira, A. P., Petranovic, D., Pettifer, S., Simeonidis, E., Smallbone, K., Spasic, I., Weichart, D., Brent, R., Broomhead, D. S., Westerhoff, H. V., Kirdar, B., Penttila, M., Klipp, E., Palsson, B. O., Sauer, U., Oliver, S. G., Mendes, P., Nielsen, J., Kell, D. B. (2008). "A consensus yeast metabolic network reconstruction obtained from a community approach to systems biology." Nat Biotechnol 26:1155-1160.18846089
- Richter, G., Fischer, M., Krieger, C., Eberhardt, S., Luttgen, H., Gerstenschlager, I., Bacher, A. (1997). "Biosynthesis of riboflavin: characterization of the bifunctional deaminase-reductase of Escherichia coli and Bacillus subtilis." J Bacteriol 179:2022-2028.9068650
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Synthesis Reference: | Not Available |
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External Links: | Resource | Link |
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CHEBI ID | 29114 | HMDB ID | Not Available | Pubchem Compound ID | 439480 | Kegg ID | C01304 | ChemSpider ID | 388579 | FOODB ID | Not Available | Wikipedia ID | Not Available | BioCyc ID | Not Available |
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